CuGenDBv2

Gene ID	Sed0004333
Organism	Sechium edule (Chayote v1)
Description	helicase protein MOM1 isoform X2
Genome location	LG11:28461323..28462797
RNA-Seq Expression	Sed0004333
Synteny	Sed0004333
Gene Ontology terms	GO:0006342 - chromatin silencing (biological process)
InterPro domains	IPR039322 - MOM1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6607145.1 Helicase protein MOM1, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-75

58.18

Show/hide

Query:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------
        +KL LKSECEKEIEE    I+KKYETKLQESETEFDLR  DLDVNY+KVLMNKILA AFR K ND++ CD GPSLAP +LQP  LQN+P P         
Subjt:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------

Query:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT
        P +V S TFNAPSI   + AT ANLS NLP+SS ST +TSM +H   THFS +PMRPP I SI+SP GNP +GSVIRA           PAPHLQPFRPT
Subjt:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT

Query:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP
        S+ SAANPRGI+TQHG SNPST PP        PS                                    +D NNRAGVN P N  P  A+VTL  PQP
Subjt:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP

Query:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD
        VPPVSTG STQV  +N TGDSDVV LSD D
Subjt:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD

KAG7036831.1 Helicase protein MOM1 [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-75

58.18

Show/hide

Query:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------
        +KL LKSECEKEIEE    I+KKYETKLQESETEFDLR  DLDVNY+KVLMNKILA AFR K ND++ CD GPSLAP +LQP  LQN+P P         
Subjt:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------

Query:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT
        P +V S TFNAPSI   + AT ANLS NLP+SS ST +TSM +H   THFS +PMRPP I SI+SP GNP +GSVIRA           PAPHLQPFRPT
Subjt:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT

Query:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP
        S+ SAANPRGI+TQHG SNPST PP        PS                                    +D NNRAGVN P N  P  A+VTL  PQP
Subjt:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP

Query:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD
        VPPVSTG STQV  +N TGDSDVV LSD D
Subjt:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD

XP_022949439.1 helicase protein MOM1 isoform X1 [Cucurbita moschata]

1.4e-75

58.18

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Query:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------
        +KL LKSECEKEIEE    I+KKYETKLQESETEFDLR  DLDVNY+KVLMNKILA AFR K ND++ CD GPSLAP +LQP  LQN+P P         
Subjt:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------

Query:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT
        P +V S TFNAPSI   + AT ANLS NLP+SS ST +TSM +H   THFS +PMRPP I SI+SP GNP +GSVIRA           PAPHLQPFRPT
Subjt:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT

Query:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP
        S+ SAANPRGI+TQHG SNPST PP        PS                                    +D NNRAGVN P N  P  A+VTL  PQP
Subjt:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP

Query:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD
        VPPVSTG STQV  +N TGDSDVV LSD D
Subjt:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD

XP_022949441.1 helicase protein MOM1 isoform X2 [Cucurbita moschata]

1.4e-75

58.18

Show/hide

Query:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------
        +KL LKSECEKEIEE    I+KKYETKLQESETEFDLR  DLDVNY+KVLMNKILA AFR K ND++ CD GPSLAP +LQP  LQN+P P         
Subjt:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------

Query:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT
        P +V S TFNAPSI   + AT ANLS NLP+SS ST +TSM +H   THFS +PMRPP I SI+SP GNP +GSVIRA           PAPHLQPFRPT
Subjt:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT

Query:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP
        S+ SAANPRGI+TQHG SNPST PP        PS                                    +D NNRAGVN P N  P  A+VTL  PQP
Subjt:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP

Query:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD
        VPPVSTG STQV  +N TGDSDVV LSD D
Subjt:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD

XP_022949442.1 helicase protein MOM1 isoform X3 [Cucurbita moschata]

1.4e-75

58.18

Show/hide

Query:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------
        +KL LKSECEKEIEE    I+KKYETKLQESETEFDLR  DLDVNY+KVLMNKILA AFR K ND++ CD GPSLAP +LQP  LQN+P P         
Subjt:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------

Query:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT
        P +V S TFNAPSI   + AT ANLS NLP+SS ST +TSM +H   THFS +PMRPP I SI+SP GNP +GSVIRA           PAPHLQPFRPT
Subjt:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT

Query:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP
        S+ SAANPRGI+TQHG SNPST PP        PS                                    +D NNRAGVN P N  P  A+VTL  PQP
Subjt:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP

Query:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD
        VPPVSTG STQV  +N TGDSDVV LSD D
Subjt:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD

TrEMBL top hits

e value

%identity

Alignment

A0A6J1GC12 helicase protein MOM1 isoform X3

6.6e-76

58.18

Show/hide

Query:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------
        +KL LKSECEKEIEE    I+KKYETKLQESETEFDLR  DLDVNY+KVLMNKILA AFR K ND++ CD GPSLAP +LQP  LQN+P P         
Subjt:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------

Query:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT
        P +V S TFNAPSI   + AT ANLS NLP+SS ST +TSM +H   THFS +PMRPP I SI+SP GNP +GSVIRA           PAPHLQPFRPT
Subjt:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT

Query:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP
        S+ SAANPRGI+TQHG SNPST PP        PS                                    +D NNRAGVN P N  P  A+VTL  PQP
Subjt:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP

Query:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD
        VPPVSTG STQV  +N TGDSDVV LSD D
Subjt:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD

A0A6J1GC13 helicase protein MOM1 isoform X2

6.6e-76

58.18

Show/hide

Query:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------
        +KL LKSECEKEIEE    I+KKYETKLQESETEFDLR  DLDVNY+KVLMNKILA AFR K ND++ CD GPSLAP +LQP  LQN+P P         
Subjt:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------

Query:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT
        P +V S TFNAPSI   + AT ANLS NLP+SS ST +TSM +H   THFS +PMRPP I SI+SP GNP +GSVIRA           PAPHLQPFRPT
Subjt:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT

Query:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP
        S+ SAANPRGI+TQHG SNPST PP        PS                                    +D NNRAGVN P N  P  A+VTL  PQP
Subjt:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP

Query:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD
        VPPVSTG STQV  +N TGDSDVV LSD D
Subjt:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD

A0A6J1GCT4 helicase protein MOM1 isoform X1

6.6e-76

58.18

Show/hide

Query:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------
        +KL LKSECEKEIEE    I+KKYETKLQESETEFDLR  DLDVNY+KVLMNKILA AFR K ND++ CD GPSLAP +LQP  LQN+P P         
Subjt:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------

Query:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT
        P +V S TFNAPSI   + AT ANLS NLP+SS ST +TSM +H   THFS +PMRPP I SI+SP GNP +GSVIRA           PAPHLQPFRPT
Subjt:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRA-----------PAPHLQPFRPT

Query:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP
        S+ SAANPRGI+TQHG SNPST PP        PS                                    +D NNRAGVN P N  P  A+VTL  PQP
Subjt:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP

Query:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD
        VPPVSTG STQV  +N TGDSDVV LSD D
Subjt:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD

A0A6J1K931 helicase protein MOM1 isoform X3

6.8e-73

56.97

Show/hide

Query:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------
        +KL LKSECEKEIEE    I+KKYETKLQESETEFDLR  DLDVNY+KVLMNKILA AFR K ND++ CD GPSLAP +LQ   LQN+P P         
Subjt:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------

Query:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRAP-----------APHLQPFRPT
        P +V S TFNAPSI   + AT  N S NLP+SS ST +TSM +H   THFS +PMRPP I SI+SP GNP +GSVIRAP           APHLQPFRPT
Subjt:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRAP-----------APHLQPFRPT

Query:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP
        S+ SAANPRGI+TQHG SNPST PP        PS                                    +D NNRAGVN P N  P  A+VTL  PQP
Subjt:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP

Query:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD
        VP VSTG STQV  +N TGDSDVV LSD D
Subjt:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD

A0A6J1KDL3 helicase protein MOM1 isoform X1

6.8e-73

56.97

Show/hide

Query:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------
        +KL LKSECEKEIEE    I+KKYETKLQESETEFDLR  DLDVNY+KVLMNKILA AFR K ND++ CD GPSLAP +LQ   LQN+P P         
Subjt:  QKLQLKSECEKEIEE----IKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRP---------

