; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004452 (gene) of Chayote v1 genome

Gene IDSed0004452
OrganismSechium edule (Chayote v1)
DescriptionRetrotransposon protein
Genome locationLG02:44611656..44612967
RNA-Seq ExpressionSed0004452
SyntenySed0004452
Gene Ontology termsNA
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035620.1 retrotransposon protein [Cucumis melo var. makuwa]4.2e-11054.05Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC
        LHI+AHDVKNRV++R F RSGET+SRHF  VL  VIR H+ L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR N  +VP                  APYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF
         RWAILR KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T +    AD   I+++ETS  W+ +RD++A+ MF
Subjt:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF

KAA0046727.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-11054.31Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC
        LHI+AHDVKNRV++R F RSGET+SRHF  VL  VIR HD L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR N  +VP                  APYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF
         RWAILR KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T +    AD   I+++ETS  W+ +RD++A+ MF
Subjt:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF

KAA0047510.1 retrotransposon protein [Cucumis melo var. makuwa]3.5e-10953.79Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CRE+TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC
        LHI+AHDVKNRV++R F RSGET+S HF  VL  VIR H+ L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR NG +VP                  APYRG+RYHL +W G  N P   +EFFN  H SARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF
         RWAILR KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T +    AD   I+++ETS  W+ +RD +A+ MF
Subjt:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF

KAA0048361.1 retrotransposon protein [Cucumis melo var. makuwa]9.2e-11054.05Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC
        LHI+AHDVKNRV++R F RSGET+SRHF  VL  VIR H+ L KKP+P+   CTD RWKWFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEG AADSR+LRDALSR N  +VP                  APYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF
         RWAILR KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T +    AD   I+++ETS  W+ +RD++A+ MF
Subjt:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF

KAA0051057.1 retrotransposon protein [Cucumis melo var. makuwa]2.3e-10853.26Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL C ++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC
        LHI+ HDVKNRV++R F RSGET+SRHF  VL  VIR H+ L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR N  +VP                  APYRG+RYHL +WRG  N P   +EFFN  HS ARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF
         RWAILR KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T +    AD   I+++ETS  W+ +RD++A+ MF
Subjt:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF

TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein1.7e-10953.79Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CRE+TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC
        LHI+AHDVKNRV++R F RSGET+S HF  VL  VIR H+ L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR NG +VP                  APYRG+RYHL +W G  N P   +EFFN  H SARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF
         RWAILR KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T +    AD   I+++ETS  W+ +RD +A+ MF
Subjt:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF

A0A5A7TXW1 Retrotransposon protein6.9e-11154.31Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC
        LHI+AHDVKNRV++R F RSGET+SRHF  VL  VIR HD L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR N  +VP                  APYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF
         RWAILR KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T +    AD   I+++ETS  W+ +RD++A+ MF
Subjt:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF

A0A5A7U476 Retrotransposon protein4.5e-11054.05Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC
        LHI+AHDVKNRV++R F RSGET+SRHF  VL  VIR H+ L KKP+P+   CTD RWKWFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEG AADSR+LRDALSR N  +VP                  APYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF
         RWAILR KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T +    AD   I+++ETS  W+ +RD++A+ MF
Subjt:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF

A0A5A7U9H2 Retrotransposon protein1.1e-10853.26Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL C ++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC
        LHI+ HDVKNRV++R F RSGET+SRHF  VL  VIR H+ L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR N  +VP                  APYRG+RYHL +WRG  N P   +EFFN  HS ARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF
         RWAILR KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T +    AD   I+++ETS  W+ +RD++A+ MF
Subjt:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF

A0A5D3BDX0 Retrotransposon protein2.0e-11054.05Show/hide
Query:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF
        MD  +  +++      Q Q LL+  L+ N   R  +     RH  RQ+ +F MI  SDL CR++TRM+R CF  LC +LRT  GL  T+ +DVEEMVAMF
Subjt:  MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMF

Query:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC
        LHI+AHDVKNRV++R F RSGET+SRHF  VL  VIR H+ L KKP+P+   CTD RW+WFENCLGALDGT+I++ VP  +RA +R RKG + TNVL VC
Subjt:  LHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVC

Query:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK
           G+F+YVLAGWEGSAADSR+LRDALSR N  +VP                  APYRG+RYHL +WRG  N P   +EFFN  HSSARN+IERAFG LK
Subjt:  APSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH-----------------APYRGERYHLSDWRG-SNPPRNPREFFNKAHSSARNIIERAFGALK

Query:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF
         RWAILR KS+YP +VQ + I ACCLLHNLI REM +    + + E D+T +    AD   I+++ETS  W+ +RD++A+ MF
Subjt:  NRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGENDATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMF

