CuGenDBv2

Gene ID	Sed0004436
Organism	Sechium edule (Chayote v1)
Description	30S ribosomal protein S3, chloroplastic
Genome location	LG13:18596740..18597436
RNA-Seq Expression	Sed0004436
Synteny	Sed0004436
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	IPR001351 - Ribosomal protein S3, C-terminal IPR005704 - Ribosomal protein S3, bacterial-type IPR009019 - K homology domain superfamily, prokaryotic type IPR015946 - K homology domain-like, alpha/beta IPR018280 - Ribosomal protein S3, conserved site IPR036419 - Ribosomal protein S3, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

YP_009560874.1 ribosomal protein S3 [Trichosanthes kirilowii]

5.3e-93

84.4

Show/hide

Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLGATQGHHSIWF                           MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIE GSRKIEELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDEQ
Subjt:  RTIYGVLGIKIWIFVDEQ

YP_009752113.1 ribosomal protein S3 [Dendrosicyos socotranus]

1.2e-92

83.49

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Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLGATQGHHS+WF                           MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIE GSRKIEELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQAGTKGIQ+QIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDEQ
Subjt:  RTIYGVLGIKIWIFVDEQ

YP_009752281.1 ribosomal protein S3 [Trichosanthes baviensis]

5.3e-93

84.4

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Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLGATQGHHSIWF                           MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIE GSRKIEELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDEQ
Subjt:  RTIYGVLGIKIWIFVDEQ

YP_009752534.1 ribosomal protein S3 [Trichosanthes tubiflora]

1.2e-92

83.94

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Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLGATQGHHSIWF                           MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIE GSRKIEELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        K+LNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDEQ
Subjt:  RTIYGVLGIKIWIFVDEQ

YP_009945453.1 ribosomal protein S3 [Sechium edule]

8.1e-94

84.86

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Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLGATQGHHSIWF                           MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDEQ
Subjt:  RTIYGVLGIKIWIFVDEQ

TrEMBL top hits

e value

%identity

Alignment

A0A6H0EPH7 30S ribosomal protein S3, chloroplastic

3.9e-94

84.86

Show/hide

Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLGATQGHHSIWF                           MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDEQ
Subjt:  RTIYGVLGIKIWIFVDEQ

A0A6H0EQW5 30S ribosomal protein S3, chloroplastic

2.6e-93

84.4

Show/hide

Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLGATQGHHSIWF                           MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIE GSRKIEELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDEQ
Subjt:  RTIYGVLGIKIWIFVDEQ

A0A6H0ETZ7 30S ribosomal protein S3, chloroplastic

2.6e-93

84.4

Show/hide

Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLGATQGHHSIWF                           MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIE GSRKIEELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDEQ
Subjt:  RTIYGVLGIKIWIFVDEQ

A0A6H0EV08 30S ribosomal protein S3, chloroplastic

2.6e-93

84.4

Show/hide

Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLGATQGHHSIWF                           MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIE GSRKIEELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDEQ
Subjt:  RTIYGVLGIKIWIFVDEQ

A0A6M3RWJ0 30S ribosomal protein S3, chloroplastic

2.6e-93

84.4

Show/hide

Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLGATQGHHSIWF                           MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIE GSRKIEELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDEQ
Subjt:  RTIYGVLGIKIWIFVDEQ

SwissProt top hits

e value

%identity

Alignment

A0ZZ73 30S ribosomal protein S3, chloroplastic

2.5e-85

75.23

Show/hide

Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLG TQ HHS+WF                            R+ SGVEGIARIEIQKR+DLIQVII+MGFPKLLIED  RK+EELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELN +NRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQA TKGIQ+QIAGRIDGKEIARVEWIREGRVPLQTI AKI+YC Y V
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIF+DE+
Subjt:  RTIYGVLGIKIWIFVDEQ

A4QJF3 30S ribosomal protein S3, chloroplastic

1.4e-85

76.15

Show/hide

Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLG TQ HHS+WF                           +RI SG+EGIARIEIQKRIDLIQVII+MGFPKLLIED  R++EELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELN VNRKLNIAITRI  PYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQA TKGIQVQIAGRIDGKEIARVEWIREGRVPLQTI AKIDYC Y V
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDE+
Subjt:  RTIYGVLGIKIWIFVDEQ

