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Sed0004502 (gene) of Chayote v1 genome

Gene IDSed0004502
OrganismSechium edule (Chayote v1)
DescriptionAnkyrin repeat protein
Genome locationLG09:36780089..36782974
RNA-Seq ExpressionSed0004502
SyntenySed0004502
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048674.1 Ankyrin repeat protein [Cucumis melo var. makuwa]2.9e-2344.02Show/hide
Query:  MTMTRDFKLFQTLFLVFAWQY-CSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFGF
        M MTR FKLFQTL LVFAW+Y C++  ATF D TGV + G+NHQFSF +FG  HIG  NV  ++ S V  +   +AP GIAPVGL+T   K  K  S+  
Subjt:  MTMTRDFKLFQTLFLVFAWQY-CSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFGF

Query:  EIPK-IKSGIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGNFIKKASSKEKKHGKMSSHFRVFNFKRYLMYIKLRNMHVS
        +I K IK G   S+  E NL +G  ++  SHG   G  +++S+G+     SS  K +G+MS+     N K     +K++  HV+
Subjt:  EIPK-IKSGIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGNFIKKASSKEKKHGKMSSHFRVFNFKRYLMYIKLRNMHVS

KAA0048677.1 Ankyrin repeat protein [Cucumis melo var. makuwa]8.6e-2047.53Show/hide
Query:  MTMTR-DFKLFQTLFLVFAWQY-CSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFG
        M M R  FKLFQTL LVFAW+Y C++  ATF+D TGV + G+NHQFSF +FG  HIG  NV  S+ S V  +   +AP GIAPVGLETP  K  K  S  
Subjt:  MTMTR-DFKLFQTLFLVFAWQY-CSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFG

Query:  FEIPK-IKSGIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGNFIKKASSKEKKHGKMS
        F+I K IK G   S+  E  L SG  ++  S+  K  +K+  S        SS  K +G MS
Subjt:  FEIPK-IKSGIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGNFIKKASSKEKKHGKMS

KAE8646351.1 hypothetical protein Csa_023818, partial [Cucumis sativus]1.5e-1655.86Show/hide
Query:  ATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFGFEIPK-IKSGIVFSHGGEINLKSGRGDL
        ATFNDVTGV +L +NH FSF  FG   IG  N   S+AS V+  +  +AP GIAPVGL+TP  K  K  +FG EI K I+SG+V S   EINLKSG G++
Subjt:  ATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFGFEIPK-IKSGIVFSHGGEINLKSGRGDL

Query:  VLSHGYKHGLK
         LSHG K  LK
Subjt:  VLSHGYKHGLK

KAE8646352.1 hypothetical protein Csa_015951, partial [Cucumis sativus]1.6e-2143.72Show/hide
Query:  MTMTRDFKLFQTLFLVFAWQY-CSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFGF
        M M R F LFQTL LVFAW+Y C++  ATF+D TGV + G+NHQFSF +FG  HIG  NV  S+ S V+ +   +AP GIAPVGLET   K  K  S+  
Subjt:  MTMTRDFKLFQTLFLVFAWQY-CSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFGF

Query:  EIPK-IK-SGIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGNFIKKASSKEKKHGKMSSHFRVFNFKRYLMYIKLRNMH
        +I K IK  G V SH  E NL SG  ++  SHG   G  +++S+G+ +  +S  E    K   H    N+K     ++++  H
Subjt:  EIPK-IK-SGIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGNFIKKASSKEKKHGKMSSHFRVFNFKRYLMYIKLRNMH

TYK18187.1 Ankyrin repeat protein [Cucumis melo var. makuwa]2.4e-1440.62Show/hide
Query:  MTMTRDFKLFQTLFLVFAWQYCSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILN--VGDSVASNVDMESSTKAP--GIAPVGLETPKRKYTKDLSF
        M  T+ FKLF TLFL+F+WQ C K  ATF+DVTG+  LGINH++SF +FG   +G+ +  VG   +S VD+ES  +AP   I P G   P+       S 
Subjt:  MTMTRDFKLFQTLFLVFAWQYCSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILN--VGDSVASNVDMESSTKAP--GIAPVGLETPKRKYTKDLSF

