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Sed0004586 (gene) of Chayote v1 genome

Gene IDSed0004586
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:2945490..2945933
RNA-Seq ExpressionSed0004586
SyntenySed0004586
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044340.1 putative beta-D-xylosidase 5 isoform X2 [Cucumis melo var. makuwa]1.3e-2059.29Show/hide
Query:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL---NDESSHRRTQSNFQQPMFEYSD-QRSAHEFTQSRSI-----------SNGFG----SYPGQV
        MEGLIPY+ HA KKQKP H+YRSQSVGS+RSYHLL   NDESSHRRT+S++Q P FE+ D QR + E T SRS+           SNGF     SY GQV
Subjt:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL---NDESSHRRTQSNFQQPMFEYSD-QRSAHEFTQSRSI-----------SNGFG----SYPGQV

Query:  SNIATY-YGHAPR
        SN   Y YG+ PR
Subjt:  SNIATY-YGHAPR

KAG6576920.1 hypothetical protein SDJN03_24494, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2370.83Show/hide
Query:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL-NDESSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSISNG-FG-SYPGQVSNIATYYGHAPR
        MEGLIPY+ HA KKQKP H+YRSQSVGS+RSYHLL NDESSHRRT+S+FQ P FEY DQRS HE   SRS+S G FG SY GQVSN     G+ PR
Subjt:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL-NDESSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSISNG-FG-SYPGQVSNIATYYGHAPR

KAG7014945.1 NADH-ubiquinone oxidoreductase chain 4L, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2375.58Show/hide
Query:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL-NDESSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSISNG-FG-SYPGQVSN
        MEGLIPY+ HA KKQKP H+YRSQSVGS+RSYHLL NDESSHRRT+S+FQ P FEY DQRS HE   SRS+S G FG SY GQVSN
Subjt:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL-NDESSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSISNG-FG-SYPGQVSN

KGN52765.1 hypothetical protein Csa_015267 [Cucumis sativus]1.6e-2159.82Show/hide
Query:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL---NDESSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSI-----------SNGFG----SYPGQVS
        MEGLIPY+ HA KKQKP H+YRSQSVGS+RSYHLL   NDESSHRRT+S++Q P FE+ DQRS  E T SRS+           SNGF     SY GQVS
Subjt:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL---NDESSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSI-----------SNGFG----SYPGQVS

Query:  NIATY-YGHAPR
        N   Y YG+  R
Subjt:  NIATY-YGHAPR

XP_038905929.1 uncharacterized protein LOC120091851 [Benincasa hispida]1.6e-2663.3Show/hide
Query:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL--NDESSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSIS---------------NGFGSYPGQVSN
        MEGLIPY+ HA KKQKP HNYRSQSVGS+RSYHLL  NDESSHRRT+S+FQ P  E+SDQRS HE   SRS+S               +GF SYPGQV+N
Subjt:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL--NDESSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSIS---------------NGFGSYPGQVSN

Query:  IATYYGHAP
          TYYG+ P
Subjt:  IATYYGHAP

TrEMBL top hitse value%identityAlignment
A0A0A0KT06 Uncharacterized protein7.6e-2259.82Show/hide
Query:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL---NDESSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSI-----------SNGFG----SYPGQVS
        MEGLIPY+ HA KKQKP H+YRSQSVGS+RSYHLL   NDESSHRRT+S++Q P FE+ DQRS  E T SRS+           SNGF     SY GQVS
Subjt:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL---NDESSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSI-----------SNGFG----SYPGQVS

Query:  NIATY-YGHAPR
        N   Y YG+  R
Subjt:  NIATY-YGHAPR

A0A2N9EKL5 Uncharacterized protein3.8e-1348.98Show/hide
Query:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLLN-----DESSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSISNG------------FGSYPGQV
        MEGLIP+++HA KKQ+P ++YR  S GS+RSYHLLN       SSHRRT+S FQ P  E+  QRS HE+ +S S++               GSYP QV
Subjt:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLLN-----DESSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSISNG------------FGSYPGQV

