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Sed0004354 (gene) of Chayote v1 genome

Gene IDSed0004354
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:10313630..10314078
RNA-Seq ExpressionSed0004354
SyntenySed0004354
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059447.1 hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa]1.5e-2375.29Show/hide
Query:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRRR
        MSVKKS SL+KA+EAKR  +H+AARK RRSFD CFS   P LP+E GKSLKEM+ +KLKTGI+KWAKAVVAYAR VS+RFGSRRR
Subjt:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRRR

KAG6575488.1 hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2680.95Show/hide
Query:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRR
        MSVKKSFSL+KA+EAKRPG+HDAARK RRSFD CFS+  P LP+E GKSLKEMD +KLK  IRKWAKAVVAYAR VSNRFGSRR
Subjt:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRR

KAG6593505.1 hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sororia]8.8e-2475.29Show/hide
Query:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRRR
        MSVKKS SL+KA+EAKR  +HDAARK RRSFD CFS+  P L +E GKSLKEMD +KLK+GIRKWAK+VVAYARQVS+RFGS RR
Subjt:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRRR

KEH18277.1 hypothetical protein MTR_8g015560 [Medicago truncatula]1.3e-1157.32Show/hide
Query:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGS
        MSVKKS S +     +   K  + +  RR FDRCFS+    + +EEGK LKEMD  KLK+ I+KWAKAVVAYARQVS RFGS
Subjt:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGS

KGN45542.1 hypothetical protein Csa_016865 [Cucumis sativus]2.6e-2374.12Show/hide
Query:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRRR
        MSVKKS SL+KA+EAKR  +H+AARK RRSFD CFS   P +P+E GKSLKEM+ +KLKTGI+KWAKAVVAYAR VS+RFGSRRR
Subjt:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRRR

TrEMBL top hitse value%identityAlignment
A0A067L8J0 Uncharacterized protein1.9e-1158.14Show/hide
Query:  MSVKKSFSL--SKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRR
        MSVKK+ SL  SK   A        + K RR F+RCFS+    +P+E GKSLKEMD  KLK  I++WAKAVVAYARQVS+RFGS R
Subjt:  MSVKKSFSL--SKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRR

A0A072TLH5 Uncharacterized protein6.4e-1257.32Show/hide
Query:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGS
        MSVKKS S +     +   K  + +  RR FDRCFS+    + +EEGK LKEMD  KLK+ I+KWAKAVVAYARQVS RFGS
Subjt:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGS

A0A0A0KB03 Uncharacterized protein1.2e-2374.12Show/hide
Query:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRRR
        MSVKKS SL+KA+EAKR  +H+AARK RRSFD CFS   P +P+E GKSLKEM+ +KLKTGI+KWAKAVVAYAR VS+RFGSRRR
Subjt:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRRR

A0A498IZM5 Uncharacterized protein1.9e-1156.79Show/hide
Query:  KKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRR
        +K+ SL+  +  K  G   AA++ R  FDRCFS     +  E GKSLKEMD +KLK+GI++WAKAVVAYARQVS+RFGS R
Subjt:  KKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRR

A0A5A7UXU0 Uncharacterized protein7.3e-2475.29Show/hide
Query:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRRR
        MSVKKS SL+KA+EAKR  +H+AARK RRSFD CFS   P LP+E GKSLKEM+ +KLKTGI+KWAKAVVAYAR VS+RFGSRRR
Subjt:  MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTGAAGAAGTCCTTCTCTCTATCGAAGGCCGACGAGGCCAAGCGTCCCGGGAAGCATGATGCTGCAAGAAAGCACAGGAGATCTTTCGATCGCTGCTTTTCAAA
CCCAGGGCCAACACTACCATTGGAAGAAGGGAAGTCTTTGAAAGAGATGGATCCAAAGAAGTTGAAGACTGGGATCCGGAAATGGGCAAAAGCCGTGGTGGCTTATGCCC
GCCAAGTAAGCAATCGTTTCGGAAGCAGGCGTCGCTAA
mRNA sequenceShow/hide mRNA sequence
CCTTGGCTGCTAGAGGAGCAGCCAAGAAGAAAAAAGGAAAAAATGTCTGTGAAGAAGTCCTTCTCTCTATCGAAGGCCGACGAGGCCAAGCGTCCCGGGAAGCATGATGC
TGCAAGAAAGCACAGGAGATCTTTCGATCGCTGCTTTTCAAACCCAGGGCCAACACTACCATTGGAAGAAGGGAAGTCTTTGAAAGAGATGGATCCAAAGAAGTTGAAGA
CTGGGATCCGGAAATGGGCAAAAGCCGTGGTGGCTTATGCCCGCCAAGTAAGCAATCGTTTCGGAAGCAGGCGTCGCTAATTGGACCGGATGATGCTCACATGGAATTCG
ACGACCATTAGAATAACTCTTATTATCTCTCCAACATGGGTATATTTTTTGTGAGAAGACGAAATCAAATTTGTTTCAATGGTGATACGTGCACGTTTTTTGGAGTCTTT
GGTTGGGGG
Protein sequenceShow/hide protein sequence
MSVKKSFSLSKADEAKRPGKHDAARKHRRSFDRCFSNPGPTLPLEEGKSLKEMDPKKLKTGIRKWAKAVVAYARQVSNRFGSRRR