; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004582 (gene) of Chayote v1 genome

Gene IDSed0004582
OrganismSechium edule (Chayote v1)
DescriptionGibberellin-regulated family protein
Genome locationLG01:18633871..18636202
RNA-Seq ExpressionSed0004582
SyntenySed0004582
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608594.1 Snakin-2, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3775.93Show/hide
Query:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT
        MA S LSK L T + +SL V + V A   E VNS+ GVAA P  IQ+IDCGGACASRCKLSSRP+LCKRACGTCCARC CVPPGTSGGYETCPCYA LTT
Subjt:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT

Query:  HGGRRKCP
        HGGRRKCP
Subjt:  HGGRRKCP

XP_022139249.1 gibberellin-regulated protein 11-like [Momordica charantia]2.1e-3874.07Show/hide
Query:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT
        MA S+LSKPL T +F+SL V  FVGAH+      ++G  ADPTKIQNIDCGGACA RCKLSSRPNLCKRACGTCCARC CVPPGTSGGY+ CPCYA +TT
Subjt:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT

Query:  HGGRRKCP
         GGR KCP
Subjt:  HGGRRKCP

XP_022940222.1 gibberellin-regulated protein 1-like [Cucurbita moschata]8.0e-3876.85Show/hide
Query:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT
        MA S LSK L T + +SL V + V A   E VNS+ GVAA P  IQ+IDCGGACASRCKLSSRPNLCKRACGTCCARC CVPPGTSGGYETCPCYA LTT
Subjt:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT

Query:  HGGRRKCP
        HGGRRKCP
Subjt:  HGGRRKCP

XP_022982305.1 gibberellin-regulated protein 1-like [Cucurbita maxima]2.3e-3775Show/hide
Query:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT
        MA S LSK L T + +SL V + VGA   E VNS+ GVAA P  +Q+IDCGGACASRCKLSSRP+LCKRACGTCCARC CVPPGTSGGYETCPCYA +TT
Subjt:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT

Query:  HGGRRKCP
        HGGRRKCP
Subjt:  HGGRRKCP

XP_023525231.1 snakin-2-like [Cucurbita pepo subsp. pepo]2.8e-3875.93Show/hide
Query:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT
        MA S LSK L T + +SL V + VGA D   VNS+ GVAA P  IQ+IDCGGACASRCKLSSRP+LCKRACGTCCARC CVPPGTSGGYETCPCYA +TT
Subjt:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT

Query:  HGGRRKCP
        HGGRRKCP
Subjt:  HGGRRKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LDK8 Uncharacterized protein7.1e-3272.12Show/hide
Query:  LSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAA-DPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGR
        L K +   +  SL V  FV A D  +V    GVAA  PTK QNIDCGGACASRCKLSSRPNLC RACGTCCARC CVPPGTSG YE CPCYA LTTHGGR
Subjt:  LSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAA-DPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGR

Query:  RKCP
        RKCP
Subjt:  RKCP

A0A5D3E7E4 Gibberellin-regulated protein 11-like2.7e-3173.68Show/hide
Query:  IFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP
        + +SL V  FV A D  +     GVAA PT  QNI+CGGACASRCKLSSRPNLCKRACGTCCARC CVPPGTSG Y  CPCYA+LTTHGGRRKCP
Subjt:  IFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP

A0A6J1CCE1 gibberellin-regulated protein 11-like1.0e-3874.07Show/hide
Query:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT
        MA S+LSKPL T +F+SL V  FVGAH+      ++G  ADPTKIQNIDCGGACA RCKLSSRPNLCKRACGTCCARC CVPPGTSGGY+ CPCYA +TT
Subjt:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT

Query:  HGGRRKCP
         GGR KCP
Subjt:  HGGRRKCP

A0A6J1FJ01 gibberellin-regulated protein 1-like3.9e-3876.85Show/hide
Query:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT
        MA S LSK L T + +SL V + V A   E VNS+ GVAA P  IQ+IDCGGACASRCKLSSRPNLCKRACGTCCARC CVPPGTSGGYETCPCYA LTT
Subjt:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT

Query:  HGGRRKCP
        HGGRRKCP
Subjt:  HGGRRKCP

A0A6J1J2A8 gibberellin-regulated protein 1-like1.1e-3775Show/hide
Query:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT
        MA S LSK L T + +SL V + VGA   E VNS+ GVAA P  +Q+IDCGGACASRCKLSSRP+LCKRACGTCCARC CVPPGTSGGYETCPCYA +TT
Subjt:  MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTT

Query:  HGGRRKCP
        HGGRRKCP
Subjt:  HGGRRKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 115.2e-2458.59Show/hide
Query:  LFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP
        L   + ISL V  FV A   ++V S D           IDC   C  RC LSSRPNLC RACGTCCARC CV PGTSG Y+ CPCY  LTTHGGRRKCP
Subjt:  LFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP

P46687 Gibberellin-regulated protein 31.2e-2050.53Show/hide
Query:  IFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP
        + + LF       H H   +S  G       +  IDCGG C  RC  SSRPNLC RAC +CC RC CVPPGT+G +  CPCYA +TT GGR KCP
Subjt:  IFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP

P46688 Gibberellin-regulated protein 29.3e-2162.16Show/hide
Query:  AADPTK----IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP
        AAD  K    +  IDCGG C  RC  SSR  LC RAC +CC+RC CVPPGTSG    CPCYA +TTHGGR KCP
Subjt:  AADPTK----IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP

P46689 Gibberellin-regulated protein 18.1e-2557.28Show/hide
Query:  LSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRR
        +SK L   + ISL V   V A D E     +G A      + IDCG AC +RC+LS RP LC RACGTCC RC CVPPGT G Y+ C CYA LTTHGGRR
Subjt:  LSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRR

Query:  KCP
        KCP
Subjt:  KCP

Q93X17 Snakin-26.0e-2858.25Show/hide
Query:  LSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRR
        +SK LF  + +SL +   V +   + V S + ++      + IDCGGACA+RC+LSSRP LC RACGTCCARC CVPPGTSG  ETCPCYA LTTHG +R
Subjt:  LSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRR

Query:  KCP
        KCP
Subjt:  KCP

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 15.7e-2657.28Show/hide
Query:  LSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRR
        +SK L   + ISL V   V A D E     +G A      + IDCG AC +RC+LS RP LC RACGTCC RC CVPPGT G Y+ C CYA LTTHGGRR
Subjt:  LSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRR

Query:  KCP
        KCP
Subjt:  KCP

AT1G75750.2 GAST1 protein homolog 19.8e-2655.34Show/hide
Query:  LSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRR
        +SK L   + ISL V   V A ++      +G A      + IDCG AC +RC+LS RP LC RACGTCC RC CVPPGT G Y+ C CYA LTTHGGRR
Subjt:  LSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRR

Query:  KCP
        KCP
Subjt:  KCP

AT2G18420.1 Gibberellin-regulated family protein3.7e-2558.59Show/hide
Query:  LFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP
        L   + ISL V  FV A   ++V S D           IDC   C  RC LSSRPNLC RACGTCCARC CV PGTSG Y+ CPCY  LTTHGGRRKCP
Subjt:  LFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP

AT4G09600.1 GAST1 protein homolog 38.6e-2250.53Show/hide
Query:  IFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP
        + + LF       H H   +S  G       +  IDCGG C  RC  SSRPNLC RAC +CC RC CVPPGT+G +  CPCYA +TT GGR KCP
Subjt:  IFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP

AT4G09610.1 GAST1 protein homolog 26.6e-2262.16Show/hide
Query:  AADPTK----IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP
        AAD  K    +  IDCGG C  RC  SSR  LC RAC +CC+RC CVPPGTSG    CPCYA +TTHGGR KCP
Subjt:  AADPTK----IQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTTCTCTTCTTTCCAAACCTCTCTTCACTTTTATTTTCATCTCTCTTTTTGTAGCTTACTTTGTTGGTGCTCATGATCATGAAATTGTGAACTCAATGGATGG
TGTTGCTGCTGATCCTACTAAGATTCAAAACATTGATTGTGGAGGAGCTTGTGCATCAAGGTGCAAATTATCTTCAAGGCCAAACCTTTGCAAGAGGGCATGCGGCACAT
GCTGTGCACGTTGCAGGTGCGTGCCCCCGGGCACCTCCGGCGGCTACGAAACCTGCCCGTGCTACGCTCAGTTGACAACCCACGGCGGCCGGCGAAAGTGCCCCTAA
mRNA sequenceShow/hide mRNA sequence
GCAATAACTTTTAAAAAAATTTGGAGTTTTTCATTACAATTCTCTCATGGCCACTTCTCTTCTTTCCAAACCTCTCTTCACTTTTATTTTCATCTCTCTTTTTGTAGCTT
ACTTTGTTGGTGCTCATGATCATGAAATTGTGAACTCAATGGATGGTGTTGCTGCTGATCCTACTAAGATTCAAAACATTGATTGTGGAGGAGCTTGTGCATCAAGGTGC
AAATTATCTTCAAGGCCAAACCTTTGCAAGAGGGCATGCGGCACATGCTGTGCACGTTGCAGGTGCGTGCCCCCGGGCACCTCCGGCGGCTACGAAACCTGCCCGTGCTA
CGCTCAGTTGACAACCCACGGCGGCCGGCGAAAGTGCCCCTAAATAAAAACCCCAGCTGTTCTTTACATAAATATTTCTGCAGCATGCAAAAGTCCATAATCTCTATCAC
TGTTATATGTTCATGTGTGTG
Protein sequenceShow/hide protein sequence
MATSLLSKPLFTFIFISLFVAYFVGAHDHEIVNSMDGVAADPTKIQNIDCGGACASRCKLSSRPNLCKRACGTCCARCRCVPPGTSGGYETCPCYAQLTTHGGRRKCP