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Sed0004590 (gene) of Chayote v1 genome

Gene IDSed0004590
OrganismSechium edule (Chayote v1)
Description17.8 kDa class I heat shock protein-like
Genome locationLG04:40490936..40491611
RNA-Seq ExpressionSed0004590
SyntenySed0004590
Gene Ontology termsNA
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR031107 - Small heat shock protein HSP20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD42905.1 TPA_asm: hypothetical protein HUJ06_001135 [Nelumbo nucifera]2.4e-0848.19Show/hide
Query:  MAMIPSIFGDRRSNIFDPFSM--------------------------------KANMDNGVLTVTVPKMEQKKPEIKSIDISG
        M++IPSIFG RRSNIFDPFSM                                KA ++NGVLTVTVPK E KKPE+K+I+ISG
Subjt:  MAMIPSIFGDRRSNIFDPFSM--------------------------------KANMDNGVLTVTVPKMEQKKPEIKSIDISG

KAF3652853.1 putative WRKY transcription factor 33-like [Capsicum annuum]5.9e-0739.22Show/hide
Query:  MAMIPSIFGDRRSNIFDPFSM----------------------------------------------------KANMDNGVLTVTVPKMEQKKPEIKSID
        M++IPS FGDRRSNIFDPFS+                                                    KA M+NGVLTVTVPK E+KKPE+K+ID
Subjt:  MAMIPSIFGDRRSNIFDPFSM----------------------------------------------------KANMDNGVLTVTVPKMEQKKPEIKSID

Query:  IS
        IS
Subjt:  IS

PHU24899.1 hypothetical protein BC332_03231 [Capsicum chinense]5.0e-0638.24Show/hide
Query:  MAMIPSIFGDRRSNIFDPFSM----------------------------------------------------KANMDNGVLTVTVPKMEQKKPEIKSID
        M++IPS FGDRRSNIFDPFS+                                                    KA M+N VLTVTVPK E+KKPE+K+ID
Subjt:  MAMIPSIFGDRRSNIFDPFSM----------------------------------------------------KANMDNGVLTVTVPKMEQKKPEIKSID

Query:  IS
        IS
Subjt:  IS

PKI36238.1 hypothetical protein CRG98_043390 [Punica granatum]7.0e-0841.76Show/hide
Query:  MAMIPSIFGDRRSNIFDPFSM----------------------------------------KANMDNGVLTVTVPKMEQKKPEIKSIDISG
        M++IPS FG RRSN+FDPFS+                                        KA+M+NGVLTVTVPK+E+KKPE+K+I+ISG
Subjt:  MAMIPSIFGDRRSNIFDPFSM----------------------------------------KANMDNGVLTVTVPKMEQKKPEIKSIDISG

XP_038891373.1 17.8 kDa class I heat shock protein-like [Benincasa hispida]5.0e-0690.32Show/hide
Query:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG
        +KANMDNGVLTVTVPKME+KKPE+KSIDISG
Subjt:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG

TrEMBL top hitse value%identityAlignment
A0A0A0KLT1 SHSP domain-containing protein6.6e-1272.73Show/hide
Query:  MAMIPSIFGDRRSNIFDPFSMKAN----MDNGVLTVTVPKMEQKKPEIKSIDISG
        MA+IPSIF  RRSN+FDPFS+  +      NGVLTVTVPKME+KKPEIKSIDISG
Subjt:  MAMIPSIFGDRRSNIFDPFSMKAN----MDNGVLTVTVPKMEQKKPEIKSIDISG

A0A2G3A564 SHSP domain-containing protein2.9e-0739.22Show/hide
Query:  MAMIPSIFGDRRSNIFDPFSM----------------------------------------------------KANMDNGVLTVTVPKMEQKKPEIKSID
        M++IPS FGDRRSNIFDPFS+                                                    KA M+NGVLTVTVPK E+KKPE+K+ID
Subjt:  MAMIPSIFGDRRSNIFDPFSM----------------------------------------------------KANMDNGVLTVTVPKMEQKKPEIKSID

Query:  IS
        IS
Subjt:  IS

A0A2G3D1N9 SHSP domain-containing protein2.4e-0638.24Show/hide
Query:  MAMIPSIFGDRRSNIFDPFSM----------------------------------------------------KANMDNGVLTVTVPKMEQKKPEIKSID
        M++IPS FGDRRSNIFDPFS+                                                    KA M+N VLTVTVPK E+KKPE+K+ID
Subjt:  MAMIPSIFGDRRSNIFDPFSM----------------------------------------------------KANMDNGVLTVTVPKMEQKKPEIKSID

Query:  IS
        IS
Subjt:  IS

A0A2I0HX20 SHSP domain-containing protein3.4e-0841.76Show/hide
Query:  MAMIPSIFGDRRSNIFDPFSM----------------------------------------KANMDNGVLTVTVPKMEQKKPEIKSIDISG
        M++IPS FG RRSN+FDPFS+                                        KA+M+NGVLTVTVPK+E+KKPE+K+I+ISG
Subjt:  MAMIPSIFGDRRSNIFDPFSM----------------------------------------KANMDNGVLTVTVPKMEQKKPEIKSIDISG

