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Sed0004332 (gene) of Chayote v1 genome

Gene IDSed0004332
OrganismSechium edule (Chayote v1)
DescriptionCaspase-6 protein
Genome locationLG07:9616841..9620495
RNA-Seq ExpressionSed0004332
SyntenySed0004332
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149349.1 uncharacterized protein LOC111017781 isoform X2 [Momordica charantia]3.6e-3185.11Show/hide
Query:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMH-IVSATCLTPHLCVSVRAFCELSHGRNGKDG
        SGS+ RSLISTVRASS     SLPRLRPPPLAARPRLQSRRLSFSTSRNL EL CTQSLLPMH I+ ATCLT HLCVS RAFCELSHGRNGKDG
Subjt:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMH-IVSATCLTPHLCVSVRAFCELSHGRNGKDG

XP_022941570.1 uncharacterized protein LOC111446884 isoform X3 [Cucurbita moschata]3.6e-3184.95Show/hide
Query:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHGRNGKDG
        SGS+ RSLISTVRASS     SLPRL PPPLAARPRLQSRRLSFSTSRNL EL CTQSLL MHIV ATCLT HLCVSVRAFCELSHG NGKDG
Subjt:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHGRNGKDG

XP_022983431.1 uncharacterized protein LOC111482036 isoform X1 [Cucurbita maxima]2.2e-2886.21Show/hide
Query:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHG
        SGS+ RSLISTVRASS     SLPRLRPPPLAARPRLQSRRLSFSTSRNL EL CTQSLL MHIV ATCLT HLCVSVRAFCELSHG
Subjt:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHG

XP_022983440.1 uncharacterized protein LOC111482036 isoform X2 [Cucurbita maxima]9.3e-3286.02Show/hide
Query:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHGRNGKDG
        SGS+ RSLISTVRASS     SLPRLRPPPLAARPRLQSRRLSFSTSRNL EL CTQSLL MHIV ATCLT HLCVSVRAFCELSHG NGKDG
Subjt:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHGRNGKDG

XP_038883079.1 uncharacterized protein LOC120074027 isoform X2 [Benincasa hispida]5.1e-3082.11Show/hide
Query:  ASGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMH-IVSATCLTPHLCVSVRAFCELSHGRNGKDG
        +SGS+ RSLIS+VRASS     SLPRLRPPPLAARPR QSRRLSFSTSRNL EL CTQSLLPMH I+ ATCLT HLCVS RAFCELSHGRNGKDG
Subjt:  ASGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMH-IVSATCLTPHLCVSVRAFCELSHGRNGKDG

TrEMBL top hitse value%identityAlignment
A0A6J1D6T0 uncharacterized protein LOC111017781 isoform X21.7e-3185.11Show/hide
Query:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMH-IVSATCLTPHLCVSVRAFCELSHGRNGKDG
        SGS+ RSLISTVRASS     SLPRLRPPPLAARPRLQSRRLSFSTSRNL EL CTQSLLPMH I+ ATCLT HLCVS RAFCELSHGRNGKDG
Subjt:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMH-IVSATCLTPHLCVSVRAFCELSHGRNGKDG

A0A6J1FU19 uncharacterized protein LOC111446884 isoform X31.7e-3184.95Show/hide
Query:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHGRNGKDG
        SGS+ RSLISTVRASS     SLPRL PPPLAARPRLQSRRLSFSTSRNL EL CTQSLL MHIV ATCLT HLCVSVRAFCELSHG NGKDG
Subjt:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHGRNGKDG

A0A6J1IZB9 uncharacterized protein LOC111482036 isoform X31.0e-2886.21Show/hide
Query:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHG
        SGS+ RSLISTVRASS     SLPRLRPPPLAARPRLQSRRLSFSTSRNL EL CTQSLL MHIV ATCLT HLCVSVRAFCELSHG
Subjt:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHG

A0A6J1J270 uncharacterized protein LOC111482036 isoform X11.0e-2886.21Show/hide
Query:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHG
        SGS+ RSLISTVRASS     SLPRLRPPPLAARPRLQSRRLSFSTSRNL EL CTQSLL MHIV ATCLT HLCVSVRAFCELSHG
Subjt:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHG

A0A6J1J5V3 uncharacterized protein LOC111482036 isoform X24.5e-3286.02Show/hide
Query:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHGRNGKDG
        SGS+ RSLISTVRASS     SLPRLRPPPLAARPRLQSRRLSFSTSRNL EL CTQSLL MHIV ATCLT HLCVSVRAFCELSHG NGKDG
Subjt:  SGSVFRSLISTVRASS-----SLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHGRNGKDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15000.1 unknown protein2.6e-1151.65Show/hide
Query:  SGSVFRSLISTVRASSS-------LPRLRPPPLAARPRLQSRRLSFST-SRNLVELRCTQSLLPMHIVSATC-LTPHLCVSVRAFCELSHG
        +GS  RS +S    S S       LPRLRPP    +  L SRR +FS+ SRNL  L CTQS LP++ V AT  LT HL V++RAFCELS+G
Subjt:  SGSVFRSLISTVRASSS-------LPRLRPPPLAARPRLQSRRLSFST-SRNLVELRCTQSLLPMHIVSATC-LTPHLCVSVRAFCELSHG

