; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004583 (gene) of Chayote v1 genome

Gene IDSed0004583
OrganismSechium edule (Chayote v1)
Description50S ribosomal protein L2, chloroplastic
Genome locationContig00297:109250..110684
RNA-Seq ExpressionSed0004583
SyntenySed0004583
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002171 - Ribosomal protein L2
IPR008991 - Translation protein SH3-like domain superfamily
IPR012340 - Nucleic acid-binding, OB-fold
IPR014726 - Ribosomal protein L2, domain 3
IPR022666 - Ribosomal Proteins L2, RNA binding domain
IPR022669 - Ribosomal protein L2, C-terminal
IPR022671 - Ribosomal protein L2, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QDH07784.1 ribosomal protein L2 [Cucumis sativus]1.5e-8570.43Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD-------------------------
        K NPRNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYICLIHYGD                         
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD-------------------------

Query:  ---------ESTSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPV
                 +STSTDMPLGTAIHNIEITLGKG             I + G    +K+   EVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPV
Subjt:  ---------ESTSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPV

Query:  VRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        VRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  VRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

TYI09266.1 hypothetical protein ES332_A09G060200v1 [Gossypium tomentosum]6.7e-8672.47Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD------------------------E
        K NPRNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYICLIHYGD                        +
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD------------------------E

Query:  STSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVD
        STSTDMPLGTAIHNIEITLG+G             I + G    +K+   EVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVD
Subjt:  STSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVD

Query:  HPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        HPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  HPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

XP_037491688.1 50S ribosomal protein L2, chloroplastic-like [Jatropha curcas]3.2e-8877.92Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD--------ESTSTDMPLGTAIHNIE
        K NPRNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYICLIHYGD        ESTSTDMPLGTAIHNIE
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD--------ESTSTDMPLGTAIHNIE

Query:  ITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKK
        ITLG+G             I + G    +K+   EVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKK
Subjt:  ITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKK

Query:  PATPWGYPALGRRSRKRNKYSDNLILRRRSK
        PATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  PATPWGYPALGRRSRKRNKYSDNLILRRRSK

YP_009420859.1 ribosomal protein L2 [Citrullus colocynthis]4.3e-8568.68Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD-------------------------
        K NPRNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYICLIHYGD                         
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD-------------------------

Query:  -----------------ESTSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSK
                         ESTSTDMPLGTAIHNIEITLGKG             I + G    +K+   EVRLISKNCSATVGQVGNAGVNQKSLGRAGSK
Subjt:  -----------------ESTSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSK

Query:  CWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        CWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  CWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

YP_009560509.1 ribosomal protein L2 [Acer amplum subsp. catalpifolium]1.1e-8571.15Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYG--------------------------
        K NPRNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYICLIHYG                          
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYG--------------------------

Query:  ----DESTSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV
            DESTSTDMPLGTAIHNIEITLGKG             I + G    +K+   EVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGV
Subjt:  ----DESTSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV

Query:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        VMNPVDHPHGGGEGRAPIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

TrEMBL top hitse value%identityAlignment
A0A346KKA3 50S ribosomal protein L2, chloroplastic8.0e-8568.44Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD-------------------------
        K NPRNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYICLIHYGD                         
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD-------------------------

Query:  ---------------ESTSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCW
                       ESTSTDMPLGTAIHNIEITLG+G             I + G    +K+   EVRLISKNCSATVGQVGN GVNQKSLGRAGSKCW
Subjt:  ---------------ESTSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCW

Query:  LGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        LGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  LGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

A0A5D2P0J4 50S ribosomal protein L2, chloroplastic3.2e-8672.47Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD------------------------E
        K NPRNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYICLIHYGD                        +
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD------------------------E

Query:  STSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVD
        STSTDMPLGTAIHNIEITLG+G             I + G    +K+   EVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVD
Subjt:  STSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVD

Query:  HPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        HPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  HPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

A0A5J6XKB7 50S ribosomal protein L2, chloroplastic2.3e-8467.67Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD-------------------------
        K N RNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYICLIHYGD                         
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGD-------------------------

