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Sed0004371 (gene) of Chayote v1 genome

Gene IDSed0004371
OrganismSechium edule (Chayote v1)
DescriptionProlamin_like domain-containing protein
Genome locationLG03:3173450..3173683
RNA-Seq ExpressionSed0004371
SyntenySed0004371
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046835.1 hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa]8.6e-1869.7Show/hide
Query:  MVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK
        +VIL F I  + LV+ S   +DYNSPIW+ WVDEDRGYTLRPCLD +++AKCQVELY YYFNISKK
Subjt:  MVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK

KAA0046841.1 hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa]5.9e-1964.56Show/hide
Query:  MTKKTNTMATLMVILSFTIIFATLVRPSMA--VDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK
        M   TNT+  ++ IL   +  A LV PSMA   DDYNSPIWN WVDEDR   LRPCLDM+K+AKCQV+LY YYFNISKK
Subjt:  MTKKTNTMATLMVILSFTIIFATLVRPSMA--VDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK

KAE8646662.1 hypothetical protein Csa_004797, partial [Cucumis sativus]2.5e-1762.16Show/hide
Query:  KTNTMATLMVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK
        KTN M  ++++LS TI  A LV+P    +DYNS IWN W+DEDR +TLRPCLD +++AKCQVELY YYFNISK+
Subjt:  KTNTMATLMVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK

KAG6575249.1 hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sororia]5.8e-1453.25Show/hide
Query:  MTKKTNTMATLMVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK
        M K+T+T+   MV+L   +     VR + A  DYNSPIW+ W+DEDR Y LRPCL+++K+AKCQV+LY  YFN+SK+
Subjt:  MTKKTNTMATLMVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK

KAG6578867.1 hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]4.6e-1974.24Show/hide
Query:  MVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK
        MVIL   I  A L +PS A DDYNSPIW+ WVDEDRG  LRPCLDM+K+AKCQVELY YYFNISKK
Subjt:  MVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK

TrEMBL top hitse value%identityAlignment
A0A0A0KEB8 Prolamin_like domain-containing protein1.2e-1761.04Show/hide
Query:  MTKKTNTMATLMVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK
        M  KTN M  ++++LS  I  A LV+ S   +DYNS IWN W+DEDR +TLRPCLD +++AKCQVELY YYFNISKK
Subjt:  MTKKTNTMATLMVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK

A0A0A0KQ41 Prolamin_like domain-containing protein4.9e-1146.75Show/hide
Query:  MTKKTNTMATLMVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK
        M   T  +  ++++    +    LV+PS   D+  S IW+ W+DEDR  TL PCL M+++ KCQVELY YYFNISKK
Subjt:  MTKKTNTMATLMVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK

A0A0A0L535 Prolamin_like domain-containing protein1.8e-0842.5Show/hide
Query:  MTKKTNTMATLMVILSFTIIFA---TLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK
        M K +N+   L++++  +++      LV PS+  D+  S IW+ W+D+DR   L  CL ++K+ KCQVELY YYFN SKK
Subjt:  MTKKTNTMATLMVILSFTIIFA---TLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK

A0A5A7TZR1 Prolamin_like domain-containing protein2.9e-1964.56Show/hide
Query:  MTKKTNTMATLMVILSFTIIFATLVRPSMA--VDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK
        M   TNT+  ++ IL   +  A LV PSMA   DDYNSPIWN WVDEDR   LRPCLDM+K+AKCQV+LY YYFNISKK
Subjt:  MTKKTNTMATLMVILSFTIIFATLVRPSMA--VDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK

A0A5D3C280 Prolamin_like domain-containing protein4.2e-1869.7Show/hide
Query:  MVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK
        +VIL F I  + LV+ S   +DYNSPIW+ WVDEDRGYTLRPCLD +++AKCQVELY YYFNISKK
Subjt:  MVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGAAAACCAACACAATGGCAACATTAATGGTGATTCTGTCGTTCACAATAATTTTTGCAACCTTAGTTCGACCTTCGATGGCAGTTGACGATTACAATTCACC
TATATGGAATACATGGGTAGACGAGGATAGAGGATATACCCTACGACCATGTTTGGATATGGTGAAGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATA
TAAGTAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAGAAAACCAACACAATGGCAACATTAATGGTGATTCTGTCGTTCACAATAATTTTTGCAACCTTAGTTCGACCTTCGATGGCAGTTGACGATTACAATTCACC
TATATGGAATACATGGGTAGACGAGGATAGAGGATATACCCTACGACCATGTTTGGATATGGTGAAGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATA
TAAGTAAGAAATAA
Protein sequenceShow/hide protein sequence
MTKKTNTMATLMVILSFTIIFATLVRPSMAVDDYNSPIWNTWVDEDRGYTLRPCLDMVKNAKCQVELYKYYFNISKK