SwissProt top hitse value%identityAlignment
B0BN95 Putative nuclease HARBI12.4e-1232.48Show/hide
Query:  LGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVL-RDALSRNNGFQVPHAPY--RGERYHLSDW--RGSNPPRNP
        +GA+D  H+ I+ P     S+ NRKG+ + N LVVC   G  + V   W GS  D  VL + +LS      +P   +      + L  W     + P  P
Subjt:  LGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVL-RDALSRNNGFQVPHAPY--RGERYHLSDW--RGSNPPRNP

Query:  REF-FNKAHSSARNIIERAFGALKNRWAIL---RHKSFYPPKVQVKIITACCLLHNL
         E+ +N+AHS+  ++IE+    L  R+  L   +    Y P+    II ACC+LHN+
Subjt:  REF-FNKAHSSARNIIERAFGALKNRWAIL---RHKSFYPPKVQVKIITACCLLHNL

Q17QR8 Putative nuclease HARBI15.4e-1232.3Show/hide
Query:  LGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHAPYRGERYHLSD-------WRGS--NP
        +G +D  H+ I+ P     S+ NRKG+ + N L+VC   G  + V   W GS  D  VL+ + S ++ F+   A    E + L D       W  +  + 
Subjt:  LGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHAPYRGERYHLSD-------WRGS--NP

Query:  PRNPREF-FNKAHSSARNIIERAFGALKNRWAIL---RHKSFYPPKVQVKIITACCLLHNL
        P  P E+ +N AHS+  ++IE+ F  L +R+  L   +    Y P+    II ACC+LHN+
Subjt:  PRNPREF-FNKAHSSARNIIERAFGALKNRWAIL---RHKSFYPPKVQVKIITACCLLHNL

Q6AZB8 Putative nuclease HARBI16.0e-1129.19Show/hide
Query:  NCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHAPYRG-----ERYHLSDWRGS--NP
        N  G +D  HI I+ P  + +S+ N+KG  + N  +VC   G  +     W GS  D  V + + +    F+       G      RY L  W  +    
Subjt:  NCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHAPYRG-----ERYHLSDWRGS--NP

Query:  PRNPREF-FNKAHSSARNIIERAFGALKNRWAIL---RHKSFYPPKVQVKIITACCLLHNL
        P +P ++ +N AH++   I++R F A++ R+  L   +    Y P+    II ACC+LHN+
Subjt:  PRNPREF-FNKAHSSARNIIERAFGALKNRWAIL---RHKSFYPPKVQVKIITACCLLHNL

Q8BR93 Putative nuclease HARBI11.3e-1031.85Show/hide
Query:  LGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVL-RDALSRNNGFQVPHAPY--RGERYHLSDW--RGSNPPRNP
        +G  D  H+ I+ P     S+ NRKG+ + N LVVC   G  + V   W GS  D  VL R +L+      +P   +      + L  W       P   
Subjt:  LGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVL-RDALSRNNGFQVPHAPY--RGERYHLSDW--RGSNPPRNP

Query:  REF-FNKAHSSARNIIERAFGALKNRWAIL---RHKSFYPPKVQVKIITACCLLHNL
         E+ +N+AHS+  ++IER    L  R+  L   +    Y P+    II ACC+LHN+
Subjt:  REF-FNKAHSSARNIIERAFGALKNRWAIL---RHKSFYPPKVQVKIITACCLLHNL

Q96MB7 Putative nuclease HARBI13.2e-1230.57Show/hide
Query:  LGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNN---GFQVPHAPYRGERYHLSDWRGS--NPPRNP
        +G +D  H+ I+ P     S+ NRKG+ + N L+VC   G  + V   W GS  D  VL+ +   +    G            + L  W  +  + P  P
Subjt:  LGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNN---GFQVPHAPYRGERYHLSDWRGS--NPPRNP

Query:  REF-FNKAHSSARNIIERAFGALKNRWAIL---RHKSFYPPKVQVKIITACCLLHNL
         E+ +N AHS+  ++IE+ F  L +R+  L   +    Y P+    II ACC+LHN+
Subjt:  REF-FNKAHSSARNIIERAFGALKNRWAIL---RHKSFYPPKVQVKIITACCLLHNL

Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein3.0e-3435.23Show/hide
Query:  IRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTV--VIRCHDI-------LYK
        ++Q   AC +  RM+  CF TLC+ML+T+  L+ T  I +EE VAMFL I  H+   R V   F R+ ETV R F+ VLT   ++ C  I       LY+
Subjt:  IRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTV--VIRCHDI-------LYK

Query:  KPEPIQPSCTDSR-WKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH------
         PE +Q    D R W +F   +GA+DGTH+ ++V  + +  + NR    + N++ +C     F Y+  G  GS  D+ VL+ A   ++ F +P       
Subjt:  KPEPIQPSCTDSR-WKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPH------

