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Sed0004413 (gene) of Chayote v1 genome

Gene IDSed0004413
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:8922477..8925070
RNA-Seq ExpressionSed0004413
SyntenySed0004413
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443054.1 PREDICTED: uncharacterized protein LOC103486764 [Cucumis melo]2.4e-4175Show/hide
Query:  MDSPIAKSVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKR-GNEPCESPA----AERNWLIPPAGRKSVVLKKIGIGRSHHQQLRIRDFRNKS
        MDS I  +VQHV +KSSDELLRKFAEV +ESG   RL   VKRRRKR  NE C+SP+     ER WLI P GRKSVVLKK+GIG    QQLRIRDFRNKS
Subjt:  MDSPIAKSVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKR-GNEPCESPA----AERNWLIPPAGRKSVVLKKIGIGRSHHQQLRIRDFRNKS

Query:  ILSAIQKTWRKTVEGASKVLLEKHYNTHRRLISDIV
        IL AIQKTWR+TVEGASKVLLEKHYNTHRRLISDIV
Subjt:  ILSAIQKTWRKTVEGASKVLLEKHYNTHRRLISDIV
XP_022935142.1 uncharacterized protein LOC111442101 [Cucurbita moschata]8.3e-4276.92Show/hide
Query:  SVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGNEPCESPA----AERNWLIPPAGRKSVVLKKIGI--GRSHHQQLRIRDFRNKSILSAIQ
        SVQHV +KSSD+LL+KFAEV +ESG   RLS  VKRRR+R NE CESP+     ER WLIPPAGRKSVVLKKIGI  G    QQLRIRDFRNKS L AIQ
Subjt:  SVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGNEPCESPA----AERNWLIPPAGRKSVVLKKIGI--GRSHHQQLRIRDFRNKSILSAIQ

Query:  KTWRKTVEGASKVLLEKHYNTHRRLISDIV
        KTWR+TVEGASKVLLEKHYNTHRRLISDIV
Subjt:  KTWRKTVEGASKVLLEKHYNTHRRLISDIV
XP_022983155.1 uncharacterized protein LOC111481793 [Cucurbita maxima]1.4e-4176.92Show/hide
Query:  SVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGNEPCESPA----AERNWLIPPAGRKSVVLKKIGI--GRSHHQQLRIRDFRNKSILSAIQ
        SVQHV +KSSD+LL+KFAEV +ESG   RLS  VKRRR+R NE CESP+     ER WLIPPAGRKSVVLKKIGI  G    QQLRIRDFRNKS L AIQ
Subjt:  SVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGNEPCESPA----AERNWLIPPAGRKSVVLKKIGI--GRSHHQQLRIRDFRNKSILSAIQ

Query:  KTWRKTVEGASKVLLEKHYNTHRRLISDIV
        KTWR+TVEGASKVLLEKHYNTHRRLISDIV
Subjt:  KTWRKTVEGASKVLLEKHYNTHRRLISDIV
XP_023526943.1 uncharacterized protein LOC111790316 [Cucurbita pepo subsp. pepo]4.1e-4176.15Show/hide
Query:  SVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGNEPCESPA----AERNWLIPPAGRKSVVLKKIGI--GRSHHQQLRIRDFRNKSILSAIQ
        SVQHV +KSSD+LL+KFAEV +ESG   RLS  VKRRR+R NE CESP+     ER WLIPPAGRKSVVLKKIGI  G    QQLRIRDFRNKS L AIQ
Subjt:  SVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGNEPCESPA----AERNWLIPPAGRKSVVLKKIGI--GRSHHQQLRIRDFRNKSILSAIQ

Query:  KTWRKTVEGASKVLLEKHYNTHRRLISDIV
        KTWR+TVEGASKV LEKHYNTHRRLISDIV
Subjt:  KTWRKTVEGASKVLLEKHYNTHRRLISDIV
XP_038905728.1 uncharacterized protein LOC120091691 [Benincasa hispida]4.4e-4376.47Show/hide
Query:  MDSPIAKSVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGNEPCESPAA-----ERNWLIPPAGRKSVVLKKIGIGRSHHQQLRIRDFRNKS
        MDS IA +VQHV +KSSDELLRKFAEV +ES    RLS  VKRRRKR NE CESP++     ER WLI P GRKSVVLKK+GIG    QQLRIRDFRNKS
Subjt:  MDSPIAKSVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGNEPCESPAA-----ERNWLIPPAGRKSVVLKKIGIGRSHHQQLRIRDFRNKS

