CuGenDBv2

Gene ID	Sed0004351
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG07:14132248..14133155
RNA-Seq Expression	Sed0004351
Synteny	Sed0004351
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044789.1 putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa]

2.2e-56

58.4

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Query:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFSHITPATHEP
        MD  FF KAEK S PIPRCNLL++ SK FR L L FLL SLSWI SRLPIA  ISA Y  KL AF ATPLFGFLLCNAIIVAL+    QFS   PAT + 
Subjt:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFSHITPATHEP

Query:  SDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVRR
        +DRIYE+LI  TGT          E+ E+VYQDK+II+E  + S +  D        D + +SG    KV+ R+LSEKL     +   EKLRRSETE  R
Subjt:  SDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVRR

Query:  NLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG
        NLE S +  Y+++DLS EEFQR+IE FIAKEK+FRREESSAIV +L CDG
Subjt:  NLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG

KAG6600586.1 hypothetical protein SDJN03_05819, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-50

57.45

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Query:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL-------QFSHITPAT
        MDL FFHK EK  +P    NLL+M  K FRFL LCFLL  LSWILSRLPIA  ISA +  KL  F A+PLFGFLLCNAII ALL         S +T   
Subjt:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL-------QFSHITPAT

Query:  HEPSDRIYENLILTTGT----AELPEVVYQDKQIISESAISSIHRAD---PDPDPESGFGDRKVMWRTLSEKLKPREPREKLRRSETEVRRNLERSPETW
         +  DRIY +LI  +G+        E VYQDKQII+E   S  H+ +    D + ESG    KV+ RTLSEKLKP+   EKLRRSETE  RNLE S +  
Subjt:  HEPSDRIYENLILTTGT----AELPEVVYQDKQIISESAISSIHRAD---PDPDPESGFGDRKVMWRTLSEKLKPREPREKLRRSETEVRRNLERSPETW

Query:  YFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVL
        Y+++DLS EEFQR+IE FIAKEK+FRREESSAIVL
Subjt:  YFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVL

XP_008452094.1 PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo]

6.8e-58

59.2

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Query:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFSHITPATHEP
        MD  FF KAEK S PIPRCNLL++ SK FRFL L FLL SLSWI SRLPIA  ISA Y  KL AF ATPLFGFLLCNAIIVAL+    QFS   PAT + 
Subjt:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFSHITPATHEP

Query:  SDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVRR
        +DRIYE+LI  TGT          E+ E+VYQDK+II+E  + S +  D        D + +SG G  KV+ R+LSEKL     +   EKLRRSETE  R
Subjt:  SDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVRR

Query:  NLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG
        NLE S +  Y+++DLS EEFQR+IE FIAKEK+FRREESSAIV +L CDG
Subjt:  NLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG

XP_011653156.1 uncharacterized protein LOC105435182 [Cucumis sativus]

1.0e-53

58.17

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Query:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFS-HITPATHE
        MD  FF KAEK S PIPRCNLL++ SK FRFL L FLL SLSWI SRLPIA  ISA Y+ KL AF ATPLFGFLLCNAIIVAL+    QFS   T  TH 
Subjt:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFS-HITPATHE

Query:  PSDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVR
           RIYE+LI  TGT          E+ E+VYQDKQII+E  + S +  D        D + ESG G  KV+ R+LSEKL     +   EKLRRSETE  
Subjt:  PSDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVR

Query:  RNLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG
         NLE + +   +++DLS EEFQR+IE FIAKEK+FRREESSAIV +L CDG
Subjt:  RNLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG

XP_038888396.1 uncharacterized protein LOC120078241 [Benincasa hispida]

2.0e-57

60.64

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Query:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFSHITPATHEP
        MD  FF KAEK SNPIPRCNLL++ +K FRFL L FLL  LSWILSRLPIA  +SA Y  KL AF ATPLFGFLLCNAIIVAL+    QF     +T   
Subjt:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFSHITPATHEP

Query:  S----DRIYENLILTTGTAELP-------EVVYQDKQIISESAISSIHR----ADPDPDPESGFGDRKVMWRTLSEKLKPR---EPREKLRRSETEVRRN
        S    DRIYE+LI  TG+ +L        E+VYQDKQII+E  I+SI R     + D + ESG G  KVM RTLSEKL        REKLRRSETE  RN
Subjt:  S----DRIYENLILTTGTAELP-------EVVYQDKQIISESAISSIHR----ADPDPDPESGFGDRKVMWRTLSEKLKPR---EPREKLRRSETEVRRN

Query:  LERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG
        LE S +  Y ++DLS EEFQR+IE FIAKEK+FRREESSAIV +L CDG
Subjt:  LERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KY10 Uncharacterized protein

4.9e-54

58.17

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Query:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFS-HITPATHE
        MD  FF KAEK S PIPRCNLL++ SK FRFL L FLL SLSWI SRLPIA  ISA Y+ KL AF ATPLFGFLLCNAIIVAL+    QFS   T  TH 
Subjt:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFS-HITPATHE

Query:  PSDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVR
           RIYE+LI  TGT          E+ E+VYQDKQII+E  + S +  D        D + ESG G  KV+ R+LSEKL     +   EKLRRSETE  
Subjt:  PSDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVR

Query:  RNLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG
         NLE + +   +++DLS EEFQR+IE FIAKEK+FRREESSAIV +L CDG
Subjt:  RNLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG

A0A1S3BT40 uncharacterized protein LOC103493205

3.3e-58

59.2

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Query:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFSHITPATHEP
        MD  FF KAEK S PIPRCNLL++ SK FRFL L FLL SLSWI SRLPIA  ISA Y  KL AF ATPLFGFLLCNAIIVAL+    QFS   PAT + 
Subjt:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFSHITPATHEP

Query:  SDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVRR
        +DRIYE+LI  TGT          E+ E+VYQDK+II+E  + S +  D        D + +SG G  KV+ R+LSEKL     +   EKLRRSETE  R
Subjt:  SDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVRR

Query:  NLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG
        NLE S +  Y+++DLS EEFQR+IE FIAKEK+FRREESSAIV +L CDG
Subjt:  NLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG

A0A5A7TU70 Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6

1.1e-56

58.4

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Query:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFSHITPATHEP
        MD  FF KAEK S PIPRCNLL++ SK FR L L FLL SLSWI SRLPIA  ISA Y  KL AF ATPLFGFLLCNAIIVAL+    QFS   PAT + 
Subjt:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFSHITPATHEP

Query:  SDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVRR
        +DRIYE+LI  TGT          E+ E+VYQDK+II+E  + S +  D        D + +SG    KV+ R+LSEKL     +   EKLRRSETE  R
Subjt:  SDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVRR

Query:  NLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG
        NLE S +  Y+++DLS EEFQR+IE FIAKEK+FRREESSAIV +L CDG
Subjt:  NLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG

A0A5D3CYU3 Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6

3.3e-58

59.2

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Query:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFSHITPATHEP
        MD  FF KAEK S PIPRCNLL++ SK FRFL L FLL SLSWI SRLPIA  ISA Y  KL AF ATPLFGFLLCNAIIVAL+    QFS   PAT + 
Subjt:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL----QFSHITPATHEP

Query:  SDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVRR
        +DRIYE+LI  TGT          E+ E+VYQDK+II+E  + S +  D        D + +SG G  KV+ R+LSEKL     +   EKLRRSETE  R
Subjt:  SDRIYENLILTTGTA---------ELPEVVYQDKQIISESAISSIHRAD-------PDPDPESGFGDRKVMWRTLSEKLK---PREPREKLRRSETEVRR

Query:  NLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG
        NLE S +  Y+++DLS EEFQR+IE FIAKEK+FRREESSAIV +L CDG
Subjt:  NLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVLLLPCDG

A0A6J1JK52 uncharacterized protein LOC111486513

8.6e-51

56.6

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Query:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL-------QFSHITPAT
        MDL FFHK EK  +P    NLL++  K FRFL LCFLL  LSW LSRLPIA  ISA +  KL  F A+PLFGFLLCNAII ALL         S +T   
Subjt:  MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALL-------QFSHITPAT

Query:  HEPSDRIYENLILTTGTAEL----PEVVYQDKQIISESAISSIHRAD---PDPDPESGFGDRKVMWRTLSEKLKPREPREKLRRSETEVRRNLERSPETW
         +  DRIY +LI  +G+ ++     E+VYQDKQII+E   S  H+ +    D + ESG    KV+ RTLSEKLKP+   EKLRRSETE  RNLE S +  
Subjt:  HEPSDRIYENLILTTGTAEL----PEVVYQDKQIISESAISSIHRAD---PDPDPESGFGDRKVMWRTLSEKLKPREPREKLRRSETEVRRNLERSPETW

Query:  YFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVL
        Y+++DLS EEFQR+IE FIAKEK+FRREESSAIVL
Subjt:  YFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G34560.1 unknown protein

6.0e-04

25.33

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Query:  FFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPI-AAAISAHYAAKLLAFAATPLFGFLLCNAIIVALLQFSHITPATHEPSDRIYEN
        F H   + S  I     +R  + LFR   L  L+     ++S+L   +  IS     +   F  +P F F + NAI++ LL  S    ++HEPS      
Subjt:  FFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPI-AAAISAHYAAKLLAFAATPLFGFLLCNAIIVALLQFSHITPATHEPSDRIYEN

Query:  LILTTGTAELPEVVYQDKQIISESAISSIHRADPDPDPESGFGDRKVMWRTLSEK----LKPREP---REKLRRSETEVRRNLERSPETWYF-----EED
            T T      +YQ+    SE     ++    +   +   G R    R+ S K    +KP E     + ++R  +E    +  S +         E+ 
Subjt:  LILTTGTAELPEVVYQDKQIISESAISSIHRADPDPDPESGFGDRKVMWRTLSEK----LKPREP---REKLRRSETEVRRNLERSPETWYF-----EED

Query:  LSGEEFQRRIEEFIAKEKRFRREESSAIV
        +S E+F+ +IE FIA++KR +++E   I+
Subjt:  LSGEEFQRRIEEFIAKEKRFRREESSAIV

AT5G66440.1 unknown protein

6.8e-16

32.24

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Query:  KAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALLQFS--HITPATHEPSDRIYENLI
        KAEK +  + R N      + FR   +C  L  + W  S+LP    IS  +  ++ A  +TPLF FLL N+I+V LL  S    T A       IY+  +
Subjt:  KAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALLQFS--HITPATHEPSDRIYENLI

Query:  LTTGTAELPE-------VVYQDKQIISESAISSIH----------RADPDPDPESGFGDRKVMWRTLSE-------KLKPREPREKLRRSET-----EVR
         +      P        +VY DKQ+I     S+ +            D D  P S     KV  R+ S+        +     +  L+RSET     E  
Subjt:  LTTGTAELPE-------VVYQDKQIISESAISSIH----------RADPDPDPESGFGDRKVMWRTLSE-------KLKPREPREKLRRSET-----EVR

