; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004445 (gene) of Chayote v1 genome

Gene IDSed0004445
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:17092145..17092551
RNA-Seq ExpressionSed0004445
SyntenySed0004445
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054012.1 hypothetical protein E6C27_scaffold318G00660 [Cucumis melo var. makuwa]2.3e-0958.82Show/hide
Query:  TQETPGHAP-PPLTRFSAIVPPRFDRGSRAQIQITLQTIYEDESTESQNEAKMWRHHCYDRKQASSNSFSKALSCFRPLRSLKCS
        T  TP   P  PLTRFSAIVPPRF   SR QIQITL TIYE+E+     E K     C    QASS+S S ALS FRPL S+KCS
Subjt:  TQETPGHAP-PPLTRFSAIVPPRFDRGSRAQIQITLQTIYEDESTESQNEAKMWRHHCYDRKQASSNSFSKALSCFRPLRSLKCS

KAE8653296.1 hypothetical protein Csa_023338 [Cucumis sativus]8.2e-1558.25Show/hide
Query:  MSLRLIYPITQE---------TPGHAP-PPLTRFSAIVPPRFDRGSRAQIQITLQTIYEDESTESQNEAKMWRHHCYDRKQASSNSFSKALSCFRPLRSL
        MSLRLIYPI QE         TP   P  PLTRFSAI PPRF   SR  IQITL TIYE+E+     E K+    C    QA S+SFS ALSCFRPLRS+
Subjt:  MSLRLIYPITQE---------TPGHAP-PPLTRFSAIVPPRFDRGSRAQIQITLQTIYEDESTESQNEAKMWRHHCYDRKQASSNSFSKALSCFRPLRSL

Query:  KCS
        KCS
Subjt:  KCS

KAG6583881.1 hypothetical protein SDJN03_19813, partial [Cucurbita argyrosperma subsp. sororia]3.2e-1956.88Show/hide
Query:  MSLRLIYPITQETP----------------GHAPPPLTRFSAIVPPRFDRGSRAQIQITLQTIYEDESTESQNEAKMWRHHCYDRKQASSNSFSKALSCF
        MS RL+YPI+QE P                G A PPLTRFSAI PPR    SR QIQ+TLQTIYEDES +     +  R HCYDRK + S   S ALSCF
Subjt:  MSLRLIYPITQETP----------------GHAPPPLTRFSAIVPPRFDRGSRAQIQITLQTIYEDESTESQNEAKMWRHHCYDRKQASSNSFSKALSCF

Query:  RPLRSLKCS
        RPLRSLKCS
Subjt:  RPLRSLKCS

TrEMBL top hitse value%identityAlignment
A0A0A0M102 Uncharacterized protein3.5e-1158.82Show/hide
Query:  TQETPGHAP-PPLTRFSAIVPPRFDRGSRAQIQITLQTIYEDESTESQNEAKMWRHHCYDRKQASSNSFSKALSCFRPLRSLKCS
        T  TP   P  PLTRFSAI PPRF   SR  IQITL TIYE+E+     E K+    C    QA S+SFS ALSCFRPLRS+KCS
Subjt:  TQETPGHAP-PPLTRFSAIVPPRFDRGSRAQIQITLQTIYEDESTESQNEAKMWRHHCYDRKQASSNSFSKALSCFRPLRSLKCS

A0A5D3DAX8 Uncharacterized protein1.1e-0958.82Show/hide
Query:  TQETPGHAP-PPLTRFSAIVPPRFDRGSRAQIQITLQTIYEDESTESQNEAKMWRHHCYDRKQASSNSFSKALSCFRPLRSLKCS
        T  TP   P  PLTRFSAIVPPRF   SR QIQITL TIYE+E+     E K     C    QASS+S S ALS FRPL S+KCS
Subjt:  TQETPGHAP-PPLTRFSAIVPPRFDRGSRAQIQITLQTIYEDESTESQNEAKMWRHHCYDRKQASSNSFSKALSCFRPLRSLKCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTAAGGCTCATATATCCCATCACACAAGAAACTCCCGGCCACGCGCCCCCGCCGCTAACCCGATTTTCAGCCATAGTGCCGCCGCGGTTCGACCGTGGTTCGAG
AGCCCAAATTCAAATAACTCTGCAGACCATTTACGAAGATGAAAGTACTGAGAGCCAAAACGAGGCCAAAATGTGGCGCCACCATTGTTATGATCGTAAACAAGCTTCTT
CTAATTCTTTCTCCAAGGCTCTTTCCTGTTTTCGTCCTCTTCGATCGTTGAAATGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
GTTTGCAAAAGAAACCCAAAGCTTAGCTCCAATGAGTTTAAGGCTCATATATCCCATCACACAAGAAACTCCCGGCCACGCGCCCCCGCCGCTAACCCGATTTTCAGCCA
TAGTGCCGCCGCGGTTCGACCGTGGTTCGAGAGCCCAAATTCAAATAACTCTGCAGACCATTTACGAAGATGAAAGTACTGAGAGCCAAAACGAGGCCAAAATGTGGCGC
CACCATTGTTATGATCGTAAACAAGCTTCTTCTAATTCTTTCTCCAAGGCTCTTTCCTGTTTTCGTCCTCTTCGATCGTTGAAATGTTCTTAATTAAGCCCCTAATCCCA
TCTCTCTCTGTTTCTATGCCTTTAATTATACTTTAATCTCTGTTTCATCATGTAATTTTGCTTATTTTCTTTACCGC
Protein sequenceShow/hide protein sequence
MSLRLIYPITQETPGHAPPPLTRFSAIVPPRFDRGSRAQIQITLQTIYEDESTESQNEAKMWRHHCYDRKQASSNSFSKALSCFRPLRSLKCS