Query:  ILSAIQKTWRKTVEGASKVLLEKHYNTHRRLISDIV
        IL AIQKTWR+TVEGASKVLLEKHYNTHRRLISDIV
Subjt:  ILSAIQKTWRKTVEGASKVLLEKHYNTHRRLISDIV
TrEMBL top hitse value%identityAlignment
A0A0A0LGY2 Uncharacterized protein7.6e-4173.91Show/hide
Query:  MDSPIAKSVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGN--EPCESPA-----AERNWLIPPAGRKSVVLKKIGIGRSHHQQLRIRDFRN
        MDS I  +VQHV +KSSDELLRKFAEV +ESG   RL   VKRRRKR N  E C+SP+      ER WLI P GRKSVVLKK+GIG    QQLRIRDFRN
Subjt:  MDSPIAKSVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGN--EPCESPA-----AERNWLIPPAGRKSVVLKKIGIGRSHHQQLRIRDFRN

Query:  KSILSAIQKTWRKTVEGASKVLLEKHYNTHRRLISDIV
        KSIL AIQKTWR+TVEGASKVLLEKHYNTHRRLISDIV
Subjt:  KSILSAIQKTWRKTVEGASKVLLEKHYNTHRRLISDIV
A0A1S3B7W3 uncharacterized protein LOC1034867641.2e-4175Show/hide
Query:  MDSPIAKSVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKR-GNEPCESPA----AERNWLIPPAGRKSVVLKKIGIGRSHHQQLRIRDFRNKS
        MDS I  +VQHV +KSSDELLRKFAEV +ESG   RL   VKRRRKR  NE C+SP+     ER WLI P GRKSVVLKK+GIG    QQLRIRDFRNKS
Subjt:  MDSPIAKSVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKR-GNEPCESPA----AERNWLIPPAGRKSVVLKKIGIGRSHHQQLRIRDFRNKS

Query:  ILSAIQKTWRKTVEGASKVLLEKHYNTHRRLISDIV
        IL AIQKTWR+TVEGASKVLLEKHYNTHRRLISDIV
Subjt:  ILSAIQKTWRKTVEGASKVLLEKHYNTHRRLISDIV
A0A5A7TJU8 Uncharacterized protein1.2e-4175Show/hide
Query:  MDSPIAKSVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKR-GNEPCESPA----AERNWLIPPAGRKSVVLKKIGIGRSHHQQLRIRDFRNKS
        MDS I  +VQHV +KSSDELLRKFAEV +ESG   RL   VKRRRKR  NE C+SP+     ER WLI P GRKSVVLKK+GIG    QQLRIRDFRNKS
Subjt:  MDSPIAKSVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKR-GNEPCESPA----AERNWLIPPAGRKSVVLKKIGIGRSHHQQLRIRDFRNKS

Query:  ILSAIQKTWRKTVEGASKVLLEKHYNTHRRLISDIV
        IL AIQKTWR+TVEGASKVLLEKHYNTHRRLISDIV
Subjt:  ILSAIQKTWRKTVEGASKVLLEKHYNTHRRLISDIV
A0A6J1F4R1 uncharacterized protein LOC1114421014.0e-4276.92Show/hide
Query:  SVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGNEPCESPA----AERNWLIPPAGRKSVVLKKIGI--GRSHHQQLRIRDFRNKSILSAIQ
        SVQHV +KSSD+LL+KFAEV +ESG   RLS  VKRRR+R NE CESP+     ER WLIPPAGRKSVVLKKIGI  G    QQLRIRDFRNKS L AIQ
Subjt:  SVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGNEPCESPA----AERNWLIPPAGRKSVVLKKIGI--GRSHHQQLRIRDFRNKSILSAIQ