A0A5A7TM95 Putative beta-D-xylosidase 5 isoform X26.4e-2159.29Show/hide
Query:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL---NDESSHRRTQSNFQQPMFEYSD-QRSAHEFTQSRSI-----------SNGFG----SYPGQV
        MEGLIPY+ HA KKQKP H+YRSQSVGS+RSYHLL   NDESSHRRT+S++Q P FE+ D QR + E T SRS+           SNGF     SY GQV
Subjt:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLL---NDESSHRRTQSNFQQPMFEYSD-QRSAHEFTQSRSI-----------SNGFG----SYPGQV

Query:  SNIATY-YGHAPR
        SN   Y YG+ PR
Subjt:  SNIATY-YGHAPR

A0A5N6QPG1 Uncharacterized protein3.8e-1353.61Show/hide
Query:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLLNDE-----SSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSISNGFGSYPGQVSNIATYYGHAP
        MEGLIPY+VHA KKQKP H+YRS S GS RSYHLL +      SSHRRT+S+FQ P  E+ +QRS  E    RS S    S P   S +A+Y    P
Subjt:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLLNDE-----SSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSISNGFGSYPGQVSNIATYYGHAP

A0A6P6AFC0 uncharacterized protein LOC1113090191.2e-1450Show/hide
Query:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLLNDE--------SSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSISNGFG-SYPGQV--SNIATY
        MEGLIPY++ A +KQKP H YRS S+GS+RSYHLL  +        SSHRRT+S+FQ P  E+ +QRS  +F  ++S +NG   +YP +V  SN+ +Y
Subjt:  MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLLNDE--------SSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSISNGFG-SYPGQV--SNIATY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19615.1 unknown protein6.8e-0746.51Show/hide
Query:  MEGLIPYIVHAFKK-QKPPH-NYRSQSVGSNRSYHLL---------NDESSHRRTQSNFQ-QPMFEYSDQRSA---HEFTQSRSIS
        MEGLIPY++HA KK  KP H  YRS SVGS+RSY  L            SSHRRT+S++    + +  DQRS+    EF    S S
Subjt:  MEGLIPYIVHAFKK-QKPPH-NYRSQSVGSNRSYHLL---------NDESSHRRTQSNFQ-QPMFEYSDQRSA---HEFTQSRSIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCTTAATTCCATATATTGTCCATGCATTCAAGAAGCAAAAGCCACCCCACAACTATAGAAGCCAATCCGTCGGTTCAAACCGGAGCTACCATCTTCTCAATGA
CGAGTCGTCTCACCGACGAACGCAGTCGAATTTTCAGCAACCGATGTTCGAGTATTCGGACCAGCGATCGGCTCACGAGTTCACGCAGTCTCGCAGCATTAGCAACGGCT
TTGGATCATATCCTGGCCAGGTTTCAAATATTGCTACTTATTATGGTCATGCTCCTCGTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTCTTTTGTGATCCAAGTCTTGAAAGAAGAACAAACAAGATGGAAGGCTTAATTCCATATATTGTCCATGCATTCAAGAAGCAAAAGCCACCCCACAACTATAGAAGC
CAATCCGTCGGTTCAAACCGGAGCTACCATCTTCTCAATGACGAGTCGTCTCACCGACGAACGCAGTCGAATTTTCAGCAACCGATGTTCGAGTATTCGGACCAGCGATC
GGCTCACGAGTTCACGCAGTCTCGCAGCATTAGCAACGGCTTTGGATCATATCCTGGCCAGGTTTCAAATATTGCTACTTATTATGGTCATGCTCCTCGTTGTTGATCAA
TTGACAAAGTGAGAAGAGTTGAAGATCAATTTGTGATATAGTTTACTCTTATTTATTAATTTTTCTATAAATTTGTTTGAATTTATTGGTGGTGAATATCAATTTGTAAA
AGAG
Protein sequenceShow/hide protein sequence
MEGLIPYIVHAFKKQKPPHNYRSQSVGSNRSYHLLNDESSHRRTQSNFQQPMFEYSDQRSAHEFTQSRSISNGFGSYPGQVSNIATYYGHAPRC