Query:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRAP-----------APHLQPFRPT
        P +V S TFNAPSI   + AT  N S NLP+SS ST +TSM +H   THFS +PMRPP I SI+SP GNP +GSVIRAP           APHLQPFRPT
Subjt:  PLVVCSQTFNAPSI---KTATVANLSINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNP-LGSVIRAP-----------APHLQPFRPT

Query:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP
        S+ SAANPRGI+TQHG SNPST PP        PS                                    +D NNRAGVN P N  P  A+VTL  PQP
Subjt:  STNSAANPRGIATQHGLSNPSTTPP--------PSA-----------------------------------IDTNNRAGVNSPHNV-PSLAEVTLNTPQP

Query:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD
        VP VSTG STQV  +N TGDSDVV LSD D
Subjt:  VPPVSTGSSTQVTVINPTGDSDVVCLSDSD

SwissProt top hits

e value

%identity

Alignment

Q9M658 Helicase protein MOM1

8.2e-07

27.14

Show/hide

Query:  QKLQLKSECEKEIEEIKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIG------PSLAPQILQPPQLQNIPRPPLVVCSQ
        +K  LK+E E+++ E++ ++  K  E E E + R + ++ + N V+MNK+LA AF  KC D K    G        LA +  Q   L+N   P  +  S 
Subjt:  QKLQLKSECEKEIEEIKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIG------PSLAPQILQPPQLQNIPRPPLVVCSQ

Query:  TFNAPSIKTATVANLSINLPA--------SSQSTTTTSMRLHDPPTHFSGNPM---RPPRISSI-----TSPIGNPLGSVIRAPAPHLQPFRPTSTNSAA
        +F AP++ +A +     + PA         + S  ++  R      +F+  PM   R P IS+I      +P  NP    +R+PAPHL  +RP+S+   A
Subjt:  TFNAPSIKTATVANLSINLPA--------SSQSTTTTSMRLHDPPTHFSGNPM---RPPRISSI-----TSPIGNPLGSVIRAPAPHLQPFRPTSTNSAA

Query:  NPRGIATQHGLSNPSTTPPPSAIDTNNRAGVNSPHNVPSLAEVTLNTPQPVPPVSTGSSTQVTVINPTGDSDVVCLSDSD
                   + P+++ PP A+               + + V++   Q   P  + SS          +++VVCLSD +
Subjt:  NPRGIATQHGLSNPSTTPPPSAIDTNNRAGVNSPHNVPSLAEVTLNTPQPVPPVSTGSSTQVTVINPTGDSDVVCLSDSD

Arabidopsis top hits

e value

%identity

Alignment

AT1G08060.1 ATP-dependent helicase family protein

5.8e-08

27.14

Show/hide

Query:  QKLQLKSECEKEIEEIKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIG------PSLAPQILQPPQLQNIPRPPLVVCSQ
        +K  LK+E E+++ E++ ++  K  E E E + R + ++ + N V+MNK+LA AF  KC D K    G        LA +  Q   L+N   P  +  S 
Subjt:  QKLQLKSECEKEIEEIKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIG------PSLAPQILQPPQLQNIPRPPLVVCSQ

Query:  TFNAPSIKTATVANLSINLPA--------SSQSTTTTSMRLHDPPTHFSGNPM---RPPRISSI-----TSPIGNPLGSVIRAPAPHLQPFRPTSTNSAA
        +F AP++ +A +     + PA         + S  ++  R      +F+  PM   R P IS+I      +P  NP    +R+PAPHL  +RP+S+   A
Subjt:  TFNAPSIKTATVANLSINLPA--------SSQSTTTTSMRLHDPPTHFSGNPM---RPPRISSI-----TSPIGNPLGSVIRAPAPHLQPFRPTSTNSAA

Query:  NPRGIATQHGLSNPSTTPPPSAIDTNNRAGVNSPHNVPSLAEVTLNTPQPVPPVSTGSSTQVTVINPTGDSDVVCLSDSD
                   + P+++ PP A+               + + V++   Q   P  + SS          +++VVCLSD +
Subjt:  NPRGIATQHGLSNPSTTPPPSAIDTNNRAGVNSPHNVPSLAEVTLNTPQPVPPVSTGSSTQVTVINPTGDSDVVCLSDSD