Query:  RNLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVL
         + +   E  Y E+DLS EEFQ+ IE FIAK++ FRR+ES A+V+
Subjt:  RNLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIVL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGATTTGTTGTTCTTCCACAAAGCAGAGAAGGATTCAAACCCCATTCCCAGATGCAATCTCCTCCGAATGGCTTCCAAATTGTTCCGATTCCTACATCTCTGTTTCCT
CCTCGCCTCCCTCTCCTGGATCCTCTCCCGCCTCCCCATCGCCGCCGCCATCTCCGCCCATTACGCCGCCAAACTCCTCGCCTTCGCCGCCACTCCCCTCTTCGGATTCC
TCCTCTGCAACGCCATCATCGTCGCCCTCCTCCAATTCTCCCACATCACCCCCGCAACCCACGAACCATCCGATCGGATTTACGAAAATCTGATTCTAACAACCGGAACC
GCCGAGCTACCGGAGGTTGTGTATCAGGACAAACAGATCATTTCGGAGTCGGCGATCAGTTCAATCCATCGCGCAGATCCAGATCCAGATCCAGAATCAGGATTTGGCGA
TCGGAAAGTGATGTGGAGGACGCTGTCGGAGAAGCTGAAGCCGAGGGAGCCGAGGGAGAAGCTGCGGCGGTCGGAGACGGAGGTGCGCCGGAACCTGGAGCGGTCCCCGG
AGACTTGGTACTTTGAGGAGGATTTGAGCGGCGAGGAGTTTCAGCGGAGGATTGAGGAGTTTATAGCCAAAGAGAAGAGGTTTCGACGGGAAGAATCTTCAGCCATTGTA
CTGCTGCTTCCTTGCGACGGTTCATCTTTGGTTCAAAAATAA

mRNA sequence

Show/hide mRNA sequence

CGCAGTCCGAAATGGATTTGTTGTTCTTCCACAAAGCAGAGAAGGATTCAAACCCCATTCCCAGATGCAATCTCCTCCGAATGGCTTCCAAATTGTTCCGATTCCTACAT
CTCTGTTTCCTCCTCGCCTCCCTCTCCTGGATCCTCTCCCGCCTCCCCATCGCCGCCGCCATCTCCGCCCATTACGCCGCCAAACTCCTCGCCTTCGCCGCCACTCCCCT
CTTCGGATTCCTCCTCTGCAACGCCATCATCGTCGCCCTCCTCCAATTCTCCCACATCACCCCCGCAACCCACGAACCATCCGATCGGATTTACGAAAATCTGATTCTAA
CAACCGGAACCGCCGAGCTACCGGAGGTTGTGTATCAGGACAAACAGATCATTTCGGAGTCGGCGATCAGTTCAATCCATCGCGCAGATCCAGATCCAGATCCAGAATCA
GGATTTGGCGATCGGAAAGTGATGTGGAGGACGCTGTCGGAGAAGCTGAAGCCGAGGGAGCCGAGGGAGAAGCTGCGGCGGTCGGAGACGGAGGTGCGCCGGAACCTGGA
GCGGTCCCCGGAGACTTGGTACTTTGAGGAGGATTTGAGCGGCGAGGAGTTTCAGCGGAGGATTGAGGAGTTTATAGCCAAAGAGAAGAGGTTTCGACGGGAAGAATCTT
CAGCCATTGTACTGCTGCTTCCTTGCGACGGTTCATCTTTGGTTCAAAAATAACAAATTATGGAAATAATTAAAATATGAAAAAGAGAATTTGGCTGTTTTGTAATGTAC
AGTGTGAAAGGGTAAAATAGGTATTTGAGCTTTGTTGTTTAGGGGGGTCTGTTTGTCTGCGATTCGTCCTATGGTTGCTTTCTTGGAGGGCTTGCATTTCACCATCTCAC
TAATCTCTCATATGACTATGGAATCAAT

Protein sequence

Show/hide protein sequence

MDLLFFHKAEKDSNPIPRCNLLRMASKLFRFLHLCFLLASLSWILSRLPIAAAISAHYAAKLLAFAATPLFGFLLCNAIIVALLQFSHITPATHEPSDRIYENLILTTGT
AELPEVVYQDKQIISESAISSIHRADPDPDPESGFGDRKVMWRTLSEKLKPREPREKLRRSETEVRRNLERSPETWYFEEDLSGEEFQRRIEEFIAKEKRFRREESSAIV
LLLPCDGSSLVQK

Sed0004351 (gene) of Chayote v1 genome