Query:  KTWRKTVEGASKVLLEKHYNTHRRLISDIV
        KTWR+TVEGASKVLLEKHYNTHRRLISDIV
Subjt:  KTWRKTVEGASKVLLEKHYNTHRRLISDIV
A0A6J1J4Z4 uncharacterized protein LOC1114817936.9e-4276.92Show/hide
Query:  SVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGNEPCESPA----AERNWLIPPAGRKSVVLKKIGI--GRSHHQQLRIRDFRNKSILSAIQ
        SVQHV +KSSD+LL+KFAEV +ESG   RLS  VKRRR+R NE CESP+     ER WLIPPAGRKSVVLKKIGI  G    QQLRIRDFRNKS L AIQ
Subjt:  SVQHVTKKSSDELLRKFAEVETESG---RLSKAVKRRRKRGNEPCESPA----AERNWLIPPAGRKSVVLKKIGI--GRSHHQQLRIRDFRNKSILSAIQ

Query:  KTWRKTVEGASKVLLEKHYNTHRRLISDIV
        KTWR+TVEGASKVLLEKHYNTHRRLISDIV
Subjt:  KTWRKTVEGASKVLLEKHYNTHRRLISDIV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G42110.1 unknown protein2.5e-2042.45Show/hide
Query:  DSPIAKSVQHVTKKSSDELLRKFAEVETESGRLSKAVKRRRKRGN----------EPCESPAAERNWLI--PPAGRKSVVLKKIGIGRSHHQQLRIRDFR
        ++ I   + HV KKSSDELLRKFA+ + +    SK+ KRR+K             E   S   ER  L+  P + R+S+ ++++  G+SH         R
Subjt:  DSPIAKSVQHVTKKSSDELLRKFAEVETESGRLSKAVKRRRKRGN----------EPCESPAAERNWLI--PPAGRKSVVLKKIGIGRSHHQQLRIRDFR

Query:  NKSILSAIQKTWRKTVEGASKVLLEKHYNTHRRLISDIV
        NKS++  I KTWRKT+EGAS+V +EKHYN HRRL +D+V
Subjt:  NKSILSAIQKTWRKTVEGASKVLLEKHYNTHRRLISDIV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCTCCCATTGCCAAAAGTGTTCAGCACGTTACTAAGAAGTCTTCTGATGAGCTTTTGAGGAAGTTTGCTGAGGTGGAGACGGAGTCGGGGAGGTTGTCGAAGGC
GGTGAAGCGGCGGCGGAAGAGGGGAAATGAGCCGTGTGAGAGCCCGGCGGCGGAGCGGAACTGGCTGATTCCGCCGGCGGGGAGGAAGTCGGTTGTGTTGAAGAAAATTG
GGATTGGAAGGTCTCATCATCAGCAGCTTAGGATTAGAGATTTCAGAAACAAATCTATCCTTTCTGCCATTCAAAAGACATGGCGAAAAACAGTGGAAGGGGCTTCAAAG
GTGTTATTAGAGAAACACTACAACACCCACAGACGTTTGATAAGTGACATTGTCTGA
mRNA sequenceShow/hide mRNA sequence
GTTTAATTTCCGGCTTTATAATTATAAGCCCACAATTTGAACCCATTTCAATTTATTTCAGCAATGGACTCTCCCATTGCCAAAAGTGTTCAGCACGTTACTAAGAAGTC
TTCTGATGAGCTTTTGAGGAAGTTTGCTGAGGTGGAGACGGAGTCGGGGAGGTTGTCGAAGGCGGTGAAGCGGCGGCGGAAGAGGGGAAATGAGCCGTGTGAGAGCCCGG
CGGCGGAGCGGAACTGGCTGATTCCGCCGGCGGGGAGGAAGTCGGTTGTGTTGAAGAAAATTGGGATTGGAAGGTCTCATCATCAGCAGCTTAGGATTAGAGATTTCAGA
AACAAATCTATCCTTTCTGCCATTCAAAAGACATGGCGAAAAACAGTGGAAGGGGCTTCAAAGGTGTTATTAGAGAAACACTACAACACCCACAGACGTTTGATAAGTGA
CATTGTCTGATTTTTCTTTCTCTTTCTTTTCTGGCTTTTATTAAATTATTTCAGGAGGCTGAAATCTCTATTTTACCCTCCTTATTATATCGTCTCTTAATGTCATTTAT
AATATTTGTTCCTATATTGC
Protein sequenceShow/hide protein sequence
MDSPIAKSVQHVTKKSSDELLRKFAEVETESGRLSKAVKRRRKRGNEPCESPAAERNWLIPPAGRKSVVLKKIGIGRSHHQQLRIRDFRNKSILSAIQKTWRKTVEGASK
VLLEKHYNTHRRLISDIV