; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004578 (gene) of Chayote v1 genome

Gene IDSed0004578
OrganismSechium edule (Chayote v1)
Descriptionheterogeneous nuclear ribonucleoprotein H2 isoform X1
Genome locationLG10:3333309..3335612
RNA-Seq ExpressionSed0004578
SyntenySed0004578
Gene Ontology termsGO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134826.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis sativus]1.8e-13492.54Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQ YGYGSFPPTHAFPVVRLRGLPFNC DIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDN+Y+ S PPPR KR S    DKDQMEYTEILKLRGLPFS TKSNII+FFG
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG

Query:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR
        EF+LAED++ IASRPDGKATGEAYVEFAS EEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR+
Subjt:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR

XP_008440908.1 PREDICTED: heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Cucumis melo]2.3e-13492.16Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQ YGYGSFPPTHAFPVVRLRGLPFNC DIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDN+Y+ S PPPR KR S    DKDQMEYTEILKLRGLPFS TKSNII+FFG
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG

Query:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR
        EF+LAED++ IASRPDGKATGEAYVEFAS EEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR+
Subjt:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR

XP_022977310.1 heterogeneous nuclear ribonucleoprotein H-like isoform X1 [Cucurbita maxima]1.6e-13291.04Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGY+VGSKRQRMMEPNPYFAVSSSTAGFQ YGYGSFPPTHAFPVVRLRGLPFNC DIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG
        VVFAGS+QVEFALQRDRQNMGRRYVEVF CKRQDYYNAVAAEVNYEGIY+N+YN S PPPR KR S    DKDQMEYTEILKLRGLPFS TKSNII+FFG
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG

Query:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR
        EF+LAE+++ IASRPDGKATGEAYVEFAS EEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR+
Subjt:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR

XP_023544122.1 heterogeneous nuclear ribonucleoprotein H-like isoform X1 [Cucurbita pepo subsp. pepo]1.1e-13391.79Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQ YGYGSFPPTHAFPVVRLRGLPFNC DIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG
        VVFAGS+QVEFALQRDRQNMGRRYVEVF CKRQDYYNAVAAEVNYEGIYDN+YN S PPPR KR S    DKDQMEYTEILKLRGLPFS TKSNII+FFG
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG

Query:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR
        EF+LAE+++ IASRPDGKATGEAYVEFASVE+AKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR+
Subjt:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR

XP_038882740.1 heterogeneous nuclear ribonucleoprotein H2 isoform X1 [Benincasa hispida]3.9e-13492.16Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQ YGYGSFPPTHAFPVVRLRGLPFNC DIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVA+EVNYEGIYDN+Y+ S PPPR KR S    DKDQMEYTEILKLRGLPFS TKSNII+FFG
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG

Query:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR
        EF+LAED++ IASRPDGKATGEAYVEFAS EEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR+
Subjt:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR

TrEMBL top hitse value%identityAlignment
A0A0A0KJN7 RRM domain-containing protein8.5e-13592.54Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQ YGYGSFPPTHAFPVVRLRGLPFNC DIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDN+Y+ S PPPR KR S    DKDQMEYTEILKLRGLPFS TKSNII+FFG
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG

Query:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR
        EF+LAED++ IASRPDGKATGEAYVEFAS EEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR+
Subjt:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR

A0A1S4DTH1 heterogeneous nuclear ribonucleoprotein H2 isoform X11.1e-13492.16Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQ YGYGSFPPTHAFPVVRLRGLPFNC DIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDN+Y+ S PPPR KR S    DKDQMEYTEILKLRGLPFS TKSNII+FFG
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG

Query:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR
        EF+LAED++ IASRPDGKATGEAYVEFAS EEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR+
Subjt:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR

A0A6J1EFC5 heterogeneous nuclear ribonucleoprotein H2-like isoform X16.7e-13290.67Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSST GFQ YGYGSFPPTHAFPVVRLRGLPFNC+DIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG
        VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNA+AAEVNYEGIYDN+Y+ S PPPR KR S    DKDQMEYTEILKLRGLPFS  KS+II+FFG
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG

Query:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR
        EF+LAED++ IASRPDGKATGEAYVEFAS EEAKRAMSKDKMTIGSRYVELFPST NEARRAESRSR+
Subjt:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR

A0A6J1GEF2 heterogeneous nuclear ribonucleoprotein H-like isoform X11.4e-13291.04Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQ YGYGSFPPTHAFPVVRLRGLPFNC DIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG
        VVFAGS+QVEFALQRDRQNMGRRYVEVF CKRQDYYNAVAAEVNYEGIYDN+YN S PPPR KR S    DKDQMEYTEILKLRGLPFS TKSNII+FFG
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG

Query:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR
        EF+LAE+++ IASR DGKATGEAYVEFAS E+AKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR+
Subjt:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR

A0A6J1IJJ3 heterogeneous nuclear ribonucleoprotein H-like isoform X17.9e-13391.04Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYGPRGAMLGSGGVSDGY+VGSKRQRMMEPNPYFAVSSSTAGFQ YGYGSFPPTHAFPVVRLRGLPFNC DIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG
        VVFAGS+QVEFALQRDRQNMGRRYVEVF CKRQDYYNAVAAEVNYEGIY+N+YN S PPPR KR S    DKDQMEYTEILKLRGLPFS TKSNII+FFG
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFG

Query:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR
        EF+LAE+++ IASRPDGKATGEAYVEFAS EEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR+
Subjt:  EFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR

SwissProt top hitse value%identityAlignment
P52597 Heterogeneous nuclear ribonucleoprotein F1.4e-2535.75Show/hide
Query:  VVRLRGLPFNCADIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEY
        VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCADIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEY

Query:  NESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFP
          S P      S+D   D         ++LRGLPF  TK  I+ FF    +  + + +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F 
Subjt:  NESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFP

Query:  STPNEAR
        S+  E R
Subjt:  STPNEAR

Q3US41 Epithelial splicing regulatory protein 11.4e-2533.8Show/hide
Query:  VVRLRGLPFNCADIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNE
        VVR RGLP+  +D DI +FF GL+I      L +N  GR  GEA V F      + ALQR + +MG RY+EV++   +D+        N    + ++ N+
Subjt:  VVRLRGLPFNCADIDIFKFFAGLDIVD---VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNE

Query:  SPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFGE---FNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELF
                                I+++RGLPF+AT   ++ FFG+       ++ +   + PDG+ TG+A+V FA  E A+ A+ K K  +G RY+ELF
Subjt:  SPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFGE---FNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELF

Query:  PSTPNEARRAESR
         ST  E ++  +R
Subjt:  PSTPNEARRAESR

Q5E9J1 Heterogeneous nuclear ribonucleoprotein F1.4e-2536.23Show/hide
Query:  VVRLRGLPFNCADIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEY
        VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCADIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEY

Query:  NESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFP
          S P      S+D   D         ++LRGLPF  TK  II FF    +  + + +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F 
Subjt:  NESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFP

Query:  STPNEAR
        S+  E R
Subjt:  STPNEAR

Q60HC3 Heterogeneous nuclear ribonucleoprotein F1.4e-2535.75Show/hide
Query:  VVRLRGLPFNCADIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEY
        VV+LRGLP++C+  D+  F +   I D       +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCADIDIFKFFAGLDIVD-----VLLVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEY

Query:  NESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFP
          S P      S+D   D         ++LRGLPF  TK  I+ FF    +  + + +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F 
Subjt:  NESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFP

Query:  STPNEAR
        S+  E R
Subjt:  STPNEAR

Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F1.4e-2535.75Show/hide
Query:  VVRLRGLPFNCADIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEY
        VV+LRGLP++C+  D+  F +   I D +     +  + GR  GEAFV       V+ AL++DR++MG RY+EVF+  R +               D   
Subjt:  VVRLRGLPFNCADIDIFKFFAGLDIVDVL-----LVNKNGRFMGEAFVVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEY

Query:  NESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFP
          S P      S+D   D         ++LRGLPF  TK  I+ FF    +  + + +   P+GK TGEA+V+FAS E A++A+ K K  IG RY+E+F 
Subjt:  NESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFP

Query:  STPNEAR
        S+  E R
Subjt:  STPNEAR

Arabidopsis top hitse value%identityAlignment
AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-6144.79Show/hide
Query:  GSGGVSDGYEVGSKRQRMME---PNPYFAV-SSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAG
        G G   DG E+G KRQRM++   P P++    SS   +  YG+ + PP   FP VRLRGLPF+CA++D+ +FF GLD+VDVL V++N +  GEAF V   
Subjt:  GSGGVSDGYEVGSKRQRMME---PNPYFAV-SSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAG

Query:  SVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIY-------------------------DNEYNESPPPPRH-KRSSDKEKDKDQMEYTE
         +QV+FALQ++RQNMGRRYVEVFR  +Q+YY A+A EV    ++                             +    P RH +R+   +  K+ +E+T 
Subjt:  SVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIY-------------------------DNEYNESPPPPRH-KRSSDKEKDKDQMEYTE

Query:  ILKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR
        IL+LRGLPFSA K +I+DFF +F L+ED V +    +G+ TGEA+VEF + E+++ AM KD+ T+GSRY+ELFPS+  E   A SR R
Subjt:  ILKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSR

AT4G36960.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.5e-0631.76Show/hide
Query:  LKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR
        L + G+P+      + D+  +F   ED + +  R  G++ G  YV FAS E+AK A+ K +  +G+R +E+  +TP E  R  ++
Subjt:  LKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR

AT4G36960.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.5e-0631.76Show/hide
Query:  LKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR
        L + G+P+      + D+  +F   ED + +  R  G++ G  YV FAS E+AK A+ K +  +G+R +E+  +TP E  R  ++
Subjt:  LKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESR

AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.5e-9466.79Show/hide
Query:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF
        MYG RGAM GSG    GYEVGSKRQRMM+ NPY AV +    F  +GY        FPVVRLRGLPFNCADIDIF+FFAGL+IVDVLLV+KNG+F GEAF
Subjt:  MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAF

Query:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPP---PPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIID
        VVFAG +QVE ALQRDR NMGRRYVEVFRC +QDYYNAVAAE   EG Y+ E   SPP   P R KR S+KEK    +EYTE+LK+RGLP+S  K  II+
Subjt:  VVFAGSVQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPP---PPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIID

Query:  FFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR
        FF  + + + +VQ+  RPDGKATGEA+VEF + EEA+RAM+KDKM+IGSRYVELFP+T  EARRAE+RSR+
Subjt:  FFGEFNLAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR

AT5G66010.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.8e-5264.85Show/hide
Query:  VQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPP---PPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFGEFN
        +QVE ALQRDR NMGRRYVEVFRC +QDYYNAVAAE   EG Y+ E   SPP   P R KR S+KEK    +EYTE+LK+RGLP+S  K  II+FF  + 
Subjt:  VQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPP---PPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFGEFN

Query:  LAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR
        + + +VQ+  RPDGKATGEA+VEF + EEA+RAM+KDKM+IGSRYVELFP+T  EARRAE+RSR+
Subjt:  LAEDKVQIASRPDGKATGEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGACCTAGAGGGGCAATGTTGGGGAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCGAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAG
CAGCAGCACTGCCGGATTTCAATCTTACGGCTATGGGAGTTTTCCACCTACTCATGCCTTTCCTGTGGTTCGCCTTAGAGGGCTTCCCTTCAACTGTGCTGACATTGACA
TTTTCAAGTTCTTTGCTGGACTGGACATTGTGGATGTGCTGCTCGTCAACAAGAATGGGCGGTTCATGGGAGAGGCTTTTGTTGTCTTTGCTGGCTCTGTGCAGGTCGAG
TTCGCATTGCAGCGGGATCGACAGAATATGGGGCGTAGGTACGTTGAAGTCTTCAGATGCAAAAGACAGGATTATTATAATGCTGTTGCTGCTGAAGTAAACTATGAGGG
GATTTATGATAACGAATACAATGAAAGTCCTCCTCCTCCTAGACATAAGAGGTCGAGCGACAAGGAAAAGGACAAGGACCAGATGGAATACACCGAGATACTGAAGCTGC
GTGGACTCCCATTCTCTGCGACAAAATCCAACATCATTGATTTTTTTGGAGAGTTCAACCTCGCTGAAGATAAGGTACAGATTGCAAGTCGCCCGGATGGAAAGGCAACC
GGGGAGGCTTATGTGGAGTTTGCTTCCGTAGAGGAGGCGAAGAGAGCAATGAGCAAGGACAAGATGACAATCGGTTCGAGATATGTGGAGTTGTTCCCTTCAACCCCAAA
TGAAGCTAGAAGAGCTGAGTCGAGGTCAAGACGTTAA
mRNA sequenceShow/hide mRNA sequence
ATCGTATCGTGTTTGTCCAATTCTGGTGGTGAAATCGGAAGCCAAATCCAAGTTCACAAGCCTTGAGTAGCTGTTGGAGATTGAAGACAAGCATGTACGGACCTAGAGGG
GCAATGTTGGGGAGCGGGGGGGTTTCGGATGGGTACGAAGTCGGCTCGAAAAGACAAAGAATGATGGAACCGAATCCCTACTTCGCAGTTAGCAGCAGCACTGCCGGATT
TCAATCTTACGGCTATGGGAGTTTTCCACCTACTCATGCCTTTCCTGTGGTTCGCCTTAGAGGGCTTCCCTTCAACTGTGCTGACATTGACATTTTCAAGTTCTTTGCTG
GACTGGACATTGTGGATGTGCTGCTCGTCAACAAGAATGGGCGGTTCATGGGAGAGGCTTTTGTTGTCTTTGCTGGCTCTGTGCAGGTCGAGTTCGCATTGCAGCGGGAT
CGACAGAATATGGGGCGTAGGTACGTTGAAGTCTTCAGATGCAAAAGACAGGATTATTATAATGCTGTTGCTGCTGAAGTAAACTATGAGGGGATTTATGATAACGAATA
CAATGAAAGTCCTCCTCCTCCTAGACATAAGAGGTCGAGCGACAAGGAAAAGGACAAGGACCAGATGGAATACACCGAGATACTGAAGCTGCGTGGACTCCCATTCTCTG
CGACAAAATCCAACATCATTGATTTTTTTGGAGAGTTCAACCTCGCTGAAGATAAGGTACAGATTGCAAGTCGCCCGGATGGAAAGGCAACCGGGGAGGCTTATGTGGAG
TTTGCTTCCGTAGAGGAGGCGAAGAGAGCAATGAGCAAGGACAAGATGACAATCGGTTCGAGATATGTGGAGTTGTTCCCTTCAACCCCAAATGAAGCTAGAAGAGCTGA
GTCGAGGTCAAGACGTTAAGTGTAGGTAATTCGGTCATGGGTCTAAAGTTTCTCTGATGCTATATTGTTGTACCGAGGGTTTGCTGTCCTTGTTCTTTTCCAATTTGTAG
GATGACATTTTATGGTTGTGGTATAGTTCTCTGCTGTTTAGGCTGAATTTGTGGAGTAAATCAATACTGCATTTTGAGACTGAAGTTAGTCCTATGAGTTCATGACATGG
TTGAAACAATGACCTCTTTTTTTTTCTCTTTTCATTGTGGTATTTGTTTTTTCTGTGGG
Protein sequenceShow/hide protein sequence
MYGPRGAMLGSGGVSDGYEVGSKRQRMMEPNPYFAVSSSTAGFQSYGYGSFPPTHAFPVVRLRGLPFNCADIDIFKFFAGLDIVDVLLVNKNGRFMGEAFVVFAGSVQVE
FALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDNEYNESPPPPRHKRSSDKEKDKDQMEYTEILKLRGLPFSATKSNIIDFFGEFNLAEDKVQIASRPDGKAT
GEAYVEFASVEEAKRAMSKDKMTIGSRYVELFPSTPNEARRAESRSRR