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Sed0004352 (gene) of Chayote v1 genome

Gene IDSed0004352
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:37234406..37234675
RNA-Seq ExpressionSed0004352
SyntenySed0004352
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066754.1 hypothetical protein E6C27_scaffold271G00930 [Cucumis melo var. makuwa]6.6e-2264.77Show/hide
Query:  MSSKKFTMAALLMVALVLCQPDMSFGIRRFSNKEMKTASMGVVDVHVLLGALPRGPTPPSTPSERANPAPFSGTERTIVYTPSLGVGH
        M S+KF M ALL+VA VLCQ  MS GIR+ SNKEMK   MGV   ++LLGALP+GPTPPS PSER NPAPFS  +R +V  PS G+GH
Subjt:  MSSKKFTMAALLMVALVLCQPDMSFGIRRFSNKEMKTASMGVVDVHVLLGALPRGPTPPSTPSERANPAPFSGTERTIVYTPSLGVGH

KAG6607932.1 hypothetical protein SDJN03_01274, partial [Cucurbita argyrosperma subsp. sororia]7.1e-1663.01Show/hide
Query:  MSSKKFTMAALLMVALVLCQPDMSFGIRRFSNKEMKTASMGVVDVHVLLGALPRGPTPPSTPSERANPAPFSG
        M +KKFTMAA L +A +LCQP  +  IR F +K+ K  SMGVVD  +LLG+LPRGP PPS PS R NPAPFSG
Subjt:  MSSKKFTMAALLMVALVLCQPDMSFGIRRFSNKEMKTASMGVVDVHVLLGALPRGPTPPSTPSERANPAPFSG

KGN55050.1 hypothetical protein Csa_012928 [Cucumis sativus]1.3e-2063.64Show/hide
Query:  MSSKKFTMAALLMVALVLCQPDMSFGIRRFSNKEMKTASMGVVDVHVLLGALPRGPTPPSTPSERANPAPFSGTERTIVYTPSLGVGH
        M SKK  M ALL+VALVL Q  MS GIR+ SNKEMK   +GV   ++LLGALP+GPTPPS PSER NPAPFS  +R +V  PS G+GH
Subjt:  MSSKKFTMAALLMVALVLCQPDMSFGIRRFSNKEMKTASMGVVDVHVLLGALPRGPTPPSTPSERANPAPFSGTERTIVYTPSLGVGH

TrEMBL top hitse value%identityAlignment
A0A0A0KZH3 Uncharacterized protein6.1e-2163.64Show/hide
Query:  MSSKKFTMAALLMVALVLCQPDMSFGIRRFSNKEMKTASMGVVDVHVLLGALPRGPTPPSTPSERANPAPFSGTERTIVYTPSLGVGH
        M SKK  M ALL+VALVL Q  MS GIR+ SNKEMK   +GV   ++LLGALP+GPTPPS PSER NPAPFS  +R +V  PS G+GH
Subjt:  MSSKKFTMAALLMVALVLCQPDMSFGIRRFSNKEMKTASMGVVDVHVLLGALPRGPTPPSTPSERANPAPFSGTERTIVYTPSLGVGH

A0A5A7VHE0 Uncharacterized protein3.2e-2264.77Show/hide
Query:  MSSKKFTMAALLMVALVLCQPDMSFGIRRFSNKEMKTASMGVVDVHVLLGALPRGPTPPSTPSERANPAPFSGTERTIVYTPSLGVGH
        M S+KF M ALL+VA VLCQ  MS GIR+ SNKEMK   MGV   ++LLGALP+GPTPPS PSER NPAPFS  +R +V  PS G+GH
Subjt:  MSSKKFTMAALLMVALVLCQPDMSFGIRRFSNKEMKTASMGVVDVHVLLGALPRGPTPPSTPSERANPAPFSGTERTIVYTPSLGVGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGCAAAAAGTTCACGATGGCGGCATTGTTGATGGTGGCCTTGGTGCTGTGCCAACCTGACATGAGCTTTGGGATTAGGAGGTTTTCCAACAAGGAGATGAAGAC
GGCTTCAATGGGAGTGGTCGACGTCCACGTGCTGCTCGGTGCTCTCCCGAGAGGCCCAACACCCCCCTCCACCCCAAGCGAGCGAGCCAATCCTGCTCCCTTCAGTGGCA
CCGAACGGACCATCGTGTATACTCCGAGCCTTGGAGTTGGTCATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCAGCAAAAAGTTCACGATGGCGGCATTGTTGATGGTGGCCTTGGTGCTGTGCCAACCTGACATGAGCTTTGGGATTAGGAGGTTTTCCAACAAGGAGATGAAGAC
GGCTTCAATGGGAGTGGTCGACGTCCACGTGCTGCTCGGTGCTCTCCCGAGAGGCCCAACACCCCCCTCCACCCCAAGCGAGCGAGCCAATCCTGCTCCCTTCAGTGGCA
CCGAACGGACCATCGTGTATACTCCGAGCCTTGGAGTTGGTCATCATTGA
Protein sequenceShow/hide protein sequence
MSSKKFTMAALLMVALVLCQPDMSFGIRRFSNKEMKTASMGVVDVHVLLGALPRGPTPPSTPSERANPAPFSGTERTIVYTPSLGVGHH