Query:  GFEIPKIKS--------------GIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGN
         FE    K               G V S GG+I +KS     V      HGL+T  SR N
Subjt:  GFEIPKIKS--------------GIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGN

TrEMBL top hitse value%identityAlignment
A0A0A0K5J0 Uncharacterized protein4.2e-2859.26Show/hide
Query:  MTRDFKLFQTLFLVFAWQYCSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFGFEIP
        M R FKLFQTLFLVFAWQ+C K  ATFNDVTGV +L +NH FSF  FG   IG  N   S+AS V+  +  +AP GIAPVGL+TP  K  K  +FG EI 
Subjt:  MTRDFKLFQTLFLVFAWQYCSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFGFEIP

Query:  K-IKSGIVFSHGGEINLKSGRGDLVLSHGYKHGLK
        K I+SG+V S   EINLKSG G++ LSHG K  LK
Subjt:  K-IKSGIVFSHGGEINLKSGRGDLVLSHGYKHGLK

A0A0A0K7W7 Uncharacterized protein1.3e-2143.72Show/hide
Query:  MTMTRDFKLFQTLFLVFAWQY-CSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFGF
        M M R FKLFQTL LVFAW+Y C++  ATF+D TGV + G+NHQFSF +FG  HIG  +V  S+ S V  +   +AP GIAPVGLET   K  K  S+  
Subjt:  MTMTRDFKLFQTLFLVFAWQY-CSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFGF

Query:  EIPK-IK-SGIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGNFIKKASSKEKKHGKMSSHFRVFNFKRYLMYIKLRNMH
        +I K IK  G V SH  E NL SG  ++  SHG   G  +++S+G+ +  +S  E    K   H    N+K     ++++  H
Subjt:  EIPK-IK-SGIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGNFIKKASSKEKKHGKMSSHFRVFNFKRYLMYIKLRNMH

A0A5A7U057 Ankyrin repeat protein1.4e-2344.02Show/hide
Query:  MTMTRDFKLFQTLFLVFAWQY-CSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFGF
        M MTR FKLFQTL LVFAW+Y C++  ATF D TGV + G+NHQFSF +FG  HIG  NV  ++ S V  +   +AP GIAPVGL+T   K  K  S+  
Subjt:  MTMTRDFKLFQTLFLVFAWQY-CSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFGF

Query:  EIPK-IKSGIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGNFIKKASSKEKKHGKMSSHFRVFNFKRYLMYIKLRNMHVS
        +I K IK G   S+  E NL +G  ++  SHG   G  +++S+G+     SS  K +G+MS+     N K     +K++  HV+
Subjt:  EIPK-IKSGIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGNFIKKASSKEKKHGKMSSHFRVFNFKRYLMYIKLRNMHVS

A0A5A7U318 Ankyrin repeat protein4.2e-2047.53Show/hide
Query:  MTMTR-DFKLFQTLFLVFAWQY-CSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFG
        M M R  FKLFQTL LVFAW+Y C++  ATF+D TGV + G+NHQFSF +FG  HIG  NV  S+ S V  +   +AP GIAPVGLETP  K  K  S  
Subjt:  MTMTR-DFKLFQTLFLVFAWQY-CSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAP-GIAPVGLETPKRKYTKDLSFG

Query:  FEIPK-IKSGIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGNFIKKASSKEKKHGKMS
        F+I K IK G   S+  E  L SG  ++  S+  K  +K+  S        SS  K +G MS
Subjt:  FEIPK-IKSGIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGNFIKKASSKEKKHGKMS

A0A5D3D2N3 Ankyrin repeat protein1.2e-1440.62Show/hide
Query:  MTMTRDFKLFQTLFLVFAWQYCSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILN--VGDSVASNVDMESSTKAP--GIAPVGLETPKRKYTKDLSF
        M  T+ FKLF TLFL+F+WQ C K  ATF+DVTG+  LGINH++SF +FG   +G+ +  VG   +S VD+ES  +AP   I P G   P+       S 
Subjt:  MTMTRDFKLFQTLFLVFAWQYCSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILN--VGDSVASNVDMESSTKAP--GIAPVGLETPKRKYTKDLSF

Query:  GFEIPKIKS--------------GIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGN
         FE    K               G V S GG+I +KS     V      HGL+T  SR N
Subjt:  GFEIPKIKS--------------GIVFSHGGEINLKSGRGDLVLSHGYKHGLKTIESRGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATGACAAGAGATTTTAAGCTCTTCCAAACCCTTTTCTTAGTGTTTGCTTGGCAATATTGTTCAAAGGCGAGTGCCACCTTCAACGACGTCACCGGAGTCTTCGA
TCTCGGAATCAATCATCAATTTTCCTTTCTTTCATTTGGACCACATCATATTGGGATTCTTAACGTCGGCGATAGTGTCGCATCGAATGTAGACATGGAGAGTTCTACAA
AAGCACCAGGGATTGCTCCTGTTGGGCTTGAAACTCCAAAGAGAAAATACACTAAAGACTTGTCTTTTGGTTTTGAAATTCCTAAGATCAAGAGTGGCATTGTTTTTTCT
CATGGTGGAGAAATTAATTTGAAAAGTGGTAGAGGCGACCTTGTTCTTTCTCATGGTTACAAACATGGTCTGAAAACTATTGAGAGCCGTGGCAATTTTATAAAAAAAGC
GTCAAGTAAAGAGAAAAAACATGGGAAAATGTCTTCACATTTCCGTGTTTTTAATTTTAAACGATATTTGATGTATATAAAGCTTCGTAACATGCACGTAAGTTATGTTT
TCACTTGGAATATGTTGTCTATTCATTTTGGATGTTTTATTCTTTTCTTTTTACATATGTTAAGTATTTATGTAGGACACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAATGACAAGAGATTTTAAGCTCTTCCAAACCCTTTTCTTAGTGTTTGCTTGGCAATATTGTTCAAAGGCGAGTGCCACCTTCAACGACGTCACCGGAGTCTTCGA
TCTCGGAATCAATCATCAATTTTCCTTTCTTTCATTTGGACCACATCATATTGGGATTCTTAACGTCGGCGATAGTGTCGCATCGAATGTAGACATGGAGAGTTCTACAA
AAGCACCAGGGATTGCTCCTGTTGGGCTTGAAACTCCAAAGAGAAAATACACTAAAGACTTGTCTTTTGGTTTTGAAATTCCTAAGATCAAGAGTGGCATTGTTTTTTCT
CATGGTGGAGAAATTAATTTGAAAAGTGGTAGAGGCGACCTTGTTCTTTCTCATGGTTACAAACATGGTCTGAAAACTATTGAGAGCCGTGGCAATTTTATAAAAAAAGC
GTCAAGTAAAGAGAAAAAACATGGGAAAATGTCTTCACATTTCCGTGTTTTTAATTTTAAACGATATTTGATGTATATAAAGCTTCGTAACATGCACGTAAGTTATGTTT
TCACTTGGAATATGTTGTCTATTCATTTTGGATGTTTTATTCTTTTCTTTTTACATATGTTAAGTATTTATGTAGGACACTTGTAA
Protein sequenceShow/hide protein sequence
MTMTRDFKLFQTLFLVFAWQYCSKASATFNDVTGVFDLGINHQFSFLSFGPHHIGILNVGDSVASNVDMESSTKAPGIAPVGLETPKRKYTKDLSFGFEIPKIKSGIVFS
HGGEINLKSGRGDLVLSHGYKHGLKTIESRGNFIKKASSKEKKHGKMSSHFRVFNFKRYLMYIKLRNMHVSYVFTWNMLSIHFGCFILFFLHMLSIYVGHL