; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004279 (gene) of Chayote v1 genome

Gene IDSed0004279
OrganismSechium edule (Chayote v1)
DescriptionUpstream activation factor subunit spp27
Genome locationLG04:45834062..45838471
RNA-Seq ExpressionSed0004279
SyntenySed0004279
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR014876 - DEK, C-terminal
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607774.1 hypothetical protein SDJN03_01116, partial [Cucurbita argyrosperma subsp. sororia]8.1e-14782.35Show/hide
Query:  MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFP
        MVSDQ+LS+ALQCLLRDSA  SNPN PFSSLNAVVLELQ+KLGLDLSHK+DFIHAQIQ  LRSHPQQP  +HQ         PPS QKD+   HQ+PNFP
Subjt:  MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFP

Query:  TAP--------TFAAPP----ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKI
        +AP        TF A P      T  AP TAVGSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVKQLWAYIRKNNLQDPSNKRKI
Subjt:  TAP--------TFAAPP----ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKI

Query:  ICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED
        ICNDELR+VFETDCTDMFKMNKLLAKHIISLEPTKPS SKKARVENEPAI VK AE S+CPSVIISEALA+FFGVDGREMLQ+EVL+RIWEYIR NHLED
Subjt:  ICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED

Query:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Subjt:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

XP_004150254.1 angiomotin isoform X2 [Cucumis sativus]6.4e-14481.05Show/hide
Query:  MVSDQDLSQALQCLLRDSAS--NPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQP-------------VLLHQPPSLQKDLFALHQT
        MV+DQ+LSQA+QCLLRDSAS  NPN PFSSLNAVV ELQ KLGLDLSHKLDFIHAQIQF LRSHPQQP                 Q PS QKDLFALHQ+
Subjt:  MVSDQDLSQALQCLLRDSAS--NPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQP-------------VLLHQPPSLQKDLFALHQT

Query:  PNFPTAP--------TFAA-PPETTP--VAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNK
        PNF +AP        TF+A PP   P  V  PT  GSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVKQLWAYIRKNNLQDPSNK
Subjt:  PNFPTAP--------TFAA-PPETTP--VAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNK

Query:  RKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNH
        RKIICNDELR+VFETDCTDMFKMNKLLAKHII LEPTKPS SKKARVENE A+ VK AE SICPSVIISEALANFFGVDGREMLQ+EVL+RIWEYI+VNH
Subjt:  RKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNH

Query:  LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

XP_022941247.1 uncharacterized protein LOC111446611 [Cucurbita moschata]3.1e-14682.06Show/hide
Query:  MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFP
        MVSDQ+LS+ALQCLLRDSA  SNPN PFSSLNAVVLELQ+KLGLDLSHK+DFIHAQIQ  LRSHPQQP  +HQ         PPS QKD+   HQ+PNFP
Subjt:  MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFP

Query:  TAP--------TFAAPP----ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKI
        +AP        TF A P      T  AP TAVGSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVKQLWAYIRKNNLQDPSNKRKI
Subjt:  TAP--------TFAAPP----ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKI

Query:  ICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED
        ICNDELR+VFETDCTDMFKMNKLLAKHIISLEPTKPS SKKARVE+EPAI VK AE S+CPSVIISEALA+FFGVDGREMLQ+EVL+RIWEYIR NHLED
Subjt:  ICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED

Query:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Subjt:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

XP_022981538.1 uncharacterized protein LOC111480626 [Cucurbita maxima]1.4e-14682.35Show/hide
Query:  MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFP
        MVS+Q+LS+ALQCLLRDSA  SNPN PFSSLNAVVLELQ+KLGLDLSHK+DFIHAQIQ  LRSHPQQP  +HQ         PPS QKDL   HQ+PNFP
Subjt:  MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFP

Query:  TAP--------TFAAPP----ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKI
        +AP        TF A P      T  AP TAVGSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVKQLWAYIRKNNLQDPSNKRKI
Subjt:  TAP--------TFAAPP----ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKI

Query:  ICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED
        ICNDELR+VFETDCTDMFKMNKLLAKHIISLEPTKPS SKKARVENEPAI VK AE S+CPSVIISEALA+FFGVDGREMLQ+EVL+RIWEYIR NHLED
Subjt:  ICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED

Query:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Subjt:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

XP_023525496.1 uncharacterized protein LOC111789084 [Cucurbita pepo subsp. pepo]4.0e-14681.76Show/hide
Query:  MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFP
        MVSDQ+LS+ALQCLLRDSA  SNPN PFSSLNAVVLELQ+KLGLDLSHK+DFIHAQIQ  LRSHPQQP  +HQ         PPS QKD+   HQ+PNFP
Subjt:  MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFP

Query:  TAP--------TFAAPP----ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKI
        +AP        TF A P      T  AP TAVGSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVKQLWAYIRKNNLQDPSNKRKI
Subjt:  TAP--------TFAAPP----ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKI

Query:  ICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED
        ICNDELR+VFETDCTDMFKMNKLLAKHIISLEPTKPS SKKARVE+EPAI VK AE S+CPSV+ISEALA+FFGVDGREMLQ+EVL+RIWEYIR NHLED
Subjt:  ICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED

Query:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Subjt:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

TrEMBL top hitse value%identityAlignment
A0A0A0LEG4 Uncharacterized protein3.1e-14481.05Show/hide
Query:  MVSDQDLSQALQCLLRDSAS--NPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQP-------------VLLHQPPSLQKDLFALHQT
        MV+DQ+LSQA+QCLLRDSAS  NPN PFSSLNAVV ELQ KLGLDLSHKLDFIHAQIQF LRSHPQQP                 Q PS QKDLFALHQ+
Subjt:  MVSDQDLSQALQCLLRDSAS--NPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQP-------------VLLHQPPSLQKDLFALHQT

Query:  PNFPTAP--------TFAA-PPETTP--VAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNK
        PNF +AP        TF+A PP   P  V  PT  GSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVKQLWAYIRKNNLQDPSNK
Subjt:  PNFPTAP--------TFAA-PPETTP--VAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNK

Query:  RKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNH
        RKIICNDELR+VFETDCTDMFKMNKLLAKHII LEPTKPS SKKARVENE A+ VK AE SICPSVIISEALANFFGVDGREMLQ+EVL+RIWEYI+VNH
Subjt:  RKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNH

Query:  LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        LEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  LEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

A0A1S3BI07 uncharacterized protein LOC103490111 isoform X14.1e-14480.52Show/hide
Query:  MVSDQDLSQALQCLLRDSAS--NPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQP--------------VLLHQPPSLQKDLFALHQ
        MV+DQ+LSQA+QCLLRDSAS  NPN PFSSLNAVV ELQ KLGLDLSHKLDFIHAQIQF LRSHPQQP                  Q PS QKDLFALHQ
Subjt:  MVSDQDLSQALQCLLRDSAS--NPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQP--------------VLLHQPPSLQKDLFALHQ

Query:  TPNFPTAP--------TFAAPPETT---PVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSN
        +PNF +AP        TF A P T     V  PT  GSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVKQLWAYIRKNNLQDPSN
Subjt:  TPNFPTAP--------TFAAPPETT---PVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSN

Query:  KRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVN
        KRKIICNDELR+VFETDCTDMFKMNKLLAKHII LEPTKPS SKKARVENE A+ VK AE SICPSVIISEALANFFGVDGREMLQ+EVL+RIWEYI+VN
Subjt:  KRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVN

Query:  HLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        HLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  HLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

A0A5D3C9T5 Box A-binding factor isoform X24.1e-14480.52Show/hide
Query:  MVSDQDLSQALQCLLRDSAS--NPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQP--------------VLLHQPPSLQKDLFALHQ
        MV+DQ+LSQA+QCLLRDSAS  NPN PFSSLNAVV ELQ KLGLDLSHKLDFIHAQIQF LRSHPQQP                  Q PS QKDLFALHQ
Subjt:  MVSDQDLSQALQCLLRDSAS--NPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQP--------------VLLHQPPSLQKDLFALHQ

Query:  TPNFPTAP--------TFAAPPETT---PVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSN
        +PNF +AP        TF A P T     V  PT  GSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVKQLWAYIRKNNLQDPSN
Subjt:  TPNFPTAP--------TFAAPPETT---PVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSN

Query:  KRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVN
        KRKIICNDELR+VFETDCTDMFKMNKLLAKHII LEPTKPS SKKARVENE A+ VK AE SICPSVIISEALANFFGVDGREMLQ+EVL+RIWEYI+VN
Subjt:  KRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVN

Query:  HLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        HLEDPLNPMAVLCDAKL+ELFGCESISALGIPEVLGRHHIFRRS
Subjt:  HLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

A0A6J1FLX5 uncharacterized protein LOC1114466111.5e-14682.06Show/hide
Query:  MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFP
        MVSDQ+LS+ALQCLLRDSA  SNPN PFSSLNAVVLELQ+KLGLDLSHK+DFIHAQIQ  LRSHPQQP  +HQ         PPS QKD+   HQ+PNFP
Subjt:  MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFP

Query:  TAP--------TFAAPP----ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKI
        +AP        TF A P      T  AP TAVGSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVKQLWAYIRKNNLQDPSNKRKI
Subjt:  TAP--------TFAAPP----ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKI

Query:  ICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED
        ICNDELR+VFETDCTDMFKMNKLLAKHIISLEPTKPS SKKARVE+EPAI VK AE S+CPSVIISEALA+FFGVDGREMLQ+EVL+RIWEYIR NHLED
Subjt:  ICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED

Query:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Subjt:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

A0A6J1J2D3 uncharacterized protein LOC1114806266.7e-14782.35Show/hide
Query:  MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFP
        MVS+Q+LS+ALQCLLRDSA  SNPN PFSSLNAVVLELQ+KLGLDLSHK+DFIHAQIQ  LRSHPQQP  +HQ         PPS QKDL   HQ+PNFP
Subjt:  MVSDQDLSQALQCLLRDSA--SNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQ---------PPSLQKDLFALHQTPNFP

Query:  TAP--------TFAAPP----ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKI
        +AP        TF A P      T  AP TAVGSDPPK+STQTKTKRRGGPGGLNKLCGVSPELQ IVGQPE+PRTEIVKQLWAYIRKNNLQDPSNKRKI
Subjt:  TAP--------TFAAPP----ETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKI

Query:  ICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED
        ICNDELR+VFETDCTDMFKMNKLLAKHIISLEPTKPS SKKARVENEPAI VK AE S+CPSVIISEALA+FFGVDGREMLQ+EVL+RIWEYIR NHLED
Subjt:  ICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKARVENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLED

Query:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
        PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
Subjt:  PLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp279.4e-1345.78Show/hide
Query:  KTKRRGGPGG--LNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLL
        K KR   P    LNK   +SP+L   +G  ++ R + VK+LW YI+ ++LQDP++KR I+C+D+L+ VFE D   MF MNK L
Subjt:  KTKRRGGPGG--LNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLL

Q05024 Protein TRI11.2e-1237.89Show/hide
Query:  VSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIIS-------LEPTKPSHSKKARVENE
        +S  LQ  +G  E+PRT++VK +W YI++++LQ+P ++R+I+C++++  +F    T MF MNKLL KH+ +        E  K +  K+ ++ENE
Subjt:  VSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIIS-------LEPTKPSHSKKARVENE

Q08747 Upstream activation factor subunit UAF306.1e-1243.59Show/hide
Query:  VSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPS
        +S  L  ++G+ E+ RTE+V++LWAYI+ +NLQ+P+NK++I+C+++L ++     T+MF+M+K+LA H+   EP K S
Subjt:  VSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPS

Arabidopsis top hitse value%identityAlignment
AT1G49520.1 SWIB complex BAF60b domain-containing protein3.4e-3427.93Show/hide
Query:  MVSDQDLSQALQCLLRDSASNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQPPSLQKDLFALHQTPNFPTAPTFAAPPET
        MVSD DL   L+ +LR S     +P S    V  +L+   G++L+ K  F+  QI  FL S      LL   P  +++     Q                
Subjt:  MVSDQDLSQALQCLLRDSASNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQPPSLQKDLFALHQTPNFPTAPTFAAPPET

Query:  TPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKL
                 GS+   D T+   K +   GG NK+C +SP+L+  +G  ++ RTE+VK++WAYIR+++LQDP+N+R I+C++ L  +F     +MF+MNK 
Subjt:  TPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKL

Query:  LAKHI-----------------------------ISLEPTKPSHSKKARVENEPAIGVKVAE------------------TSICPSVIISEALANFFGVD
        LAKHI                             + +E    ++ +++R E + ++  +  +                  T +C    +S  L  F G  
Subjt:  LAKHI-----------------------------ISLEPTKPSHSKKARVENEPAIGVKVAE------------------TSICPSVIISEALANFFGVD

Query:  GREMLQAEVLKRIWEYIRVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRH
          ++ + EV+K +W+YI+ N+L+DP +   ++CD  L+ LF  ESI+   + + L +H
Subjt:  GREMLQAEVLKRIWEYIRVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRH

AT2G14880.1 SWIB/MDM2 domain superfamily protein3.0e-1441.94Show/hide
Query:  KDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFE-TDCTDMFKMNKLLAKHII
        + S  T T +R  P G+ K   VSPE+Q IV  PE+ RT+ +K++WAYI++++LQDP NKR+I+C+++L+ +FE  D     ++ KL+  H +
Subjt:  KDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFE-TDCTDMFKMNKLLAKHII

AT3G19080.1 SWIB complex BAF60b domain-containing protein2.3e-3840.98Show/hide
Query:  KTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLE-------PTKP
        K KR+GG GG  K+C +SPELQ   G  E+ RTE+VK LW YI++NNLQDP++KR IIC++  R +F  +  +MF+MNK L KHI  LE        +K 
Subjt:  KTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLE-------PTKP

Query:  SHSKKARVEN-----EPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVL
          + K ++E+     EP    K  +  +   + +S+AL  F G     + +A+V+KR+WEYI  N L+DP +   V+CD KL+ELF  +S     + ++L
Subjt:  SHSKKARVEN-----EPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVL

Query:  GRHHI
          H I
Subjt:  GRHHI

AT4G22360.1 SWIB complex BAF60b domain-containing protein3.5e-7944.99Show/hide
Query:  MVSDQDLSQALQCLLRDSASNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLR-----------------SHPQQPVLLHQP---------PS
        MVSDQDL++ ++ LLR   S+P+S  +SL+++V +L+AKLGLDL+ K  FI  QI   LR                 SHP  P   HQ          P 
Subjt:  MVSDQDLSQALQCLLRDSASNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLR-----------------SHPQQPVLLHQP---------PS

Query:  LQKDLFALHQTPNFPTAPTFAAPPETTPVAPP-------------------------------------------TAVGSDPPKDSTQTKTKRRGGPGGL
        + K  F L     F  +      P    + PP                                           +   +  PK+S    TKR+GGPGGL
Subjt:  LQKDLFALHQTPNFPTAPTFAAPPETTPVAPP-------------------------------------------TAVGSDPPKDSTQTKTKRRGGPGGL

Query:  NKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPS-HSKKAR--VENEPAIG
        NK+C VSPEL+V+VG+P +PRTEIV+QLWAYIRKNNLQDPSNKRKIIC+D LRVVFETDCTDMFKMNKLLAKHI+ L+P+K S  +KKA+  VE +    
Subjt:  NKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPS-HSKKAR--VENEPAIG

Query:  VKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS
          ++ T+I  +V +SE L  FFG    EM   E+++R+WEYI++N+LEDP+NPMA+ CD KL++L GCESISA+GI E+L R H++++S
Subjt:  VKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS

AT4G34290.1 SWIB/MDM2 domain superfamily protein5.1e-1437.01Show/hide
Query:  ALHQTPNFPTAPTFAAPPETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICN
        +L  +PN PT            V    A  SDP   +T TKT+    P G+ K   VS  +Q +VG PE+PRT+ +K++WAYI++++LQDP NKR I+C+
Subjt:  ALHQTPNFPTAPTFAAPPETTPVAPPTAVGSDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICN

Query:  DELRVVFE-TDCTDMFKMNKLLAKHII
        ++L+ +FE  +     ++ KL+  H +
Subjt:  DELRVVFE-TDCTDMFKMNKLLAKHII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCAGACCAAGACCTTTCTCAAGCTCTACAATGTCTCTTACGCGATTCTGCTTCAAACCCTAATTCCCCATTTTCTTCCCTTAACGCCGTCGTTTTGGAGTTGCA
GGCCAAGCTCGGCCTTGACTTGTCTCATAAGCTCGATTTCATCCATGCCCAGATCCAATTCTTCCTTCGTTCTCATCCTCAACAACCCGTTCTTCTTCATCAGCCTCCCT
CTTTGCAGAAAGACCTCTTTGCCCTCCATCAAACCCCTAATTTCCCAACTGCCCCTACTTTCGCCGCTCCGCCGGAAACAACCCCCGTCGCTCCTCCGACTGCTGTTGGC
TCTGACCCGCCGAAGGACAGCACCCAAACCAAAACTAAAAGAAGAGGAGGCCCAGGAGGTCTAAACAAGCTTTGTGGTGTTTCTCCCGAACTTCAGGTTATTGTCGGCCA
ACCAGAAATGCCAAGAACCGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACTTACAGGATCCGAGCAACAAAAGGAAAATAATATGCAATGATGAGTTGC
GGGTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTAGCCAAACACATTATTTCTCTTGAACCCACAAAACCATCACATTCTAAGAAGGCACGA
GTGGAGAATGAACCTGCGATCGGCGTAAAAGTTGCTGAAACTAGTATTTGTCCCTCTGTGATTATCTCTGAAGCCCTTGCAAATTTTTTTGGTGTTGATGGAAGGGAGAT
GCTCCAAGCAGAGGTTCTGAAACGCATATGGGAGTACATAAGAGTCAATCATCTTGAGGACCCTCTAAACCCGATGGCGGTGTTGTGCGATGCAAAACTCCAAGAACTGT
TTGGTTGTGAAAGCATTTCAGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCACATATTTAGGAGGTCGTGA
mRNA sequenceShow/hide mRNA sequence
TTCAATTTCACACACAGAGAAAGCTGAGAGAGAAAGAAAGAGAGTTTGGTTCTTGACAGAGATAGAAACAAATTGAATCCCAGCGACCGTTAATTTCCGTTAATTATATG
AACCAATTCTGAGCTGAAGCCACCATGGTTTCAGACCAAGACCTTTCTCAAGCTCTACAATGTCTCTTACGCGATTCTGCTTCAAACCCTAATTCCCCATTTTCTTCCCT
TAACGCCGTCGTTTTGGAGTTGCAGGCCAAGCTCGGCCTTGACTTGTCTCATAAGCTCGATTTCATCCATGCCCAGATCCAATTCTTCCTTCGTTCTCATCCTCAACAAC
CCGTTCTTCTTCATCAGCCTCCCTCTTTGCAGAAAGACCTCTTTGCCCTCCATCAAACCCCTAATTTCCCAACTGCCCCTACTTTCGCCGCTCCGCCGGAAACAACCCCC
GTCGCTCCTCCGACTGCTGTTGGCTCTGACCCGCCGAAGGACAGCACCCAAACCAAAACTAAAAGAAGAGGAGGCCCAGGAGGTCTAAACAAGCTTTGTGGTGTTTCTCC
CGAACTTCAGGTTATTGTCGGCCAACCAGAAATGCCAAGAACCGAGATAGTGAAACAGCTATGGGCATACATCAGAAAAAACAACTTACAGGATCCGAGCAACAAAAGGA
AAATAATATGCAATGATGAGTTGCGGGTGGTATTTGAAACAGACTGCACTGACATGTTCAAAATGAATAAGTTGCTAGCCAAACACATTATTTCTCTTGAACCCACAAAA
CCATCACATTCTAAGAAGGCACGAGTGGAGAATGAACCTGCGATCGGCGTAAAAGTTGCTGAAACTAGTATTTGTCCCTCTGTGATTATCTCTGAAGCCCTTGCAAATTT
TTTTGGTGTTGATGGAAGGGAGATGCTCCAAGCAGAGGTTCTGAAACGCATATGGGAGTACATAAGAGTCAATCATCTTGAGGACCCTCTAAACCCGATGGCGGTGTTGT
GCGATGCAAAACTCCAAGAACTGTTTGGTTGTGAAAGCATTTCAGCACTGGGAATCCCAGAAGTTTTAGGCCGCCACCACATATTTAGGAGGTCGTGATAACTAATCTTC
TAGGATGTTGAAGATCGATGGTGTTAGCGACGTATATCGGGGGAGTGTTTGGAAAAGTCGATAAGGTTTTTTTTCTTCCTTTTTCTTACAAAAAAATGTTGTATTTAGTG
ATGATAGTGCTTTAGTTTTGGATCTTATGTTAAGGGTGGTAAGTAAGGTGTGAACTTGGGAGAATGTAATGTAAGATGGGCTTATGGCAGAGTTTATTTTGCAATTGCCT
GCCAAGTCCTTGGTTTCCATTTGTATGACTTGGTGTTTAGGTTAGAATGACCCTGGGAGCTTCTAACATCCATACATTGCTTATGATGTGTAAAATTATGCTATCTACTT
CACTAGTTTGTCAAATATATGTTTTTCATGTAGTAAAGCTTTAACATTTACTTTGC
Protein sequenceShow/hide protein sequence
MVSDQDLSQALQCLLRDSASNPNSPFSSLNAVVLELQAKLGLDLSHKLDFIHAQIQFFLRSHPQQPVLLHQPPSLQKDLFALHQTPNFPTAPTFAAPPETTPVAPPTAVG
SDPPKDSTQTKTKRRGGPGGLNKLCGVSPELQVIVGQPEMPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRVVFETDCTDMFKMNKLLAKHIISLEPTKPSHSKKAR
VENEPAIGVKVAETSICPSVIISEALANFFGVDGREMLQAEVLKRIWEYIRVNHLEDPLNPMAVLCDAKLQELFGCESISALGIPEVLGRHHIFRRS