; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004424 (gene) of Chayote v1 genome

Gene IDSed0004424
OrganismSechium edule (Chayote v1)
DescriptionHTH-type transcriptional regulator protein ptxE
Genome locationLG05:43177635..43178339
RNA-Seq ExpressionSed0004424
SyntenySed0004424
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605242.1 hypothetical protein SDJN03_02559, partial [Cucurbita argyrosperma subsp. sororia]9.5e-5376.43Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MGICISSDS N STAKLIL+DGTLLE+SYPVKVSYVL KDPA+FICNSD+MDF+DVV+AVD  DELQLG LYFALPLE+LN+PL A++MAALAVKASSAL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRK-----VGSGRSSKFTAKLSAIPE
        MKAGGGG EKCGSRR    PV F +E L K PRK      GSG S KFTAKL AIPE
Subjt:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRK-----VGSGRSSKFTAKLSAIPE

XP_022149511.1 uncharacterized protein LOC111017924 [Momordica charantia]7.5e-5882.58Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MGICISSDS N +TAKLILTDGTLLE+SYPVKVSYVLQKDPASFICNSDEMDFDDVVSA+D  DELQLGQLYFALPL+RLNQPL A+EMAALAVKAS+AL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRKV---GSGRSSKFTAKLSAIPE
        MKAGG   EKCGSRRTAISP  F DE  GK  R V   GSGR  KFTAKLSAIPE
Subjt:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRKV---GSGRSSKFTAKLSAIPE

XP_022947655.1 uncharacterized protein LOC111451454 [Cucurbita moschata]1.9e-5376.43Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MGICISSDS N STAKLIL+DGTLLE+SYPVKVSYVL KDPASFICNSD+MDF+DVV+AVD  DELQLGQLYFALPLE+LN+PL A++MAALAVKASSAL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRK-----VGSGRSSKFTAKLSAIPE
        MKAGGGG EKCGSRR  +    F +E L K PRK      GSG S KFTAKL AIPE
Subjt:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRK-----VGSGRSSKFTAKLSAIPE

XP_023007426.1 uncharacterized protein LOC111499928 [Cucurbita maxima]4.3e-5376.43Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MGICISSDS N STAKLIL+DGTLLE+SYPVKVSYVLQKDPASFICNSD+MDF+DVV+AVD  DELQLGQLYFALPLE+LN+PL A++MAALAVKASSAL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRK-----VGSGRSSKFTAKLSAIPE
        MKAGGGG EKCGSRR    PV F +E L K PR+       +G S KFTAKL AIPE
Subjt:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRK-----VGSGRSSKFTAKLSAIPE

XP_038902080.1 uncharacterized protein LOC120088720 [Benincasa hispida]1.2e-6083.87Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MGIC+SSD+ N +TAKLILTDGTL+EFSYPVKVSY+LQK PASFICNSDEMDFDDVV AVD  DELQLGQLYFALPL+RLNQPLQA+EMAALAVKASSAL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPR---KVGSGRSSKFTAKLSAIPE
        MKAGGGG EKCGSRRTAISPV F DE   K PR   K GSGRS KFTAKLSAIPE
Subjt:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPR---KVGSGRSSKFTAKLSAIPE

TrEMBL top hitse value%identityAlignment
A0A5A7TWF7 HTH-type transcriptional regulator protein ptxE6.6e-5275.32Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MGIC+SSDS N +TAKLIL DGTL+E+SYPVKVSYVLQK P+SFICNSD+MDFDDVV AVD  DELQLGQLYFALPLERLNQ +QA+EMAALAVKASSAL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MK-AGGGGVEKCGSRRTAISPVG--FPDEGLGKAPRKVG---SGRSSKFTAKLSAIPE
        MK  GGGG+EKCGS+ TA+ PVG    +EG  K PRK G    G S KF AKLSAIPE
Subjt:  MK-AGGGGVEKCGSRRTAISPVG--FPDEGLGKAPRKVG---SGRSSKFTAKLSAIPE

