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Sed0004500 (gene) of Chayote v1 genome

Gene IDSed0004500
OrganismSechium edule (Chayote v1)
Descriptioncytochrome b5
Genome locationLG04:36654184..36658312
RNA-Seq ExpressionSed0004500
SyntenySed0004500
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001199 - Cytochrome b5-like heme/steroid binding domain
IPR018506 - Cytochrome b5, heme-binding site
IPR036400 - Cytochrome b5-like heme/steroid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140502.1 cytochrome b5 [Cucumis sativus]1.6e-5381.4Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT
        MDS+SKVY FDEV+KHN  KDCWLIISGYVYDVTSFLPDHPGGDELLLL+V KDATFDFKSVGHSE A E+MK Y  GKIDMSTLP  Q YVE+APYQ+T
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT

Query:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL
        P+LFSFSP+HLL+P+LL A AFAFPYFKL
Subjt:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL

XP_008459741.1 PREDICTED: cytochrome b5 [Cucumis melo]2.1e-5380.62Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT
        MDS+SKVY FDEV+KHNH KDCWLIISGYVYDVTSFLPDHPGGDELLLL+V KDATFDFKSVGHSE A+E+MK Y  GKIDMSTLP  Q YVE+ PYQ T
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT

Query:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL
        P+LFSFSP+H+L+P+LL A AFAFPYFKL
Subjt:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL

XP_022964486.1 cytochrome b5-like [Cucurbita moschata]7.1e-4975.97Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT
        MDS+SKVY FDEV+KHNH KDCWLIISG+VYDVTS+LPDHPGG ELL+L+V KDATFDFKSVGHSESA+ERMKKY  GKID  TLP  Q +VET P++ T
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT

Query:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL
        P+L SFSPLH+LIPLLL   AFAFPY K+
Subjt:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL

XP_023000205.1 cytochrome b5-like [Cucurbita maxima]9.2e-4975.19Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT
        MDS+SK+Y F+EV+KHNH KDCWLIISGYVYDVTS+LPDHPGG ELL+L+V KDATFDFKSVGHSE+A E MKKY  GKID  TLP  Q YVET PY+ T
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT

Query:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL
        P+L SFSPLH+LIPLLL   AFAFPY K+
Subjt:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL

XP_038875836.1 cytochrome b5-like [Benincasa hispida]6.0e-5682.95Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT
        MDSSSK+Y FDEVSKHNHH+DCWLIISGYVYDVT+FLPDHPGG+ELLLL+VG+DATFDFKSVGHSE A+E+MKKY  GKIDMSTLP  Q YVET PYQ T
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT

Query:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL
        P+LFSFSP+HLLIP+LL A AFAFPYFKL
Subjt:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL

TrEMBL top hitse value%identityAlignment
A0A0A0KA20 Cytochrome b5 heme-binding domain-containing protein7.9e-5481.4Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT
        MDS+SKVY FDEV+KHN  KDCWLIISGYVYDVTSFLPDHPGGDELLLL+V KDATFDFKSVGHSE A E+MK Y  GKIDMSTLP  Q YVE+APYQ+T
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT

Query:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL
        P+LFSFSP+HLL+P+LL A AFAFPYFKL
Subjt:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL

A0A1S3CAE5 cytochrome b51.0e-5380.62Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT
        MDS+SKVY FDEV+KHNH KDCWLIISGYVYDVTSFLPDHPGGDELLLL+V KDATFDFKSVGHSE A+E+MK Y  GKIDMSTLP  Q YVE+ PYQ T
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT

Query:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL
        P+LFSFSP+H+L+P+LL A AFAFPYFKL
Subjt:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL

A0A6J1HJ10 cytochrome b5-like3.4e-4975.97Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT
        MDS+SKVY FDEV+KHNH KDCWLIISG+VYDVTS+LPDHPGG ELL+L+V KDATFDFKSVGHSESA+ERMKKY  GKID  TLP  Q +VET P++ T
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT

Query:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL
        P+L SFSPLH+LIPLLL   AFAFPY K+
Subjt:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL

A0A6J1KHQ2 cytochrome b5-like4.5e-4975.19Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT
        MDS+SK+Y F+EV+KHNH KDCWLIISGYVYDVTS+LPDHPGG ELL+L+V KDATFDFKSVGHSE+A E MKKY  GKID  TLP  Q YVET PY+ T
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKT

Query:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL
        P+L SFSPLH+LIPLLL   AFAFPY K+
Subjt:  PALFSFSPLHLLIPLLLFAFAFAFPYFKL

M5X125 Cytochrome b5 heme-binding domain-containing protein2.5e-3156.15Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAY---VETAPY
        M S S+VY FDEV+KHNH KDCW+IISG VYDVT FL DHPGGDE+LLL+V KDAT DF  VGHS+SA+E+M+K+  GK+D ST+P   +Y    +T P 
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAY---VETAPY

Query:  QKTPALFSFSPLHLLIPLLLFAFAFAFPYF
            + F    L  L+PLL+   AFA  Y+
Subjt:  QKTPALFSFSPLHLLIPLLLFAFAFAFPYF

SwissProt top hitse value%identityAlignment
O48845 Cytochrome b5 isoform B5.7e-2546.77Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-ETAPY--
        M   +K++   EVS+HN   DCW++I+G VY+VT FL DHPGGD++LL S GKDAT DF+ VGHSESA E M++Y  G+ID +T+P    Y     P+  
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-ETAPY--

Query:  QKTPALFSFSPLHLLIPLLLFAFA
        Q   + F    L  L+PL +   A
Subjt:  QKTPALFSFSPLHLLIPLLLFAFA

P40934 Cytochrome b59.0e-3155.91Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQ--
        M S  KV GF+EVS+HN  KDCWLIISG VYDVT F+ DHPGGDE+LL S GKDAT DF+ VGHS++A + M+KY  G+ID ST+P  + YV  AP Q  
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQ--

Query:  ----KTPALFSFSPLHLLIPLLLFAFA
            KTP  F    L  L+P+L+   A
Subjt:  ----KTPALFSFSPLHLLIPLLLFAFA

P49098 Cytochrome b51.1e-2546.92Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-ETAPY--
        M   +KV+   EVS+HN+ KDCWL+ISG VYDVT FL DHPGGDE+LL + GKDAT DF+ VGHS SA   + +Y  G ID +T+P    Y     P+  
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-ETAPY--

Query:  QKTPALFSFSPLHLLIPLLLFAFAFAFPYF
        Q   + F    L  L+PL++   AF   ++
Subjt:  QKTPALFSFSPLHLLIPLLLFAFAFAFPYF

P49100 Cytochrome b55.7e-2548.41Show/hide
Query:  DSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAP----Y
        + + KVY  +EV+KHN   DCWLII G VY+V+ FL DHPGGD++LL S GKDAT DF+ VGHS +A   M +Y  G ID ST+P    YV         
Subjt:  DSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAP----Y

Query:  QKTPALFSFSPLHLLIPLLLFAFAFA
         KTP  F    L  L+PL +   A A
Subjt:  QKTPALFSFSPLHLLIPLLLFAFAFA

Q42342 Cytochrome b5 isoform E2.2e-2952.63Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQ--
        M S  KV  F+EVSKHN  KDCWLIISG VYDVT F+ DHPGGDE+LL S GKDAT DF+ VGHS++A + M KY  G+ID S++P  + YV  AP Q  
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQ--

Query:  ----KTPALFSFSPLHLLIPLLLFAFAFAFPYF
            KTP  F    L  L+P+L+   A    ++
Subjt:  ----KTPALFSFSPLHLLIPLLLFAFAFAFPYF

Arabidopsis top hitse value%identityAlignment
AT1G26340.1 cytochrome B5 isoform A2.4e-2338.89Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTL---PGNQAYVETAPY
        M + +K+Y  +E + HN   DCW++I G VYDV+S++ +HPGGD++LL   GKDAT DF+  GHS+ A E M+KY  G++D S+L   P  + Y +  P 
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTL---PGNQAYVETAPY

Query:  QKTPALFSFSPLHLLIPLLLFAFAFA
             LF  +  + ++P+ +   + A
Subjt:  QKTPALFSFSPLHLLIPLLLFAFAFA

AT2G32720.1 cytochrome B5 isoform B4.0e-2646.77Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-ETAPY--
        M   +K++   EVS+HN   DCW++I+G VY+VT FL DHPGGD++LL S GKDAT DF+ VGHSESA E M++Y  G+ID +T+P    Y     P+  
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-ETAPY--