Query:  ------------------ESTSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGS
                          ESTSTDMPLGTAIHNIEITLGKG             I + G    +K+   EVRLISKNCSATVGQVGNAGVNQKSLGRAGS
Subjt:  ------------------ESTSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGS

Query:  KCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        KCWLGKRPVVRGVVMNPVDHPHGGGEGRAP+GRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  KCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

A0A6B9QS72 50S ribosomal protein L2, chloroplastic1.4e-8467.92Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYG--------------------------
        K NPRNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYICLIHYG                          
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYG--------------------------

Query:  ----------------DESTSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSK
                        DESTSTDMPLGTAIHNIEITLGKG             I + G    +K+   EVRLISKNCSATVGQVGN GVNQKSLGRAGSK
Subjt:  ----------------DESTSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSK

Query:  CWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        CWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  CWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

A0A7D4XT69 50S ribosomal protein L2, chloroplastic1.0e-8470.47Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDES-----------------------
        K NPRNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYICLIHYGD                         
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDES-----------------------

Query:  --------TSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRG
                 STDMPLGTAIHNIEITLGKG             I + G    +K+   EVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRG
Subjt:  --------TSTDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRG

Query:  VVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        VVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  VVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

SwissProt top hitse value%identityAlignment
A0ZZ76 50S ribosomal protein L2, chloroplastic5.9e-8568.77Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS---------------------
        K NPRNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYIC IHYGD                         
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS---------------------

Query:  ---------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV
                 TDMPLGTAIHNIEITLG+G             I + G    +K+   EVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGV
Subjt:  ---------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV

Query:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        VMNPVDHPHGGGEGRAPIGRKKPATPWG+PALGRRSRKRNKYSDNLILRRRSK
Subjt:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

A4GYV2 50S ribosomal protein L2, chloroplastic1.7e-8469.17Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS---------------------
        K N RNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +K IYGRIVTIEYD  RNAYICLIHYGD                         
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS---------------------

Query:  ---------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV
                 TDMPLGTAIHNIEITLG+G             I + G    +K+   EVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV
Subjt:  ---------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV

Query:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

B1A976 50S ribosomal protein L2, chloroplastic2.4e-8669.96Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS---------------------
        K NPRNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYICLIHYGD                         
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS---------------------

Query:  ---------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV
                 TDMPLGTAIHNIEITLGKG             I + G    +K+   EVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGV
Subjt:  ---------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV

Query:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

B1NWJ1 50S ribosomal protein L2, chloroplastic1.3e-8468.36Show/hide
Query:  QSSKINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS------------------
        +S+  N R NLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYICLIHYGD                      
Subjt:  QSSKINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS------------------

Query:  ------------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVV
                    TDMPLGTAIHNIEITLGKG             I + G    +K+   EVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVV
Subjt:  ------------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVV

Query:  RGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        RGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  RGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Q2L944 50S ribosomal protein L2, chloroplastic5.3e-8669.57Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS---------------------
        K NPRNNLIYGQHRCGKGRN           GGHKRLYRKIDFRRN +KDIYGRIVTIEYD  RNAYICLIHYGD                         
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS---------------------

Query:  ---------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV
                 TDMPLGTAIHNIEITLG+G             I + G    +K+   EVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGV
Subjt:  ---------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV

Query:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Subjt:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

Arabidopsis top hitse value%identityAlignment
AT2G44065.1 Ribosomal protein L2 family1.7e-1841.27Show/hide
Query:  MPLGTAIHNIEITLGKGT------------IKEIGH----IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        M +GT IHNIE+  G+G             +KE       IK+   + + I+  C AT+G V N     K L +AG   WLG RP VRGV MNP DHPHG
Subjt:  MPLGTAIHNIEITLGKGT------------IKEIGH----IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

