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Sed0004258 (gene) of Chayote v1 genome

Gene IDSed0004258
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:546931..547436
RNA-Seq ExpressionSed0004258
SyntenySed0004258
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025373.1 hypothetical protein E6C27_scaffold1204G00600 [Cucumis melo var. makuwa]5.7e-2767.78Show/hide
Query:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWSAVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAYPDRLSLPSGVA
        MKIQF  F AI+++LAN + L+ CRTMKDD + WS ++QQSLQRAPVPPS ++GD+NIPVPLGQ+AFAGK T PPAF  PD L +PSGVA
Subjt:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWSAVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAYPDRLSLPSGVA
KAG6571503.1 hypothetical protein SDJN03_28231, partial [Cucurbita argyrosperma subsp. sororia]8.5e-2364.84Show/hide
Query:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWS-AVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAYPDRLSLPSGVA
        MKIQFA  LAI++VLAN ++L+ CRTMK+D Q WS  +LQQSLQRAPVPPSAKNG + IPVPLGQR+F GK T  PA +Y  ++ +P GVA
Subjt:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWS-AVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAYPDRLSLPSGVA
KAG6571504.1 hypothetical protein SDJN03_28232, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2363.16Show/hide
Query:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWS-AVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAYPDRLSLPSGVAFIKT
        MKIQFA  LAI++VLAN ++L+ CRTMK+D Q WS  +LQQSLQRAPVPP+AKNG + IP PLGQRAF GK T  PA +Y  ++ +P GVA +KT
Subjt:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWS-AVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAYPDRLSLPSGVAFIKT
KAG6571505.1 hypothetical protein SDJN03_28233, partial [Cucurbita argyrosperma subsp. sororia]5.3e-2567.78Show/hide
Query:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWSAVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAYPDRLSLPSGVA
        MKIQFA  LAIV++LAN ++L+ CRTMKDD Q WS +LQQSLQRAPVPPSAKNG + IPVPLGQRAF GK T  PA +Y  ++ +P GVA
Subjt:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWSAVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAYPDRLSLPSGVA
KAG6571506.1 hypothetical protein SDJN03_28234, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2773.33Show/hide
Query:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWSAVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAYPDRLSLPSGVA
        MKIQFA  LAI LVLAN ++L+ CR MK D Q WS VLQQSLQRAPVPPS K+G + IPVPLG+RAFAGKF APPA AYPD L +PSGVA
Subjt:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWSAVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAYPDRLSLPSGVA
TrEMBL top hitse value%identityAlignment
A0A061DNY2 Uncharacterized protein4.3e-0439.13Show/hide
Query:  MFLAIVLVLANTNKLEGCRTMKDDLQSWSAVLQQSLQRAPVPPSAKNGDSNIPVPLG-----QRAFAGKFTAPPAFAYPDRLSLPSGVAFIK
        +F+  V  L +T+  E  R + +D+     ++ QSLQ+ PVPPS +NG +NIP   G      RAFAG   APP    PD +SL    A +K
Subjt:  MFLAIVLVLANTNKLEGCRTMKDDLQSWSAVLQQSLQRAPVPPSAKNGDSNIPVPLG-----QRAFAGKFTAPPAFAYPDRLSLPSGVAFIK
A0A0A0LCY5 Uncharacterized protein2.5e-2067.07Show/hide
Query:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWS---AVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAY
        MKIQF+  LAI+++LANT+ L+ CRT+KDD Q+WS    +LQQSLQR PVPPSAKNGD+NIPVP+GQRAFAGK +A  A  Y
Subjt:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWS---AVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAY
A0A5D3B777 Uncharacterized protein2.7e-2767.78Show/hide
Query:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWSAVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAYPDRLSLPSGVA
        MKIQF  F AI+++LAN + L+ CRTMKDD + WS ++QQSLQRAPVPPS ++GD+NIPVPLGQ+AFAGK T PPAF  PD L +PSGVA
Subjt:  MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWSAVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAYPDRLSLPSGVA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCCAATTTGCTATGTTTTTAGCCATTGTGCTTGTGCTTGCCAACACTAATAAGCTCGAAGGTTGCAGAACCATGAAGGATGATCTTCAAAGCTGGTCGGCGGT
GCTTCAACAGTCGCTGCAAAGAGCGCCGGTTCCGCCCTCCGCCAAAAACGGCGACTCGAACATTCCGGTACCGCTCGGACAACGGGCCTTCGCCGGAAAATTCACGGCGC
CGCCGGCGTTCGCCTACCCGGATCGTCTCTCGCTCCCTTCTGGTGTGGCCTTCATCAAGACAATTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATTCAACAATCTCCATAAAAAAAAAACCCATCTTTTATTTTCCTCCAAAAATGAAGATCCAATTTGCTATGTTTTTAGCCATTGTGCTTGTGCTTGCCAACACTAATAAG
CTCGAAGGTTGCAGAACCATGAAGGATGATCTTCAAAGCTGGTCGGCGGTGCTTCAACAGTCGCTGCAAAGAGCGCCGGTTCCGCCCTCCGCCAAAAACGGCGACTCGAA
CATTCCGGTACCGCTCGGACAACGGGCCTTCGCCGGAAAATTCACGGCGCCGCCGGCGTTCGCCTACCCGGATCGTCTCTCGCTCCCTTCTGGTGTGGCCTTCATCAAGA
CAATTAATTAATTAATTACACAAAATATACATATATGCATGGGATTTTCTTTTTTTATAATTTGTTTTATTTTTTTTCCTTTCTCAATTTCAGCAAATCATAATATGGCA
AGTGGGATATAGGAGTCTTGAAATTTGTAATTCATTTATTTATATTTGGGAAATGACATTAATTCA
Protein sequenceShow/hide protein sequence
MKIQFAMFLAIVLVLANTNKLEGCRTMKDDLQSWSAVLQQSLQRAPVPPSAKNGDSNIPVPLGQRAFAGKFTAPPAFAYPDRLSLPSGVAFIKTIN