Query:  QKTPALFSFSPLHLLIPLLLFAFA
        Q   + F    L  L+PL +   A
Subjt:  QKTPALFSFSPLHLLIPLLLFAFA

AT2G46650.1 cytochrome B5 isoform C7.6e-2542.19Show/hide
Query:  SKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-----ETAPYQK
        + +  F +V+KH    DCW++I G VYD+++F+ +HPGGD +LL   GKDA+ DF+ V HS+ A+E MKKYC G +D ST+P  Q Y+     E+   + 
Subjt:  SKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-----ETAPYQK

Query:  TPALFSFSPLHLLIPLLLFAFAFAFPYF
        T        L  LIPLL+   AFA  ++
Subjt:  TPALFSFSPLHLLIPLLLFAFAFAFPYF

AT5G48810.1 cytochrome B5 isoform D5.3e-2643.94Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-----ETA
        M    KV+   EVS+H+  KDCW++I G VYDVT FL DHPGGDE++L S GKDAT DF+ VGHS +A+  + +Y  G ID +T+P    +V     +  
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYV-----ETA

Query:  PYQKTPALFSFSPLHLLIPLLLFAFAFAFPYF
          Q   + F    L  L+PLL+   AF   Y+
Subjt:  PYQKTPALFSFSPLHLLIPLLLFAFAFAFPYF

AT5G53560.1 cytochrome B5 isoform E1.6e-3052.63Show/hide
Query:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQ--
        M S  KV  F+EVSKHN  KDCWLIISG VYDVT F+ DHPGGDE+LL S GKDAT DF+ VGHS++A + M KY  G+ID S++P  + YV  AP Q  
Subjt:  MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQ--

Query:  ----KTPALFSFSPLHLLIPLLLFAFAFAFPYF
            KTP  F    L  L+P+L+   A    ++
Subjt:  ----KTPALFSFSPLHLLIPLLLFAFAFAFPYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCGAGTTCAAAAGTGTATGGTTTCGATGAAGTTTCAAAGCACAATCACCACAAAGACTGCTGGCTTATCATTTCTGGATATGTGTACGACGTGACTTCTTTTTT
ACCTGACCATCCAGGTGGCGATGAACTTTTGCTACTCTCTGTCGGAAAAGATGCAACGTTTGACTTTAAAAGTGTCGGACACAGTGAATCAGCTGAAGAGAGGATGAAAA
AGTATTGCAAAGGTAAGATCGACATGTCGACTCTCCCAGGAAACCAAGCTTATGTCGAAACAGCTCCATACCAAAAGACTCCTGCTCTGTTTTCCTTTTCCCCCTTGCAT
CTCCTAATCCCCCTTTTGCTCTTCGCCTTTGCTTTTGCATTTCCTTACTTTAAACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCGAGTTCAAAAGTGTATGGTTTCGATGAAGTTTCAAAGCACAATCACCACAAAGACTGCTGGCTTATCATTTCTGGATATGTGTACGACGTGACTTCTTTTTT
ACCTGACCATCCAGGTGGCGATGAACTTTTGCTACTCTCTGTCGGAAAAGATGCAACGTTTGACTTTAAAAGTGTCGGACACAGTGAATCAGCTGAAGAGAGGATGAAAA
AGTATTGCAAAGGTAAGATCGACATGTCGACTCTCCCAGGAAACCAAGCTTATGTCGAAACAGCTCCATACCAAAAGACTCCTGCTCTGTTTTCCTTTTCCCCCTTGCAT
CTCCTAATCCCCCTTTTGCTCTTCGCCTTTGCTTTTGCATTTCCTTACTTTAAACTTTAA
Protein sequenceShow/hide protein sequence
MDSSSKVYGFDEVSKHNHHKDCWLIISGYVYDVTSFLPDHPGGDELLLLSVGKDATFDFKSVGHSESAEERMKKYCKGKIDMSTLPGNQAYVETAPYQKTPALFSFSPLH
LLIPLLLFAFAFAFPYFKL