Query:  ------------APYRGE-----RYHLSDWRGSNPPRNPREFFNKAHSSARNIIERAFGALKNR
                    APYR       RYH+S +     PRN  E FN+ H+S R++IER F   KN+
Subjt:  ------------APYRGE-----RYHLSDWRGSNPPRNPREFFNKAHSSARNIIERAFGALKNR

AT4G10890.1 unknown protein1.6e-0626.76Show/hide
Query:  MLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQV
        ML    GL+  + + +EE VAMFL  +    KNR VR I       V+R+ QS+  V  +  D+L             +  K+  + L + + +H     
Subjt:  MLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQV

Query:  PVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHAPYRGERYHLSDWRGSNPPRNPREFFNKAHSSARNIIERA
                        T VL  CA +  F         S     ++        G+  PH   R   YHL  +    PP   +E FN+ H   R++I+R 
Subjt:  PVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHAPYRGERYHLSDWRGSNPPRNPREFFNKAHSSARNIIERA

Query:  FGALKNRWAILRH
        FG  K +W IL H
Subjt:  FGALKNRWAILRH

AT5G28950.1 unknown protein6.8e-1853.75Show/hide
Query:  WKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRN-NGFQVP
        + +F++C+GA+D THI   V  +   SFRNRKG I+ N+L  C    EF+YVL+GWEGSA DS+VL DAL+RN N   VP
Subjt:  WKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRN-NGFQVP

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)6.6e-2137.1Show/hide
Query:  FIYVLAGWEGSAADSRVLRDALSR----NNGFQVP---HAPYRGERYHLSDWRGS-NPPRNPREFFNKAHSSARNIIERAFGALKNRWAILRHKSFYPPK
        FIYVL+GWEGSA DSRVL DAL +    + GF       AP+RG RYHL ++ G    P  P E FN  H S RN+IER FG  K+R+AI +    +  K
Subjt:  FIYVLAGWEGSAADSRVLRDALSR----NNGFQVP---HAPYRGERYHLSDWRGS-NPPRNPREFFNKAHSSARNIIERAFGALKNRWAILRHKSFYPPK

Query:  VQVKIITACCLLHNLI---CREMGSTIGLEILGENDATLYQEEMADTPTINFV----------ETSPLWTTFRDSMAQRMFDASQN
         Q  ++  C  LHN +   CR   +    E+  E D    +    +T  I+            E + +W   R SMA+ M+  + N
Subjt:  VQVKIITACCLLHNLI---CREMGSTIGLEILGENDATLYQEEMADTPTINFV----------ETSPLWTTFRDSMAQRMFDASQN

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)7.0e-4739.54Show/hide
Query:  CRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCT-DSRWK
        C E  RM++  F  LCD+L+T G LR T+ I +E  +A+FL I+ H+++ R V+ +F  SGET+SRHF +VL  VI      +   +P   S T ++   
Subjt:  CRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKNRVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCT-DSRWK

Query:  WFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHAPYR--GERY-----HLSDWRG
        +F++C+G +D  HI + V V+ +  FRN  G++T NVL   +    F YVLAGWEGSA+D +VL  AL+R N  QVP   Y     +Y      ++ + G
Subjt:  WFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADSRVLRDALSRNNGFQVPHAPYR--GERY-----HLSDWRG