AT1G08060.2 ATP-dependent helicase family protein

5.8e-08

27.14

Show/hide

Query:  QKLQLKSECEKEIEEIKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIG------PSLAPQILQPPQLQNIPRPPLVVCSQ
        +K  LK+E E+++ E++ ++  K  E E E + R + ++ + N V+MNK+LA AF  KC D K    G        LA +  Q   L+N   P  +  S 
Subjt:  QKLQLKSECEKEIEEIKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIG------PSLAPQILQPPQLQNIPRPPLVVCSQ

Query:  TFNAPSIKTATVANLSINLPA--------SSQSTTTTSMRLHDPPTHFSGNPM---RPPRISSI-----TSPIGNPLGSVIRAPAPHLQPFRPTSTNSAA
        +F AP++ +A +     + PA         + S  ++  R      +F+  PM   R P IS+I      +P  NP    +R+PAPHL  +RP+S+   A
Subjt:  TFNAPSIKTATVANLSINLPA--------SSQSTTTTSMRLHDPPTHFSGNPM---RPPRISSI-----TSPIGNPLGSVIRAPAPHLQPFRPTSTNSAA

Query:  NPRGIATQHGLSNPSTTPPPSAIDTNNRAGVNSPHNVPSLAEVTLNTPQPVPPVSTGSSTQVTVINPTGDSDVVCLSDSD
                   + P+++ PP A+               + + V++   Q   P  + SS          +++VVCLSD +
Subjt:  NPRGIATQHGLSNPSTTPPPSAIDTNNRAGVNSPHNVPSLAEVTLNTPQPVPPVSTGSSTQVTVINPTGDSDVVCLSDSD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAGAAACTGCAGCTGAAATCTGAATGTGAGAAAGAAATCGAGGAAATCAAGAAGAAGTACGAAACTAAGCTGCAGGAGTCTGAGACTGAATTTGATCTTAGGTTGAG
TGACCTTGATGTGAATTACAATAAGGTTTTGATGAATAAGATCTTGGCTGGGGCTTTCAGGTTGAAATGCAATGATACTAAGGAATGTGATATTGGTCCCAGTCTTGCAC
CACAGATTCTTCAGCCACCTCAGCTGCAAAATATACCGAGGCCTCCTTTGGTAGTCTGTTCACAAACATTCAATGCACCTTCGATTAAGACTGCAACTGTGGCAAATCTG
TCGATCAACTTACCTGCCTCTAGCCAAAGTACAACTACAACATCGATGCGCCTTCACGACCCGCCCACGCATTTCTCAGGCAATCCAATGAGGCCCCCACGTATCAGCTC
CATCACTTCTCCTATTGGAAACCCACTCGGTAGTGTTATTCGTGCCCCAGCTCCTCATTTGCAACCTTTCCGACCTACATCAACAAATTCAGCAGCCAATCCTCGTGGTA
TCGCTACTCAACATGGACTGAGCAACCCTTCTACAACCCCTCCCCCATCTGCAATAGATACGAACAATCGTGCTGGTGTGAATTCTCCACACAATGTTCCTTCTCTTGCA
GAGGTAACCTTAAATACACCCCAACCTGTTCCGCCAGTTAGTACAGGTAGCAGCACGCAGGTTACTGTAATCAATCCCACGGGAGATTCAGATGTTGTCTGCTTGTCCGA
CAGCGATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MQKLQLKSECEKEIEEIKKKYETKLQESETEFDLRLSDLDVNYNKVLMNKILAGAFRLKCNDTKECDIGPSLAPQILQPPQLQNIPRPPLVVCSQTFNAPSIKTATVANL
SINLPASSQSTTTTSMRLHDPPTHFSGNPMRPPRISSITSPIGNPLGSVIRAPAPHLQPFRPTSTNSAANPRGIATQHGLSNPSTTPPPSAIDTNNRAGVNSPHNVPSLA
EVTLNTPQPVPPVSTGSSTQVTVINPTGDSDVVCLSDSD

Sed0004333 (gene) of Chayote v1 genome