; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004268 (gene) of Chayote v1 genome

Gene IDSed0004268
OrganismSechium edule (Chayote v1)
DescriptionAlba domain-containing protein
Genome locationLG08:5275895..5278351
RNA-Seq ExpressionSed0004268
SyntenySed0004268
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150019.1 uncharacterized protein At2g34160 [Cucumis sativus]1.4e-5796.15Show/hide
Query:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEI EGVNSI LT+D QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDDLMAAAAEERENEDGEEQS
        EIVLGKTENFD+LMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDDLMAAAAEERENEDGEEQS

XP_022924689.1 uncharacterized protein At2g34160-like [Cucurbita moschata]3.2e-5796.15Show/hide
Query:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEI EGVNSIALT+D QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDDLMAAAAEERENEDGEEQS
        EIVLGKTENFD+LMAAAAEEREN DGEEQS
Subjt:  EIVLGKTENFDDLMAAAAEERENEDGEEQS

XP_022961070.1 uncharacterized protein At2g34160-like [Cucurbita moschata]4.9e-5896.92Show/hide
Query:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEI EGVNSIALT+D QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDDLMAAAAEERENEDGEEQS
        EIVLGKTENFD+LMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDDLMAAAAEERENEDGEEQS

XP_022972044.1 uncharacterized protein At2g34160-like [Cucurbita maxima]3.2e-5796.15Show/hide
Query:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEI EGVNSIALT+D QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDDLMAAAAEERENEDGEEQS
        EIVLGKTENFD+LMAAAAEEREN DGEEQS
Subjt:  EIVLGKTENFDDLMAAAAEERENEDGEEQS

XP_022987902.1 uncharacterized protein At2g34160-like [Cucurbita maxima]1.9e-5796.15Show/hide
Query:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEI EGVNSIALT+D QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDDLMAAAAEERENEDGEEQS
        EIVLGKTENFD+LMAAA EERENEDGEEQS
Subjt:  EIVLGKTENFDDLMAAAAEERENEDGEEQS

TrEMBL top hitse value%identityAlignment
A0A0A0LZB6 Alba domain-containing protein6.9e-5896.15Show/hide
Query:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEI EGVNSI LT+D QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDDLMAAAAEERENEDGEEQS
        EIVLGKTENFD+LMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDDLMAAAAEERENEDGEEQS

A0A1S3B8Y2 uncharacterized protein At2g34160-like6.9e-5896.15Show/hide
Query:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEI EGVNSI LT+D QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDDLMAAAAEERENEDGEEQS
        EIVLGKTENFD+LMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDDLMAAAAEERENEDGEEQS

A0A5A7TV88 Alba domain-containing protein6.9e-5896.15Show/hide
Query:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEI EGVNSI LT+D QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDDLMAAAAEERENEDGEEQS
        EIVLGKTENFD+LMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDDLMAAAAEERENEDGEEQS

A0A6J1CUJ0 uncharacterized protein At2g34160-like6.9e-5896.15Show/hide
Query:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEI EGVNSI LT+D QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDDLMAAAAEERENEDGEEQS
        EIVLGKTENFD+LMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDDLMAAAAEERENEDGEEQS

A0A6J1HAY2 uncharacterized protein At2g34160-like2.4e-5896.92Show/hide
Query:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEI EGVNSIALT+D QKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDDLMAAAAEERENEDGEEQS
        EIVLGKTENFD+LMAAAAEERENEDGEEQS
Subjt:  EIVLGKTENFDDLMAAAAEERENEDGEEQS

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341605.7e-4979.23Show/hide
Query:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEI +GVN++ L +D QKKNRIQVSNTKKPLFFYVNLAKRYMQQYN+VELSALGMAIATVVTV EILKNNG A+EKKIMTSTVDIKDD+RGRPVQKAKI
Subjt:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDDLMAAAAEERENEDGEEQS
        EI L K+E FD+LMAAA EE+E+ + + Q+
Subjt:  EIVLGKTENFDDLMAAAAEERENEDGEEQS

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein3.6e-5181.54Show/hide
Query:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEI EGVN++ L  D QKKNRIQVSNTKKPLFFYVNLAKRYMQQY +VELSALGMAIATVVTVAEILKNNG A+EKKIMTSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDDLMAAAAEERENEDGEEQS
        EI L K+E FD+LMAAA EE+E  + +EQ+
Subjt:  EIVLGKTENFDDLMAAAAEERENEDGEEQS