Query:  --SNPPRNPREFFNKAHSSARNIIERAFGALKNRWAILRHKSFYPPKVQVKIITACCLLHNLI
          +N     +E FN+ H      I R FGALK R+ IL     YP + QVK++ A C LHN +
Subjt:  --SNPPRNPREFFNKAHSSARNIIERAFGALKNRWAILRHKSFYPPKVQVKIITACCLLHNLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCCGATAAAACTATAGCAGTTTTAACAATACTCTACACATGGCAGAACCAGTTTCTTCTTCTTGCAAATCTTATAATGAACTACAACCCTAGGACAAAAAATTA
TTGCTCTTTCTTTAGACACCATTTTCGCCAAATGACTTTCTTCTCGATGATAAGACAAAGTGATCTAGCTTGTCGTGAGACAACTAGAATGAATCGTAGCTGCTTTGAAA
CCTTGTGCGACATGCTAAGGACCCACGGTGGTCTTCGAGGTACGGATTACATCGACGTGGAGGAAATGGTAGCCATGTTTCTACATATCATGGCTCATGATGTTAAGAAC
CGCGTCGTTCGAAGAATATTTACAAGATCCGGCGAGACAGTGTCGCGACACTTTCAATCTGTCCTTACTGTTGTGATTCGTTGTCATGACATTTTGTACAAGAAACCTGA
ACCTATCCAACCATCATGCACTGATAGTAGATGGAAGTGGTTTGAGAATTGTCTAGGTGCATTGGATGGTACTCATATAGAGATACAAGTCCCAGTTGAAAATCGTGCCT
CCTTTAGAAATAGGAAGGGTATTATCACAACAAACGTTCTTGTTGTATGCGCTCCAAGCGGAGAGTTCATATACGTACTAGCTGGGTGGGAGGGATCAGCAGCTGACTCT
AGAGTTCTTAGGGATGCTTTATCCCGTAACAATGGATTTCAAGTCCCTCATGCTCCCTATAGAGGCGAACGTTATCATCTATCGGATTGGAGGGGTAGCAATCCACCACG
GAATCCGAGAGAGTTTTTTAATAAAGCACACTCCTCGGCACGAAATATAATAGAAAGAGCATTCGGTGCATTAAAAAACCGTTGGGCTATTCTGCGGCACAAGTCTTTCT
ATCCTCCGAAAGTACAAGTGAAGATCATAACAGCTTGTTGTCTCCTACATAATTTAATATGTAGGGAGATGGGCTCTACGATTGGTTTAGAGATATTAGGGGAAAACGAT
GCCACACTCTACCAAGAGGAAATGGCGGATACCCCGACGATTAATTTCGTCGAGACATCGCCTCTTTGGACCACATTTCGAGATTCCATGGCCCAAAGAATGTTTGACGC
ATCCCAAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCCCGATAAAACTATAGCAGTTTTAACAATACTCTACACATGGCAGAACCAGTTTCTTCTTCTTGCAAATCTTATAATGAACTACAACCCTAGGACAAAAAATTA
TTGCTCTTTCTTTAGACACCATTTTCGCCAAATGACTTTCTTCTCGATGATAAGACAAAGTGATCTAGCTTGTCGTGAGACAACTAGAATGAATCGTAGCTGCTTTGAAA
CCTTGTGCGACATGCTAAGGACCCACGGTGGTCTTCGAGGTACGGATTACATCGACGTGGAGGAAATGGTAGCCATGTTTCTACATATCATGGCTCATGATGTTAAGAAC
CGCGTCGTTCGAAGAATATTTACAAGATCCGGCGAGACAGTGTCGCGACACTTTCAATCTGTCCTTACTGTTGTGATTCGTTGTCATGACATTTTGTACAAGAAACCTGA
ACCTATCCAACCATCATGCACTGATAGTAGATGGAAGTGGTTTGAGAATTGTCTAGGTGCATTGGATGGTACTCATATAGAGATACAAGTCCCAGTTGAAAATCGTGCCT
CCTTTAGAAATAGGAAGGGTATTATCACAACAAACGTTCTTGTTGTATGCGCTCCAAGCGGAGAGTTCATATACGTACTAGCTGGGTGGGAGGGATCAGCAGCTGACTCT
AGAGTTCTTAGGGATGCTTTATCCCGTAACAATGGATTTCAAGTCCCTCATGCTCCCTATAGAGGCGAACGTTATCATCTATCGGATTGGAGGGGTAGCAATCCACCACG
GAATCCGAGAGAGTTTTTTAATAAAGCACACTCCTCGGCACGAAATATAATAGAAAGAGCATTCGGTGCATTAAAAAACCGTTGGGCTATTCTGCGGCACAAGTCTTTCT
ATCCTCCGAAAGTACAAGTGAAGATCATAACAGCTTGTTGTCTCCTACATAATTTAATATGTAGGGAGATGGGCTCTACGATTGGTTTAGAGATATTAGGGGAAAACGAT
GCCACACTCTACCAAGAGGAAATGGCGGATACCCCGACGATTAATTTCGTCGAGACATCGCCTCTTTGGACCACATTTCGAGATTCCATGGCCCAAAGAATGTTTGACGC
ATCCCAAAACTAG
Protein sequenceShow/hide protein sequence
MDPDKTIAVLTILYTWQNQFLLLANLIMNYNPRTKNYCSFFRHHFRQMTFFSMIRQSDLACRETTRMNRSCFETLCDMLRTHGGLRGTDYIDVEEMVAMFLHIMAHDVKN
RVVRRIFTRSGETVSRHFQSVLTVVIRCHDILYKKPEPIQPSCTDSRWKWFENCLGALDGTHIEIQVPVENRASFRNRKGIITTNVLVVCAPSGEFIYVLAGWEGSAADS
RVLRDALSRNNGFQVPHAPYRGERYHLSDWRGSNPPRNPREFFNKAHSSARNIIERAFGALKNRWAILRHKSFYPPKVQVKIITACCLLHNLICREMGSTIGLEILGEND
ATLYQEEMADTPTINFVETSPLWTTFRDSMAQRMFDASQN