Query:  GGEGRAPIGRKKPAT---PWGYPALG
        GGEG++     +  T   PWG P  G
Subjt:  GGEGRAPIGRKKPAT---PWGYPALG

AT2G44065.2 Ribosomal protein L2 family1.7e-1841.27Show/hide
Query:  MPLGTAIHNIEITLGKGT------------IKEIGH----IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG
        M +GT IHNIE+  G+G             +KE       IK+   + + I+  C AT+G V N     K L +AG   WLG RP VRGV MNP DHPHG
Subjt:  MPLGTAIHNIEITLGKGT------------IKEIGH----IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG

Query:  GGEGRAPIGRKKPAT---PWGYPALG
        GGEG++     +  T   PWG P  G
Subjt:  GGEGRAPIGRKKPAT---PWGYPALG

AT3G51190.1 Ribosomal protein L2 family7.1e-0932.19Show/hide
Query:  AYICLI--HYGDESTSTDMPLGTAIHNIEITLGKGTIKEIGHIKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRG
        A IC +  H GD        L  A  +  I +          +K+     +++   C A +GQV   G  +K L +AG+          CW    PVVRG
Subjt:  AYICLI--HYGDESTSTDMPLGTAIHNIEITLGKGTIKEIGHIKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRG

Query:  VVMNPVDHPHGGGE----GRAPIGR--KKPATPWGYPALGRRSRKR
        V MNPV+HPHGGG     G A   R  K      G  A  R  R+R
Subjt:  VVMNPVDHPHGGGE----GRAPIGR--KKPATPWGYPALGRRSRKR

ATCG00830.1 ribosomal protein L29.7e-8366.8Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS---------------------
        K NPRNNLI GQH CGKGRN           GGHKRLYRKIDFRRN  KDIYGRIVTIEYD  RNAYICLIHYGD                         
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS---------------------

Query:  ---------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV
                 TDMPLGTAIHNIEITLG+G             I + G    +K+   EVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGV
Subjt:  ---------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV

Query:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        VMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRR+RKR KYS+ LILRRRSK
Subjt:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK

ATCG01310.1 ribosomal protein L29.7e-8366.8Show/hide
Query:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS---------------------
        K NPRNNLI GQH CGKGRN           GGHKRLYRKIDFRRN  KDIYGRIVTIEYD  RNAYICLIHYGD                         
Subjt:  KINPRNNLIYGQHRCGKGRN-----------GGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTS---------------------

Query:  ---------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV
                 TDMPLGTAIHNIEITLG+G             I + G    +K+   EVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGV
Subjt:  ---------TDMPLGTAIHNIEITLGKG------------TIKEIGH---IKITFWEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGV

Query:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
        VMNPVDHPHGGGEGRAPIGRKKP TPWGYPALGRR+RKR KYS+ LILRRRSK
Subjt:  VMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCGTAGACAGTCAAGTAAAATCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGGAGGTCATAAGCGTCTATACCGTAAAAT
CGATTTTCGACGGAACGGAAAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCTAATCAGAAATGCATACATTTGTCTCATACACTATGGGGATGAATCTA
CTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGACAATTAAGGAAATCGGCCACATTAAAATTACCTTCTGGGAGGTCCGT
TTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAGTGTTGGCTAGGTAAGCGTCCTGT
AGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTG
GAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCGTAGACAGTCAAGTAAAATCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGGAGGTCATAAGCGTCTATACCGTAAAAT
CGATTTTCGACGGAACGGAAAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCTAATCAGAAATGCATACATTTGTCTCATACACTATGGGGATGAATCTA
CTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGACAATTAAGGAAATCGGCCACATTAAAATTACCTTCTGGGAGGTCCGT
TTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAGTGTTGGCTAGGTAAGCGTCCTGT
AGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTG
GAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAA
Protein sequenceShow/hide protein sequence
MGRRQSSKINPRNNLIYGQHRCGKGRNGGHKRLYRKIDFRRNGKKDIYGRIVTIEYDLIRNAYICLIHYGDESTSTDMPLGTAIHNIEITLGKGTIKEIGHIKITFWEVR
LISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK