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Sed0004298 (gene) of Chayote v1 genome

Gene IDSed0004298
OrganismSechium edule (Chayote v1)
DescriptionWound-responsive family protein
Genome locationLG05:33074227..33074475
RNA-Seq ExpressionSed0004298
SyntenySed0004298
Gene Ontology termsNA
InterPro domainsIPR022251 - Protein of unknown function wound-induced


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572336.1 hypothetical protein SDJN03_29064, partial [Cucurbita argyrosperma subsp. sororia]4.1e-1055.56Show/hide
Query:  MAAQTGEEQFTSYSSSTMKPFPDNPSPTSSSSKLPS--SSMQPTKY------SSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPNS
        MAA+TGE+++T+YSS            TSSS+K  S  SS Q   +      S S S S AKHGGERD+ +KAEESLRTVMYLSCWGPNS
Subjt:  MAAQTGEEQFTSYSSSTMKPFPDNPSPTSSSSKLPS--SSMQPTKY------SSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPNS

KGN43575.1 hypothetical protein Csa_020190 [Cucumis sativus]1.8e-0554.43Show/hide
Query:  EEQFT---SYSSSTMKPFPDNPSPTSSSSKLPSSSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPNS
        ++Q+T   + +SS    F   P+ TSS S   SSS  PTK+S + S S     GE+DK KKAEESLRTVMYLSCWGPNS
Subjt:  EEQFT---SYSSSTMKPFPDNPSPTSSSSKLPSSSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPNS

NP_192765.1 Wound-responsive family protein [Arabidopsis thaliana]3.4e-0462.22Show/hide
Query:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN
        S  Q  ++SSS+ S+     GE +K KKAEESLRTVMYLSCWGPN
Subjt:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN

VYS62186.1 unnamed protein product [Arabidopsis thaliana]3.4e-0462.22Show/hide
Query:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN
        S  Q  ++SSS+ S+     GE +K KKAEESLRTVMYLSCWGPN
Subjt:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN

XP_006415105.1 uncharacterized protein LOC18991723 [Eutrema salsugineum]4.4e-0460Show/hide
Query:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN
        S+ Q  ++SSS+SS+    G + +K K+AEESLRTVMYLSCWGPN
Subjt:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN

TrEMBL top hitse value%identityAlignment
A0A0A0K1Q2 Uncharacterized protein8.7e-0654.43Show/hide
Query:  EEQFT---SYSSSTMKPFPDNPSPTSSSSKLPSSSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPNS
        ++Q+T   + +SS    F   P+ TSS S   SSS  PTK+S + S S     GE+DK KKAEESLRTVMYLSCWGPNS
Subjt:  EEQFT---SYSSSTMKPFPDNPSPTSSSSKLPSSSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPNS

A0A5S9XQX7 (thale cress) hypothetical protein1.6e-0462.22Show/hide
Query:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN
        S  Q  ++SSS+ S+     GE +K KKAEESLRTVMYLSCWGPN
Subjt:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN

A0A654FN14 Uncharacterized protein1.6e-0462.22Show/hide
Query:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN
        S  Q  ++SSS+ S+     GE +K KKAEESLRTVMYLSCWGPN
Subjt:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN

O82615 At4g102701.6e-0462.22Show/hide
Query:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN
        S  Q  ++SSS+ S+     GE +K KKAEESLRTVMYLSCWGPN
Subjt:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN

V4L136 Uncharacterized protein2.1e-0460Show/hide
Query:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN
        S+ Q  ++SSS+SS+    G + +K K+AEESLRTVMYLSCWGPN
Subjt:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10265.1 Wound-responsive family protein4.7e-0455.56Show/hide
Query:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN
        S  Q  K SSS+   T       +K K+AEESLRTVMYLSCWGP+
Subjt:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN

AT4G10270.1 Wound-responsive family protein3.1e-0862.22Show/hide
Query:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN
        S  Q  ++SSS+ S+     GE +K KKAEESLRTVMYLSCWGPN
Subjt:  SSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCACAAACTGGTGAAGAACAATTTACAAGCTATAGTTCTTCCACCATGAAACCTTTCCCAGATAATCCCTCTCCTACTTCTAGTTCTAGTAAACTTCCCTCTTC
TTCAATGCAGCCTACCAAGTATTCGAGCAGTGCCTCGAGCTCCACCGCCAAACACGGTGGCGAGAGGGACAAATTCAAAAAGGCTGAAGAGTCGCTTCGAACTGTCATGT
ATTTGAGCTGTTGGGGCCCTAATTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCACAAACTGGTGAAGAACAATTTACAAGCTATAGTTCTTCCACCATGAAACCTTTCCCAGATAATCCCTCTCCTACTTCTAGTTCTAGTAAACTTCCCTCTTC
TTCAATGCAGCCTACCAAGTATTCGAGCAGTGCCTCGAGCTCCACCGCCAAACACGGTGGCGAGAGGGACAAATTCAAAAAGGCTGAAGAGTCGCTTCGAACTGTCATGT
ATTTGAGCTGTTGGGGCCCTAATTCATGA
Protein sequenceShow/hide protein sequence
MAAQTGEEQFTSYSSSTMKPFPDNPSPTSSSSKLPSSSMQPTKYSSSASSSTAKHGGERDKFKKAEESLRTVMYLSCWGPNS