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Sed0004456 (gene) of Chayote v1 genome

Gene IDSed0004456
OrganismSechium edule (Chayote v1)
Descriptionzinc-regulated protein 8-like
Genome locationLG01:4770558..4771147
RNA-Seq ExpressionSed0004456
SyntenySed0004456
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571006.1 hypothetical protein SDJN03_29921, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2662.3Show/hide
Query:  MEQSSPL---TNSLSSNHSLEFSDIQTTPPLQSYTSLKDLLPETPSPPSS--------AWN---IKNPLVKHAALAYLQPMLTPPSTG-----RRLTRNG
        ME+SSP    ++ L S+  LEFSDI+ T PLQSYTSLKDLLP+TPSPP S        AW+   IKNPLVKHAALAYLQPMLTPP+ G     RRL ++G
Subjt:  MEQSSPL---TNSLSSNHSLEFSDIQTTPPLQSYTSLKDLLPETPSPPSS--------AWN---IKNPLVKHAALAYLQPMLTPPSTG-----RRLTRNG

Query:  FGCIEWIGAVAGDISGRGVRQW
        FGCIEW+ AV G++SG GVR+W
Subjt:  FGCIEWIGAVAGDISGRGVRQW

PQQ02572.1 uncharacterized protein Pyn_10650 [Prunus yedoensis var. nudiflora]1.5e-0951.04Show/hide
Query:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV
        +E SDI+  T    +YTSLKDLLP +P    SP  +S+W+   IKNPLVKHAALAYLQPM TPP  G     R+ R        NG GC  W+G V
Subjt:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV

PQQ14465.1 uncharacterized protein Pyn_20094 [Prunus yedoensis var. nudiflora]1.2e-0951.04Show/hide
Query:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV
        +E SDI+  T    +YTSLKDLLP +P    SP  +S+W+   IKNPLVKHAALAYLQPM TPP  G     R+ R        NG GC  W+G V
Subjt:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV

XP_011458695.1 PREDICTED: uncharacterized protein LOC105349779 [Fragaria vesca subsp. vesca]1.2e-0942.96Show/hide
Query:  MEQSSPLTNS-----LSSN---HSLEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR
        ME  +P  N+     LS N     ++FSDI+  T    +YTSL+DLLP +P    SP  +S+W+   IKNPLVKHAALAYLQPM TPP  G     R  R
Subjt:  MEQSSPLTNS-----LSSN---HSLEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR

Query:  ------NGFGCIEWIGAV----AGDISGRGVRQWE
              +G GC++W+  V      +  G G R WE
Subjt:  ------NGFGCIEWIGAV----AGDISGRGVRQWE

XP_021810412.1 uncharacterized protein LOC110753763 [Prunus avium]1.2e-0951.04Show/hide
Query:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV
        +E SDI+  T    +YTSLKDLLP +P    SP  +S+W+   IKNPLVKHAALAYLQPM TPP  G     R+ R        NG GC  W+G V
Subjt:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV

TrEMBL top hitse value%identityAlignment
A0A0A0LPR9 Uncharacterized protein2.1e-2059.05Show/hide
Query:  TNSLSSNH-----SLEFSDIQTTPPLQSYTSLKDLLPETPSPPSSAWN-------IKNPLVKHAALAYLQPMLTPPSTG-----RRLTRNGFGCIEWIGA
        T+ LS NH      LEFSD     PLQSYTSLKDLLP++PSPP SA +       IKNPLVKHAALAYLQPMLTPP+T      R L ++GFGCIEW+ A
Subjt:  TNSLSSNH-----SLEFSDIQTTPPLQSYTSLKDLLPETPSPPSSAWN-------IKNPLVKHAALAYLQPMLTPPSTG-----RRLTRNGFGCIEWIGA

Query:  VAGDI
        V  ++
Subjt:  VAGDI

A0A314Y647 Uncharacterized protein7.3e-1051.04Show/hide
Query:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV
        +E SDI+  T    +YTSLKDLLP +P    SP  +S+W+   IKNPLVKHAALAYLQPM TPP  G     R+ R        NG GC  W+G V
Subjt:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV

A0A314Z2H1 Uncharacterized protein5.6e-1051.04Show/hide
Query:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV
        +E SDI+  T    +YTSLKDLLP +P    SP  +S+W+   IKNPLVKHAALAYLQPM TPP  G     R+ R        NG GC  W+G V
Subjt:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV

A0A6J5YBF2 Uncharacterized protein1.3e-0950Show/hide
Query:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SP-PSSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV
        +E SDI+  T    +YTSL+DLLP +P    SP  +S+W+   IKNPLVKHAALAYLQPM TPP  G     R+ R        NG GC  W+G V
Subjt:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SP-PSSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV

A0A6P5S7A4 uncharacterized protein LOC1107537635.6e-1051.04Show/hide
Query:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV
        +E SDI+  T    +YTSLKDLLP +P    SP  +S+W+   IKNPLVKHAALAYLQPM TPP  G     R+ R        NG GC  W+G V
Subjt:  LEFSDIQ-TTPPLQSYTSLKDLLPETP----SPP-SSAWN---IKNPLVKHAALAYLQPMLTPPSTG----RRLTR--------NGFGCIEWIGAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAATCTTCCCCTCTCACCAATTCCCTCTCTTCCAATCACTCCCTCGAATTCTCCGATATCCAAACAACCCCCCCTCTTCAATCCTACACCAGCCTTAAGGATCT
CCTGCCGGAAACCCCCTCGCCGCCGTCCTCCGCCTGGAATATCAAAAACCCACTTGTCAAACACGCCGCCTTGGCTTACCTTCAGCCCATGCTCACGCCGCCGTCCACCG
GGCGGAGGCTTACGAGAAACGGGTTTGGATGCATTGAGTGGATCGGTGCCGTCGCCGGAGATATCTCCGGCCGTGGAGTCCGGCAGTGGGAGTGA
mRNA sequenceShow/hide mRNA sequence
CAGCAAACCAAAATCTCTCTCCAAATCTTCAGATTCTATTCTCAATTTCATGGAACAATCTTCCCCTCTCACCAATTCCCTCTCTTCCAATCACTCCCTCGAATTCTCCG
ATATCCAAACAACCCCCCCTCTTCAATCCTACACCAGCCTTAAGGATCTCCTGCCGGAAACCCCCTCGCCGCCGTCCTCCGCCTGGAATATCAAAAACCCACTTGTCAAA
CACGCCGCCTTGGCTTACCTTCAGCCCATGCTCACGCCGCCGTCCACCGGGCGGAGGCTTACGAGAAACGGGTTTGGATGCATTGAGTGGATCGGTGCCGTCGCCGGAGA
TATCTCCGGCCGTGGAGTCCGGCAGTGGGAGTGATTGGAGAGGTGCTATTTCGATGAAGCTCCGCCAGTTGACTGCCGGATAGGAACAAAAACACTTGACCGATACTTTT
TTATTATTATTATTATTAAAAATATTTATGTAATTGTCCCTTTATTTTTCAGTGGGGATGATGTGTAATTACGAATGAGATTGTTCGAATTATTATAATTATAATAGGAT
GATTTGTGGATGTACATGATTGGTTTGAAATTAGTGAATG
Protein sequenceShow/hide protein sequence
MEQSSPLTNSLSSNHSLEFSDIQTTPPLQSYTSLKDLLPETPSPPSSAWNIKNPLVKHAALAYLQPMLTPPSTGRRLTRNGFGCIEWIGAVAGDISGRGVRQWE