A0A6J1D8L2 uncharacterized protein LOC1110179243.6e-5882.58Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MGICISSDS N +TAKLILTDGTLLE+SYPVKVSYVLQKDPASFICNSDEMDFDDVVSA+D  DELQLGQLYFALPL+RLNQPL A+EMAALAVKAS+AL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRKV---GSGRSSKFTAKLSAIPE
        MKAGG   EKCGSRRTAISP  F DE  GK  R V   GSGR  KFTAKLSAIPE
Subjt:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRKV---GSGRSSKFTAKLSAIPE

A0A6J1G7I2 uncharacterized protein LOC1114514549.3e-5476.43Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MGICISSDS N STAKLIL+DGTLLE+SYPVKVSYVL KDPASFICNSD+MDF+DVV+AVD  DELQLGQLYFALPLE+LN+PL A++MAALAVKASSAL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRK-----VGSGRSSKFTAKLSAIPE
        MKAGGGG EKCGSRR  +    F +E L K PRK      GSG S KFTAKL AIPE
Subjt:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRK-----VGSGRSSKFTAKLSAIPE

A0A6J1I7K7 uncharacterized protein LOC1114703501.7e-5274.84Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MGICISSDS N +TAKLILTDGTLLEFSYPVKVS++L K PA+FICNSD+MDFDD V AV   D LQLG LYFALPL+RLNQPL  +EMAALAVKASSAL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRK---VGSGRSSKFTAKLSAIPE
        +KAG GG EK GSRRTA+SPV F DE   K PR+    GSGR  KF AKLSAIPE
Subjt:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRK---VGSGRSSKFTAKLSAIPE

A0A6J1L0H7 uncharacterized protein LOC1114999282.1e-5376.43Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MGICISSDS N STAKLIL+DGTLLE+SYPVKVSYVLQKDPASFICNSD+MDF+DVV+AVD  DELQLGQLYFALPLE+LN+PL A++MAALAVKASSAL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRK-----VGSGRSSKFTAKLSAIPE
        MKAGGGG EKCGSRR    PV F +E L K PR+       +G S KFTAKL AIPE
Subjt:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRK-----VGSGRSSKFTAKLSAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein1.5e-1638.97Show/hide
Query:  MGICISSDS----ANASTAKLILTDGTLLEFSYPVKVSYVLQKDPAS----------FICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQA
        MG+C+S +     ++++TAK++  +G L E+  PV  S VL+ +  S          F+CNSD + +DD + A+++ + LQ  Q+YF LP+ +    L A
Subjt:  MGICISSDS----ANASTAKLILTDGTLLEFSYPVKVSYVLQKDPAS----------FICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQA

Query:  KEMAALAVKASSALMKAGGGGVEKCGSRRTA-ISPV
         +MAALAVKAS A+ KA G   +K   RR+  ISPV
Subjt:  KEMAALAVKASSALMKAGGGGVEKCGSRRTA-ISPV

AT2G23690.1 unknown protein1.1e-3857.32Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MGIC S +S   +TAKLIL DG ++EF+ PVKV YVLQK+P  FICNSD+MDFD+VVSA+ A +E QLGQLYFALPL  L+  L+A+EMAALAVKASSAL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MKAGGG-GVEKCGSRRTAISPVGFPDEGL-----------GKAPRKVGSGRSSKFTAKLSAIPE
        M++GG  G +KC  RR  +SPV F    +           GK     GSGR  K+ AKLS I E
Subjt:  MKAGGG-GVEKCGSRRTAISPVGFPDEGL-----------GKAPRKVGSGRSSKFTAKLSAIPE

AT3G50800.1 unknown protein2.8e-3455.35Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MG C S +S    TAKLIL DGTL EFS PVKV  +LQK+P SF+CNSD+MDFDD V AV   ++L+ G+LYF LPL  LN PL+A EMAALAVKASSAL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MKAGGGG-------VEKCGSRRTAISPVGFPDEGLGKAPRKVGSGRSSKFTAKLSAIPE
         K+GGGG       V +C  RR   +  G      G+     G GR  KFTA+LS+I E
Subjt:  MKAGGGG-------VEKCGSRRTAISPVGFPDEGLGKAPRKVGSGRSSKFTAKLSAIPE