AT2G34160.1 Alba DNA/RNA-binding protein4.0e-5079.23Show/hide
Query:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI
        MEEI +GVN++ L +D QKKNRIQVSNTKKPLFFYVNLAKRYMQQYN+VELSALGMAIATVVTV EILKNNG A+EKKIMTSTVDIKDD+RGRPVQKAKI
Subjt:  MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDDLMAAAAEERENEDGEEQS
        EI L K+E FD+LMAAA EE+E+ + + Q+
Subjt:  EIVLGKTENFDDLMAAAAEERENEDGEEQS

AT3G04620.1 Alba DNA/RNA-binding protein1.3e-3764.75Show/hide
Query:  IAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIV
        +A    +   T +  KKNRIQVSNTKKPLFFYVNLAKRY+QQ+NEVELSALGMAI TVVT++EILKNNGLA EKK++TSTV +KD+++G+ VQKAKIEIV
Subjt:  IAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIV

Query:  LGKTENFDDLMAAAAEERENED
        LGK++ FD L+      +  E+
Subjt:  LGKTENFDDLMAAAAEERENED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGATAGCGGAGGGCGTCAACTCCATCGCCTTGACCTCTGATTTGCAGAAGAAGAATCGGATTCAAGTCTCCAACACCAAGAAGCCCCTCTTCTTCTATGTTAA
TCTCGCCAAGAGGTATATGCAGCAGTACAATGAGGTCGAGCTTTCTGCGCTTGGAATGGCCATTGCAACTGTTGTGACTGTTGCAGAAATTCTGAAAAACAATGGGCTGG
CTTTAGAGAAGAAGATAATGACTTCCACCGTTGATATCAAGGATGATTCTCGGGGAAGACCAGTTCAAAAGGCTAAGATTGAGATTGTGCTGGGCAAAACTGAGAACTTC
GATGATCTGATGGCGGCTGCTGCAGAGGAAAGGGAAAACGAAGATGGTGAAGAGCAGAGTTGA
mRNA sequenceShow/hide mRNA sequence
GTGTTACATTAAATACAGAATTATTGGCTTTCAGTTTTCTTCACTTTGCCTCTTCTTTTTCAAAATCGCAGTTCCAGGGTTAGGGTTAGGGTTTTAGGTGTGAGAAGCTC
CCAATGGAAGAGATAGCGGAGGGCGTCAACTCCATCGCCTTGACCTCTGATTTGCAGAAGAAGAATCGGATTCAAGTCTCCAACACCAAGAAGCCCCTCTTCTTCTATGT
TAATCTCGCCAAGAGGTATATGCAGCAGTACAATGAGGTCGAGCTTTCTGCGCTTGGAATGGCCATTGCAACTGTTGTGACTGTTGCAGAAATTCTGAAAAACAATGGGC
TGGCTTTAGAGAAGAAGATAATGACTTCCACCGTTGATATCAAGGATGATTCTCGGGGAAGACCAGTTCAAAAGGCTAAGATTGAGATTGTGCTGGGCAAAACTGAGAAC
TTCGATGATCTGATGGCGGCTGCTGCAGAGGAAAGGGAAAACGAAGATGGTGAAGAGCAGAGTTGAAAAGTTTTTGTTTTGTTTTCTTTCTGTTTGTCTTATCCTTCTCT
GGATGTGTCTGGTTCATTCCTTATATCTGGCCTCTCTGTTCTTAGTTAACGTTAGTAATCAAGTGGTTTAATCGGTAATGTAGGCTTTTTAGTTGGGGAACCATTTGCTT
GCCCTTTTTCAGAGACCTTGGGATATCTTCGTTTAAGAGGAGTAGAAACATTTCTAAGTTACCCTTCAAAAACTATGTTCGTATTCTTTAATTTTATGCTCCAATTTTGG
TAAATGCATATTCAATGCTGTTCTGCTTCAGAAATTAAAACTGCATTGAAGTCTAGTTTTTCTTCTTATTACATGTATTACAATTCAATTTTCTTCTGCTACAGGTTCCC
CATTCACCTGTTGTGGTATGATCTAAGCATCCTTTTCTCTTTAATACTCTTCCTTAAGCACCGTTAATACCTCGGTGATGGTTCGGGATAATCCTTTGTTCGTGGCCAAG
GATCCCTCATTCAAGGTACCTTGGCCACAATCCTGTGTGCCAGCCCTGCGGGATCCATTCCATTCCCATTCAAGTGTGCTCTCAAGAGCCTAAGTCTAATGTTTGTAACA
ATTCCAACGTTCCTTCCATTTGAAAACTTGTTAACTCTCAGA
Protein sequenceShow/hide protein sequence
MEEIAEGVNSIALTSDLQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTVAEILKNNGLALEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTENF
DDLMAAAAEERENEDGEEQS