A4QJN7 30S ribosomal protein S3, chloroplastic

1.4e-85

76.15

Show/hide

Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLG TQ HHS+WF                           +RI SG+EGIARIEIQKRIDLIQVII+MGFPKLLIED  R++EELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELN VNRKLNIAITRI  PYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQA TKGIQVQIAGRIDGKEIARVEWIREGRVPLQTI AKIDYC Y V
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDE+
Subjt:  RTIYGVLGIKIWIFVDEQ

A4QL57 30S ribosomal protein S3, chloroplastic

1.4e-85

76.15

Show/hide

Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLG TQ HHS+WF                           +RI SG+EGIARIEIQKRIDLIQ+II+MGFPKLLIED  R+IEELQ+NVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELN VNRKLNIAITRI NPYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQA TKGIQVQIAGRIDGKEIARVEWIREGRVPLQTI AKIDYC Y V
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDE+
Subjt:  RTIYGVLGIKIWIFVDEQ

Q4VZN0 30S ribosomal protein S3, chloroplastic

6.5e-94

81.65

Show/hide

Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLGATQGHHS+WF                           MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKL+I+DGSRKIEELQ+NVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KE NS NRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV F ++ +KAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYG+LGIKIWIFVDEQ
Subjt:  RTIYGVLGIKIWIFVDEQ

Arabidopsis top hits

e value

%identity

Alignment

ATCG00800.1 structural constituent of ribosome

3.0e-86

75.69

Show/hide

Query:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ
        MGQKINPLGFRLG TQ HHS+WF                           +RI SG+EGIARIEIQKRIDLIQ+II+MGFPKLLIED  R++EELQMNVQ
Subjt:  MGQKINPLGFRLGATQGHHSIWF---------------------------MRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQ

Query:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV
        KELN VNRKLNIAITRI NPYG PNILAEFIAGQLKNRV F ++ +KAIELTEQA TKGIQVQIAGRIDGKEIARVEWIREGRVPLQTI AKIDYC Y V
Subjt:  KELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRV-FSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPV

Query:  RTIYGVLGIKIWIFVDEQ
        RTIYGVLGIKIWIFVDE+
Subjt:  RTIYGVLGIKIWIFVDEQ

ATMG00090.1 structural constituent of ribosome;protein binding

1.8e-06

31.25

Show/hide

Query:  NSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKN--RVFSQSNEKAIELTEQAGTKGIQVQIAGRI-DGKEIARVEWIREGRVPLQTIRAKIDYCCYPVR
        N  N K  I   +I + Y   + +A+ I+ QLKN  R F     K ++   + G +GI++  +GR+ D  E A+ +  +  +        KIDY    V 
Subjt:  NSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKN--RVFSQSNEKAIELTEQAGTKGIQVQIAGRI-DGKEIARVEWIREGRVPLQTIRAKIDYCCYPVR

Query:  TIYGVLGIKIWI
        T YG+ G+K+WI
Subjt:  TIYGVLGIKIWI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGACAAAAAATAAATCCACTCGGTTTTAGACTTGGTGCAACCCAAGGGCATCATTCTATTTGGTTTATGAGAATATTCTCTGGTGTTGAAGGAATTGCACGTATCGA
GATTCAAAAAAGAATTGATCTTATTCAAGTGATAATCTTTATGGGATTCCCAAAGTTATTAATAGAAGATGGGTCTCGAAAAATAGAAGAATTACAGATGAATGTACAAA
AAGAATTAAATTCTGTGAACCGAAAACTCAACATTGCTATTACAAGAATAGGAAATCCTTATGGACACCCAAATATTCTTGCAGAATTTATAGCCGGACAATTAAAGAAT
AGAGTTTTTTCGCAAAGCAATGAAAAAGCTATTGAATTAACTGAACAGGCGGGTACAAAGGGAATTCAAGTACAAATTGCCGGACGTATAGATGGCAAAGAAATTGCACG
TGTAGAATGGATCAGAGAAGGAAGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTGCTATCCAGTTAGAACTATCTATGGGGTATTAGGCATAAAAATTT
GGATATTTGTAGACGAACAATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGQKINPLGFRLGATQGHHSIWFMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEDGSRKIEELQMNVQKELNSVNRKLNIAITRIGNPYGHPNILAEFIAGQLKN
RVFSQSNEKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ

Sed0004436 (gene) of Chayote v1 genome