AT4G37240.1 unknown protein3.0e-3653.76Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MGIC SS+S   +TAKLIL DG ++EF+ PVKV YVL K P  FICNSD+MDFDD V+A+ A +ELQLGQ+YFALPL  L QPL+A+EMAALAVKASSAL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MKAGGGGVEKCGSRRTAISP---------VGFPDE--GLGKAPRKVGSG----------RSSKFTAKLSAIPE
        M+ GGG     G RR  + P         VG  D+  G G   RKV +G          R   + A+LS I E
Subjt:  MKAGGGGVEKCGSRRTAISP---------VGFPDE--GLGKAPRKVGSG----------RSSKFTAKLSAIPE

AT5G66580.1 unknown protein8.1e-3454.14Show/hide
Query:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL
        MG C S +S  + +AKLIL DGTL EFS PVKV  +LQK+P SF+CNSDEMDFDD VSAV   +EL+ GQLYF LPL  LN PL+A+EMAALAVKASSAL
Subjt:  MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSAL

Query:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRKVGSGR-----SSKFTAKLSAIPE
         K+GG G    G      S   +  + +       G GR       +FTA LS I E
Subjt:  MKAGGGGVEKCGSRRTAISPVGFPDEGLGKAPRKVGSGR-----SSKFTAKLSAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATTTGCATTTCCTCCGATTCGGCCAACGCTTCAACCGCGAAACTGATTCTCACCGACGGAACTTTGCTGGAATTTTCGTACCCAGTTAAGGTCTCTTACGTGTT
ACAGAAAGATCCGGCGAGTTTCATCTGCAACTCCGACGAGATGGACTTCGACGACGTCGTATCCGCCGTGGACGCCCGCGACGAGCTCCAACTTGGCCAGCTGTACTTCG
CGCTGCCGTTGGAGCGGCTGAACCAGCCGCTTCAGGCGAAGGAAATGGCGGCGTTGGCCGTGAAGGCAAGCTCGGCGCTCATGAAGGCCGGCGGCGGTGGGGTCGAGAAA
TGTGGTTCGCGGCGGACGGCGATCTCGCCGGTGGGATTTCCCGATGAGGGGCTTGGGAAGGCGCCGAGGAAAGTGGGGAGTGGCAGAAGTAGTAAATTTACGGCGAAGTT
GAGTGCAATTCCGGAATGA
mRNA sequenceShow/hide mRNA sequence
TCACAGACGAACAAGTCGGTCTCGCCTGACTCACTGAGTTAACTCAACTCGGAACCGATTCACCCGAAAAATGGGCATTTGCATTTCCTCCGATTCGGCCAACGCTTCAA
CCGCGAAACTGATTCTCACCGACGGAACTTTGCTGGAATTTTCGTACCCAGTTAAGGTCTCTTACGTGTTACAGAAAGATCCGGCGAGTTTCATCTGCAACTCCGACGAG
ATGGACTTCGACGACGTCGTATCCGCCGTGGACGCCCGCGACGAGCTCCAACTTGGCCAGCTGTACTTCGCGCTGCCGTTGGAGCGGCTGAACCAGCCGCTTCAGGCGAA
GGAAATGGCGGCGTTGGCCGTGAAGGCAAGCTCGGCGCTCATGAAGGCCGGCGGCGGTGGGGTCGAGAAATGTGGTTCGCGGCGGACGGCGATCTCGCCGGTGGGATTTC
CCGATGAGGGGCTTGGGAAGGCGCCGAGGAAAGTGGGGAGTGGCAGAAGTAGTAAATTTACGGCGAAGTTGAGTGCAATTCCGGAATGATTTCGGTTAGGGGTGAAATTG
TAAATATGATATGTTTAGTTTGGTTTTTTGGGGAGAGTTGCTTTATGTGGATGTTTTGTTTCTTCTGCATCCCATGGCAATTGCATCAGATTCTCTCTTGCCACTTTTAC
ATATTTACCCTTTCTTACTAAATAAAATCCTAAAATTAAATGTTA
Protein sequenceShow/hide protein sequence
MGICISSDSANASTAKLILTDGTLLEFSYPVKVSYVLQKDPASFICNSDEMDFDDVVSAVDARDELQLGQLYFALPLERLNQPLQAKEMAALAVKASSALMKAGGGGVEK
CGSRRTAISPVGFPDEGLGKAPRKVGSGRSSKFTAKLSAIPE