A0A5D3BEM2 18.1 kDa class I heat shock protein-like7.0e-0687.1Show/hide
Query:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG
        +KANM+NGVLTVTVPKME+KKPEIKSIDI+G
Subjt:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG

SwissProt top hitse value%identityAlignment
P13853 17.6 kDa class I heat shock protein 31.8e-0674.19Show/hide
Query:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG
        +KA+M+NGVL+VTVPK+ +KKPE+KSIDISG
Subjt:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG

P27397 18.0 kDa class I heat shock protein1.8e-0677.42Show/hide
Query:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG
        +KA M+NGVLTVTVPK+E KKPE+KSI ISG
Subjt:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG

P30221 17.8 kDa class I heat shock protein2.3e-0677.42Show/hide
Query:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG
        +KA+M+NGVLTVTVPK E KKPE+KSI+ISG
Subjt:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG

Q84J50 17.7 kDa class I heat shock protein2.3e-0670.59Show/hide
Query:  PFSMKANMDNGVLTVTVPKMEQKKPEIKSIDISG
        P  +KA+M+NGVLTVTVPK E KKP++KSI ISG
Subjt:  PFSMKANMDNGVLTVTVPKMEQKKPEIKSIDISG

Q84Q77 17.9 kDa class I heat shock protein2.3e-0670.59Show/hide
Query:  PFSMKANMDNGVLTVTVPKMEQKKPEIKSIDISG
        P  +KA+M+NGVLTVTVPK E KKP++KSI ISG
Subjt:  PFSMKANMDNGVLTVTVPKMEQKKPEIKSIDISG

Arabidopsis top hitse value%identityAlignment
AT1G07400.1 HSP20-like chaperones superfamily protein5.3e-0669.7Show/hide
Query:  MKANMDNGVLTVTVPKMEQ--KKPEIKSIDISG
        +KA+M+NGVLTVTVPK+E+  KK ++KSIDISG
Subjt:  MKANMDNGVLTVTVPKMEQ--KKPEIKSIDISG

AT1G53540.1 HSP20-like chaperones superfamily protein1.3e-0774.19Show/hide
Query:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG
        +KA+M+NGVL+VTVPK+ +KKPE+KSIDISG
Subjt:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG

AT1G53540.1 HSP20-like chaperones superfamily protein1.1e-0371.43Show/hide
Query:  MAMIPSIFGDRRSNIFDPFSM
        M++IPSIFG RR+N+FDPFS+
Subjt:  MAMIPSIFGDRRSNIFDPFSM

AT1G59860.1 HSP20-like chaperones superfamily protein6.9e-0669.7Show/hide
Query:  MKANMDNGVLTVTVPKME--QKKPEIKSIDISG
        +KA+M+NGVLTVTVPK+E  +KK ++KSIDISG
Subjt:  MKANMDNGVLTVTVPKME--QKKPEIKSIDISG

AT3G46230.1 heat shock protein 17.42.8e-0767.74Show/hide
Query:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG
        +KA+M+NGVL+VTVPK+++ KPE+KS+DISG
Subjt:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG

AT5G59720.1 heat shock protein 18.28.2e-0770.97Show/hide
Query:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG
        +KA M+NGVLTV VPK  +KKP++KSIDISG
Subjt:  MKANMDNGVLTVTVPKMEQKKPEIKSIDISG

AT5G59720.1 heat shock protein 18.28.5e-0480Show/hide
Query:  MAMIPSIFGDRRSNIFDPFS
        M++IPSIFG RRSN+FDPFS
Subjt:  MAMIPSIFGDRRSNIFDPFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGATTCCAAGCATTTTCGGTGATCGAAGAAGCAACATCTTCGACCCATTTTCAATGAAGGCCAATATGGACAATGGAGTGCTCACTGTCACTGTGCCTAAGAT
GGAACAGAAGAAGCCTGAAATCAAATCTATTGACATCTCTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGATTCCAAGCATTTTCGGTGATCGAAGAAGCAACATCTTCGACCCATTTTCAATGAAGGCCAATATGGACAATGGAGTGCTCACTGTCACTGTGCCTAAGAT
GGAACAGAAGAAGCCTGAAATCAAATCTATTGACATCTCTGGTTGAATTTAAGGCATTGTTTGTGGGTTCTGCCATTTGGGTTCTCATGCTCTTGTGTCATTGTGTGCAA
CCTTTTTGAAGTTTAAACAGTTTGGTGTTGTGTTATGTGTACTTTGCTTATATGATATTATGATGGGATGATGAATAAAATGATGAGTTTTTTATGGTTTAGTGATCACA
ACATTTCTACAACACTGAACCTTTTTGTTGTTGTTGGCTTGGCTAAGCATGGATTTTGAACTTGTGGAAG
Protein sequenceShow/hide protein sequence
MAMIPSIFGDRRSNIFDPFSMKANMDNGVLTVTVPKMEQKKPEIKSIDISG