AT2G15000.2 unknown protein2.3e-1252.58Show/hide
Query:  SGSVFRSLISTVRASSS-------LPRLRPPPLAARPRLQSRRLSFST-SRNLVELRCTQSLLPMHIVSATC-LTPHLCVSVRAFCELSHGRNGKDG
        +GS  RS +S    S S       LPRLRPP    +  L SRR +FS+ SRNL  L CTQS LP++ V AT  LT HL V++RAFCELS+G  GKDG
Subjt:  SGSVFRSLISTVRASSS-------LPRLRPPPLAARPRLQSRRLSFST-SRNLVELRCTQSLLPMHIVSATC-LTPHLCVSVRAFCELSHGRNGKDG

AT2G15000.3 unknown protein2.3e-1252.58Show/hide
Query:  SGSVFRSLISTVRASSS-------LPRLRPPPLAARPRLQSRRLSFST-SRNLVELRCTQSLLPMHIVSATC-LTPHLCVSVRAFCELSHGRNGKDG
        +GS  RS +S    S S       LPRLRPP    +  L SRR +FS+ SRNL  L CTQS LP++ V AT  LT HL V++RAFCELS+G  GKDG
Subjt:  SGSVFRSLISTVRASSS-------LPRLRPPPLAARPRLQSRRLSFST-SRNLVELRCTQSLLPMHIVSATC-LTPHLCVSVRAFCELSHGRNGKDG

AT2G15000.4 unknown protein2.6e-1151.65Show/hide
Query:  SGSVFRSLISTVRASSS-------LPRLRPPPLAARPRLQSRRLSFST-SRNLVELRCTQSLLPMHIVSATC-LTPHLCVSVRAFCELSHG
        +GS  RS +S    S S       LPRLRPP    +  L SRR +FS+ SRNL  L CTQS LP++ V AT  LT HL V++RAFCELS+G
Subjt:  SGSVFRSLISTVRASSS-------LPRLRPPPLAARPRLQSRRLSFST-SRNLVELRCTQSLLPMHIVSATC-LTPHLCVSVRAFCELSHG

AT2G15000.5 unknown protein2.6e-1151.65Show/hide
Query:  SGSVFRSLISTVRASSS-------LPRLRPPPLAARPRLQSRRLSFST-SRNLVELRCTQSLLPMHIVSATC-LTPHLCVSVRAFCELSHG
        +GS  RS +S    S S       LPRLRPP    +  L SRR +FS+ SRNL  L CTQS LP++ V AT  LT HL V++RAFCELS+G
Subjt:  SGSVFRSLISTVRASSS-------LPRLRPPPLAARPRLQSRRLSFST-SRNLVELRCTQSLLPMHIVSATC-LTPHLCVSVRAFCELSHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTGGATCTGTATTTCGCTCCCTCATTTCCACTGTTAGGGCTTCTTCTTCTCTTCCTCGGCTCCGGCCGCCGCCTCTCGCCGCCCGACCTCGCCTCCAATCTCG
TCGCCTTTCATTTTCCACTTCCAGGAATTTAGTAGAACTGAGATGTACGCAGTCTCTTCTGCCCATGCACATTGTGAGTGCTACCTGCCTGACTCCACACCTATGTGTTA
GCGTGCGGGCTTTCTGCGAGCTATCTCATGGAAGGAATGGAAAAGATGGGTGA
mRNA sequenceShow/hide mRNA sequence
GTCCATAGGCATTCAACCATTACTCGTAAAACCCTCACACAGAGCGGTACACAATTGGAACAAAAAAAGCTTGCAGTGCTAAAATGGCTTCTGGATCTGTATTTCGCTCC
CTCATTTCCACTGTTAGGGCTTCTTCTTCTCTTCCTCGGCTCCGGCCGCCGCCTCTCGCCGCCCGACCTCGCCTCCAATCTCGTCGCCTTTCATTTTCCACTTCCAGGAA
TTTAGTAGAACTGAGATGTACGCAGTCTCTTCTGCCCATGCACATTGTGAGTGCTACCTGCCTGACTCCACACCTATGTGTTAGCGTGCGGGCTTTCTGCGAGCTATCTC
ATGGAAGGAATGGAAAAGATGGGTGATGCACGAGGACTCTATCATACAAAAGCAGGAGACCGTCACAATTTTTGTACTTGAGTGATCTCCGGTAGAAGCACACGTGAGCA
ATTCTATGGGGATGAAGTTGAGGAGAGAGAGAGAGATAGTTTCTGGTAACCTTATTAGGTTGGTAGATGTAATAAAAAAAAATTCCTAGCTGTTCAGGGAATTCTTCCTA
TTTTTCCTCACAGTACTGACTTTGCCTATGGATTCCCTAAAATTGATGATTATCTGACCTCCTTTATTTCTTTTGGGGCTGAATTTTGTAATCATTTACCTCCAATTACT
TTCATACCAGTTACTGGATTTAGAGTCAACATTATGATATTCTTGTTTCTATTAGCTTTCTCTGTAGTCTGTCTGTACCTTTAACCTAGGAATTATCAATTATCCATCTG
TACACAGCTCAACATAGAGAAATAATAATCCATCCTTGAGTTTCCA
Protein sequenceShow/hide protein sequence
MASGSVFRSLISTVRASSSLPRLRPPPLAARPRLQSRRLSFSTSRNLVELRCTQSLLPMHIVSATCLTPHLCVSVRAFCELSHGRNGKDG