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Sed0004327 (gene) of Chayote v1 genome

Gene IDSed0004327
OrganismSechium edule (Chayote v1)
DescriptionThioredoxin
Genome locationLG07:40929293..40930749
RNA-Seq ExpressionSed0004327
SyntenySed0004327
Gene Ontology termsNA
InterPro domainsIPR013766 - Thioredoxin domain
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051550.1 thioredoxin H1-like [Cucumis melo var. makuwa]8.4e-4682.3Show/hide
Query:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA
        M DMGKVVSC TVGSWKQQLL AK +NKLVVVNFTATWC PCR MAP+L +LANKMS+NVI LKVDVDELMSVANE GV ALPSFQF KNGKLVDKFVGA
Subjt:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA

Query:  KKDLLHNIVSKYV
        +KD+LH  VSK+V
Subjt:  KKDLLHNIVSKYV

KAG6600023.1 Thioredoxin H4, partial [Cucurbita argyrosperma subsp. sororia]3.2e-4582.14Show/hide
Query:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA
        MADMGKVVSC TVGSWKQQ L AK HNKL+VVNFTATWCRPCRAMAP+LD+LA K  +NV+FLKVDVDELMSVANE GV ALPSFQF KNG+LVDKF GA
Subjt:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA

Query:  KKDLLHNIVSKY
        KKDLL N VSK+
Subjt:  KKDLLHNIVSKY

XP_008464900.1 PREDICTED: thioredoxin H1-like [Cucumis melo]8.4e-4682.3Show/hide
Query:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA
        M DMGKVVSC TVGSWKQQLL AK +NKLVVVNFTATWC PCR MAP+L +LANKMS+NVI LKVDVDELMSVANE GV ALPSFQF KNGKLVDKFVGA
Subjt:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA

Query:  KKDLLHNIVSKYV
        +KD+LH  VSK+V
Subjt:  KKDLLHNIVSKYV

XP_022942758.1 thioredoxin H1-like [Cucurbita moschata]1.9e-4583.04Show/hide
Query:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA
        MADMGKVVSC TVGSWKQQ L AK HNKL+VVNFTATWCRPCRAMAP+LD+LA K  +NV FLKVDVDELMSVANE GV ALPSFQF KNG+LVDKFVGA
Subjt:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA

Query:  KKDLLHNIVSKY
        KKDLL N VSK+
Subjt:  KKDLLHNIVSKY

XP_022996723.1 thioredoxin H-type-like [Cucurbita maxima]1.1e-4583.04Show/hide
Query:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA
        MADMGKVVSC TVGSWKQQ L AK HNKL+VVNFTATWCRPCRAMAP+LDELA K  +NV FLKVDVD+LMSVANE GV ALPSFQF KNG+LVDKFVGA
Subjt:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA

Query:  KKDLLHNIVSKY
        KKD+L NIVSK+
Subjt:  KKDLLHNIVSKY

TrEMBL top hitse value%identityAlignment
A0A1S3CMM6 thioredoxin H1-like4.1e-4682.3Show/hide
Query:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA
        M DMGKVVSC TVGSWKQQLL AK +NKLVVVNFTATWC PCR MAP+L +LANKMS+NVI LKVDVDELMSVANE GV ALPSFQF KNGKLVDKFVGA
Subjt:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA

Query:  KKDLLHNIVSKYV
        +KD+LH  VSK+V
Subjt:  KKDLLHNIVSKYV

A0A5A7U8S0 Thioredoxin H1-like4.1e-4682.3Show/hide
Query:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA
        M DMGKVVSC TVGSWKQQLL AK +NKLVVVNFTATWC PCR MAP+L +LANKMS+NVI LKVDVDELMSVANE GV ALPSFQF KNGKLVDKFVGA
Subjt:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA

Query:  KKDLLHNIVSKYV
        +KD+LH  VSK+V
Subjt:  KKDLLHNIVSKYV

A0A5D3DCH1 Thioredoxin H1-like4.1e-4682.3Show/hide
Query:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA
        M DMGKVVSC TVGSWKQQLL AK +NKLVVVNFTATWC PCR MAP+L +LANKMS+NVI LKVDVDELMSVANE GV ALPSFQF KNGKLVDKFVGA
Subjt:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA

Query:  KKDLLHNIVSKYV
        +KD+LH  VSK+V
Subjt:  KKDLLHNIVSKYV

A0A6J1FVM4 thioredoxin H1-like9.1e-4683.04Show/hide
Query:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA
        MADMGKVVSC TVGSWKQQ L AK HNKL+VVNFTATWCRPCRAMAP+LD+LA K  +NV FLKVDVDELMSVANE GV ALPSFQF KNG+LVDKFVGA
Subjt:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA

Query:  KKDLLHNIVSKY
        KKDLL N VSK+
Subjt:  KKDLLHNIVSKY

A0A6J1KBU8 thioredoxin H-type-like5.3e-4683.04Show/hide
Query:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA
        MADMGKVVSC TVGSWKQQ L AK HNKL+VVNFTATWCRPCRAMAP+LDELA K  +NV FLKVDVD+LMSVANE GV ALPSFQF KNG+LVDKFVGA
Subjt:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA

Query:  KKDLLHNIVSKY
        KKD+L NIVSK+
Subjt:  KKDLLHNIVSKY

SwissProt top hitse value%identityAlignment
P29448 Thioredoxin H18.3e-2850Show/hide
Query:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK
        ++ G+V++C TV +W +QL  A     LVVV+FTA+WC PCR +AP   +LA K+  NV+FLKVD DEL SVA++  + A+P+F F+K GK++DK VGAK
Subjt:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK

Query:  KDLLHNIVSKYV
        KD L + ++K++
Subjt:  KDLLHNIVSKYV

Q07090 Thioredoxin H-type 27.7e-2650.44Show/hide
Query:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA
        MA+ G+V+   TV +W + L       KL+VV+FTA+WC PC+ +A    ELA KM   V FLKVDVDEL SVA +  V A+P+F F+K GK+VDK VGA
Subjt:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA

Query:  KKDLLHNIVSKYV
        KKD L   ++K++
Subjt:  KKDLLHNIVSKYV

Q39239 Thioredoxin H46.3e-2853.15Show/hide
Query:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK
        A+ G+V+ C T   W  QL  AK  NKL+V++FTA+WC PCR +API ++LA K   + IF KVDVDEL SVA E GV A+P+F FIK G++VDK VGA 
Subjt:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK

Query:  KDLLHNIVSKY
        K+ L   + K+
Subjt:  KDLLHNIVSKY

Q39362 Thioredoxin H-type 22.8e-2850.45Show/hide
Query:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK
        A+ G+V+ C  +  W  QL  AK  NKL+V++FTA+WC PCR +AP+  +LA K   + IF KVDVDEL +VA E GV A+P+F  IK+G +VDK VGA+
Subjt:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK

Query:  KDLLHNIVSKY
        K+ LH  ++K+
Subjt:  KDLLHNIVSKY

Q43636 Thioredoxin H-type1.1e-2751.79Show/hide
Query:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK
        A+ G+V+ C TV +W +QL        L+VV+FTA+WC PCR +AP L ELA K+  NV FLKVDVDEL +VA+E  V ++P+F F+K GK++DK VGAK
Subjt:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK

Query:  KDLLHNIVSKYV
        KD L   ++K++
Subjt:  KDLLHNIVSKYV

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein4.5e-2953.15Show/hide
Query:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK
        A+ G+V+ C T   W  QL  AK  NKL+V++FTA+WC PCR +API ++LA K   + IF KVDVDEL SVA E GV A+P+F FIK G++VDK VGA 
Subjt:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK

Query:  KDLLHNIVSKY
        K+ L   + K+
Subjt:  KDLLHNIVSKY

AT1G45145.1 thioredoxin H-type 52.7e-2644.64Show/hide
Query:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA
        MA  G+V++C T+  W +++ +A    KL+V++FTA+WC PCR +AP+  E+A K + NV+F K+DVDEL +VA E  V A+P+F F+K G ++D+ VGA
Subjt:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA

Query:  KKDLLHNIVSKY
         KD ++  + K+
Subjt:  KKDLLHNIVSKY

AT3G51030.1 thioredoxin H-type 15.9e-2950Show/hide
Query:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK
        ++ G+V++C TV +W +QL  A     LVVV+FTA+WC PCR +AP   +LA K+  NV+FLKVD DEL SVA++  + A+P+F F+K GK++DK VGAK
Subjt:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK

Query:  KDLLHNIVSKYV
        KD L + ++K++
Subjt:  KDLLHNIVSKYV

AT5G39950.1 thioredoxin 22.9e-2040.91Show/hide
Query:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK
        ++  +V+   +   W+      K  NKL+VV+F+A+WC PCR + P +  +A+K  ++V F+K+DVDEL  VA E  V A+P+F  +K GK +++ +GAK
Subjt:  ADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAK

Query:  KDLLHNIVSK
        KD L   VSK
Subjt:  KDLLHNIVSK

AT5G42980.1 thioredoxin 32.2e-2348.54Show/hide
Query:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA
        MA  G+V++C TV  W ++L  A    KL+V++FTATWC PCR +AP+  +LA K   +V+F KVDVDEL +VA E  V A+P+F F+K G++ +  VGA
Subjt:  MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGA

Query:  KKD
         K+
Subjt:  KKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATATGGGAAAAGTGGTTTCTTGCCGCACTGTTGGTTCATGGAAGCAGCAACTTTTAAACGCCAAACATCACAACAAATTGGTGGTGGTGAACTTTACGGCGAC
ATGGTGCCGCCCGTGTCGAGCCATGGCTCCTATTCTCGACGAGCTTGCCAATAAGATGAGCCATAATGTTATATTCTTGAAAGTTGATGTCGACGAACTCATGAGTGTTG
CGAACGAGTCCGGAGTGGCAGCACTTCCTTCATTTCAATTCATCAAGAATGGAAAGTTGGTGGACAAGTTCGTGGGGGCAAAGAAAGACCTATTGCACAACATTGTATCT
AAATATGTCCCATGA
mRNA sequenceShow/hide mRNA sequence
CAATTTCTTTGCTTTAAAGCCCTTTAACTACCTCGTTTTTGTGCTTTGCCCCCCTTTTTTTTGTGTGTGTAAAAGATTGTAATTAATGGCAGATATGGGAAAAGTGGTTT
CTTGCCGCACTGTTGGTTCATGGAAGCAGCAACTTTTAAACGCCAAACATCACAACAAATTGGTGGTGGTGAACTTTACGGCGACATGGTGCCGCCCGTGTCGAGCCATG
GCTCCTATTCTCGACGAGCTTGCCAATAAGATGAGCCATAATGTTATATTCTTGAAAGTTGATGTCGACGAACTCATGAGTGTTGCGAACGAGTCCGGAGTGGCAGCACT
TCCTTCATTTCAATTCATCAAGAATGGAAAGTTGGTGGACAAGTTCGTGGGGGCAAAGAAAGACCTATTGCACAACATTGTATCTAAATATGTCCCATGATCGAATATAC
ATATAATATGTTGTAAATGTATCTAAGTTACGTTTAAGGAACATGAATTGTGATCAATAAAATCTGTCTTCATTACCATTTTTGTCCACCAACCCAACCCTATCTAATGA
TTGATAAATCTTTTGATATTTGTAATACTTCAATCACTTCTATGTTTTATTTCTTTCATGACTACATTATACTTCTAATGTAATAATGTATGTCTTTAAAACATAATATA
ATGTTTCTGTTTAGGATTGTCTGACGTAATAAATTTATAAAATAG
Protein sequenceShow/hide protein sequence
MADMGKVVSCRTVGSWKQQLLNAKHHNKLVVVNFTATWCRPCRAMAPILDELANKMSHNVIFLKVDVDELMSVANESGVAALPSFQFIKNGKLVDKFVGAKKDLLHNIVS
KYVP