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Sed0004564 (gene) of Chayote v1 genome

Gene IDSed0004564
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:33033763..33034543
RNA-Seq ExpressionSed0004564
SyntenySed0004564
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035098.1 uncharacterized protein E6C27_scaffold57G001730 [Cucumis melo var. makuwa]2.1e-2863.16Show/hide
Query:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRK---DLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFL
        M+KGL IL L S+L LYLLPFCL ETNFT KADDH K+LK  RPRK   DLQGSE+++ GAAV    R +  YG   D+HHGRSKNDAN+LRIKS SS +
Subjt:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRK---DLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFL

Query:  WKVSCGIFCFCVLL
        WKVS G   FC+++
Subjt:  WKVSCGIFCFCVLL

KAG7023439.1 hypothetical protein SDJN02_14464, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2868.14Show/hide
Query:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV
        MRKG F+ LLISLL L LLPFCLSE  FT KA D YK LK  RPRKDLQ S+Q+NVGAA  +  R R  YG G D+H G SKNDAN LRIKSTSS LW V
Subjt:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV

Query:  SCGIFCFCVLLAG
        SCG F  CVLL G
Subjt:  SCGIFCFCVLLAG

KGN65174.1 hypothetical protein Csa_019558 [Cucumis sativus]1.6e-2860.53Show/hide
Query:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV
        M+KGL +L L S++ LYLLPFCL ETNFT KADDH K+LK  RPRKD+Q SE+++ GA+VA   R +  YG   D+HHG SKNDAN+L IKS SS +WKV
Subjt:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV

Query:  SCGIFCFCVLLAGF
        S G   FCV++ GF
Subjt:  SCGIFCFCVLLAGF

XP_022921746.1 uncharacterized protein LOC111429900 [Cucurbita moschata]1.9e-2969.03Show/hide
Query:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV
        MRKG F+LLLISLL L LLPFCLSE +FT KA D YK LK  RPRKDLQ S+Q+NVGAA  +  R R  YG G D+H G SKNDAN LRIKSTSS LW V
Subjt:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV

Query:  SCGIFCFCVLLAG
        SCG F  CVLL G
Subjt:  SCGIFCFCVLLAG

XP_022988599.1 uncharacterized protein LOC111485797 [Cucurbita maxima]2.9e-3070.8Show/hide
Query:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV
        MRKG F+LLLISLL L LLPFCLSE  FT KA D YK LK  RPRKDLQ SEQ+NVGAA  R  R R  YG G D+H G SKNDAN LRIKSTSS LW+V
Subjt:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV

Query:  SCGIFCFCVLLAG
        SCG F  CVLL G
Subjt:  SCGIFCFCVLLAG

TrEMBL top hitse value%identityAlignment
A0A0A0LW17 Uncharacterized protein7.7e-2960.53Show/hide
Query:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV
        M+KGL +L L S++ LYLLPFCL ETNFT KADDH K+LK  RPRKD+Q SE+++ GA+VA   R +  YG   D+HHG SKNDAN+L IKS SS +WKV
Subjt:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV

Query:  SCGIFCFCVLLAGF
        S G   FCV++ GF
Subjt:  SCGIFCFCVLLAGF

A0A5A7SWW6 Uncharacterized protein1.0e-2863.16Show/hide
Query:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRK---DLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFL
        M+KGL IL L S+L LYLLPFCL ETNFT KADDH K+LK  RPRK   DLQGSE+++ GAAV    R +  YG   D+HHGRSKNDAN+LRIKS SS +
Subjt:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRK---DLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFL

Query:  WKVSCGIFCFCVLL
        WKVS G   FC+++
Subjt:  WKVSCGIFCFCVLL

A0A6J1C4Y5 uncharacterized protein LOC1110074325.0e-1252.83Show/hide
Query:  GLFILLLISL-LSLYLLPFCLS-ETNFTIKADDHYK-KLKHERPRKDLQG----SEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSF
        GL ILLLIS+ LS   LP C S ETNFTIK +D YK +LK  RP KDL+G    SE+   GA   +  R R  YG   D+  G SKNDA +LRIKS  S 
Subjt:  GLFILLLISL-LSLYLLPFCLS-ETNFTIKADDHYK-KLKHERPRKDLQG----SEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSF

Query:  LWKVSC
         W+V C
Subjt:  LWKVSC

A0A6J1E284 uncharacterized protein LOC1114299009.2e-3069.03Show/hide
Query:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV
        MRKG F+LLLISLL L LLPFCLSE +FT KA D YK LK  RPRKDLQ S+Q+NVGAA  +  R R  YG G D+H G SKNDAN LRIKSTSS LW V
Subjt:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV

Query:  SCGIFCFCVLLAG
        SCG F  CVLL G
Subjt:  SCGIFCFCVLLAG

A0A6J1JM10 uncharacterized protein LOC1114857971.4e-3070.8Show/hide
Query:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV
        MRKG F+LLLISLL L LLPFCLSE  FT KA D YK LK  RPRKDLQ SEQ+NVGAA  R  R R  YG G D+H G SKNDAN LRIKSTSS LW+V
Subjt:  MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKV

Query:  SCGIFCFCVLLAG
        SCG F  CVLL G
Subjt:  SCGIFCFCVLLAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAAGGACTATTCATTTTGCTCCTCATTTCCCTTCTTTCCCTTTATCTCCTTCCATTTTGTTTGTCTGAAACCAATTTCACCATTAAAGCTGATGATCATTACAA
GAAGCTGAAGCATGAGAGGCCCAGAAAAGATTTACAGGGCAGTGAACAGATGAATGTCGGAGCTGCGGTGGCGAGGACTGGAAGAACAAGAGAAAATTATGGGGCCGGGA
AAGACGTTCACCACGGACGTTCGAAGAATGATGCTAACGCCTTACGGATTAAATCGACTTCTTCATTTCTGTGGAAAGTTTCATGTGGTATCTTTTGTTTCTGTGTTCTT
CTTGCTGGTTTTTAA
mRNA sequenceShow/hide mRNA sequence
AATACACCACTTTATAAGGGCTATTGTTGTTTCTTTTGAGTGATTTAAAGAGGCAGTCTCAGAAAAATTGCTCATAGAATACTGAATTCAATCCACATGAGGAAAGGACT
ATTCATTTTGCTCCTCATTTCCCTTCTTTCCCTTTATCTCCTTCCATTTTGTTTGTCTGAAACCAATTTCACCATTAAAGCTGATGATCATTACAAGAAGCTGAAGCATG
AGAGGCCCAGAAAAGATTTACAGGGCAGTGAACAGATGAATGTCGGAGCTGCGGTGGCGAGGACTGGAAGAACAAGAGAAAATTATGGGGCCGGGAAAGACGTTCACCAC
GGACGTTCGAAGAATGATGCTAACGCCTTACGGATTAAATCGACTTCTTCATTTCTGTGGAAAGTTTCATGTGGTATCTTTTGTTTCTGTGTTCTTCTTGCTGGTTTTTA
AGTGGCGGCTCTGGTGTAGTAGAGCAGTAAGTGTTATTTTGTATAATGTTTGGACTTTTATTTAGTACAAGAACAATATTTGGAGATTGAGATTCGAACATGTCACCTCT
AAGTCGAACATAAATTTCAATTACCACTCAGATAAAATAGCTTTGGCTATAATGTTTGGACCTTGTGTTTTGGCCAATGTTAGTATTGGATAACTTTGGCTTTGAAGTTT
CCTAATAGCATAATATTCTCTATATTGTTTTTCTTTGTA
Protein sequenceShow/hide protein sequence
MRKGLFILLLISLLSLYLLPFCLSETNFTIKADDHYKKLKHERPRKDLQGSEQMNVGAAVARTGRTRENYGAGKDVHHGRSKNDANALRIKSTSSFLWKVSCGIFCFCVL
LAGF