; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004611 (gene) of Chayote v1 genome

Gene IDSed0004611
OrganismSechium edule (Chayote v1)
DescriptionCHCH domain-containing protein
Genome locationLG04:1369209..1371699
RNA-Seq ExpressionSed0004611
SyntenySed0004611
Gene Ontology termsGO:0007005 - mitochondrion organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585350.1 hypothetical protein SDJN03_18083, partial [Cucurbita argyrosperma subsp. sororia]5.2e-6188.81Show/hide
Query:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGPE
        MPRRSSGGRSASRPAPRAP+RNPP P HSAP PAPVQ GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVD+VMGPRVIQHE VDSSSS   +ANN GG E
Subjt:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGPE

Query:  ACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA
         CTVQSK+FEDCLNHYG+DIGKCQFYLDMLKECRRGSGSVLGA
Subjt:  ACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA

KAG7020260.1 hypothetical protein SDJN02_16943, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-6088.11Show/hide
Query:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGPE
        MPRRSSGGRSASRPAPRAP+RNPP P HSAP PAPVQ GGGGSMLGGLGATIA+GLAFGTGSAVAHRAVD+VMGPRVIQHE VDSSSS   +ANN GG E
Subjt:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGPE

Query:  ACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA
         CTVQSK+FEDCLNHYG+DIGKCQFYLDMLKECRRGSGSVLGA
Subjt:  ACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA

XP_023001881.1 uncharacterized protein C6C3.02c-like [Cucurbita maxima]1.6e-6290.21Show/hide
Query:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGPE
        MPRRSSGGRSASRPAPRAP+RNPP P HSAPPPAPVQ GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVD+VMGPRVIQHE VDSSSSA  +ANN GG E
Subjt:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGPE

Query:  ACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA
         CTVQSK+FEDCLNHYG+DIGKCQFYLDMLKECRRGSGSVLGA
Subjt:  ACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA

XP_023537001.1 uncharacterized protein C6C3.02c-like isoform X1 [Cucurbita pepo subsp. pepo]1.2e-6088.81Show/hide
Query:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGPE
        MPRRSSGGRSASRPAPRAP+RNPP P HSAP PAPVQ GGGGSMLG LGATIAQGLAFGTGSAVAHRAVD+VMGPRVIQHETVDSSSS   +ANN GG E
Subjt:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGPE

Query:  ACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA
         CTVQSK+FEDCLNHYG+DIGKCQFYLDMLKECRRGSGSVLGA
Subjt:  ACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA

XP_038886373.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Benincasa hispida]8.9e-6188.89Show/hide
Query:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSS-SSAPSVANNSGGP
        MPRRSSGGRSASRPAPRAP+RNPPAP  SAPPPAPVQ GGGGSMLGGLGATIAQG+AFGTGSAVAHRAVD+VMGPR IQHET+DSS SSAPSVANN GG 
Subjt:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSS-SSAPSVANNSGGP

Query:  EACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA
        +ACTVQSKSF+DCLNHYGSDI KCQFYLDML+ECRR SGSVLGA
Subjt:  EACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA

TrEMBL top hitse value%identityAlignment
A0A0A0LNY2 CHCH domain-containing protein4.7e-6088.19Show/hide
Query:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSS-SSAPSVANNSGGP
        MPRRSSGGRSASRPAPRAP+RNPPAP   APPPAPVQ GGGGSMLGGLGATIAQG+AFGTGSAVAHRAVD+VMGPR IQHETVDSS SSAPSVA+NSGG 
Subjt:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSS-SSAPSVANNSGGP

Query:  EACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA
        +AC VQSKSF+DCLNHYGSDI KCQFYLDML+ECRR SGSVLGA
Subjt:  EACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA

A0A1S3BAZ1 uncharacterized protein C6C3.02c-like6.2e-6088.19Show/hide
Query:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSS-SSAPSVANNSGGP
        MPRRSSGGRSA RPA RAP RNPPAPV+SAPPPAPVQ GGGGSMLGGLGATIAQG+AFGTGSAVAHRAVD+VMGPR IQHET+DSS SSAPSVANNSGG 
Subjt:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSS-SSAPSVANNSGGP

Query:  EACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA
        +AC VQSKSF+DCLNHYGSDI KCQFYLDML+ECRR SGSVLGA
Subjt:  EACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA

A0A6J1GHD7 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like1.6e-6088.11Show/hide
Query:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGPE
        MPRRSSGGRSASRPAPRAP+RNPP P HSAP PAPVQ GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVD+VMGPRVIQHE VDSSSS   +ANN GG  
Subjt:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGPE

Query:  ACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA
         CTVQSK+FEDCLNHYG+DIGKCQFYLDMLKECRRGSGSVLGA
Subjt:  ACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA

A0A6J1HDK4 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial1.1e-5987.59Show/hide
Query:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSS--SSAPSVANNSGG
        MPRRSSGGRSASRPAPRAP RN PAP HSAPPPAPVQ GGGGSMLGGLGATIAQG+AFGTGSAVAHRAVD+VMGPRVIQHETVDSS  SSAPSVA+N GG
Subjt:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSS--SSAPSVANNSGG

Query:  PEACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA
         +AC VQSKSF+DCLNHYGSDI KCQFYLDML+ECR+ SGSVLGA
Subjt:  PEACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA

A0A6J1KJW6 uncharacterized protein C6C3.02c-like7.8e-6390.21Show/hide
Query:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGPE
        MPRRSSGGRSASRPAPRAP+RNPP P HSAPPPAPVQ GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVD+VMGPRVIQHE VDSSSSA  +ANN GG E
Subjt:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGPE

Query:  ACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA
         CTVQSK+FEDCLNHYG+DIGKCQFYLDMLKECRRGSGSVLGA
Subjt:  ACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09570.1 Cox19-like CHCH family protein2.8e-3658.33Show/hide
Query:  MPRRSSGGRSASRPA-PRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGP
        MPR SSGGRS+ RP+ P A    PP  V+ APPPA  Q   GGS LG +GA+I +GLA+GTG+A  HR VDSVMGPR  +HETV   S  PS AN     
Subjt:  MPRRSSGGRSASRPA-PRAPMRNPPAPVHSAPPPAPVQ-GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGP

Query:  EACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA
         AC + SK+F+DC+NH+GSDI KCQFY+DML EC++ SGSV+ A
Subjt:  EACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA

AT5G64400.1 CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625)1.0e-4362.5Show/hide
Query:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ--GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGP
        M RRSSGGRSA RP P A     P PVH APPPAP Q  GGGG M  G+G+TIAQG+AFGTGSAVAHRAVDSVMGPR IQHE V+++S++ + A ++   
Subjt:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ--GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGP

Query:  EACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA
          C + +K+F+DC+  YGS+I KCQFY+DML ECR+ SGSV+GA
Subjt:  EACTVQSKSFEDCLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA

AT5G64400.2 BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1)8.1e-2860.71Show/hide
Query:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ--GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGP
        M RRSSGGRSA RP P A     P PVH APPPAP Q  GGGG M  G+G+TIAQG+AFGTGSAVAHRAVDSVMGPR IQHE V+++S++ + A ++   
Subjt:  MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQ--GGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGP

Query:  EACTVQSKSFED
          C + +K+F+D
Subjt:  EACTVQSKSFED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGTCGGAGCTCCGGTGGTCGATCTGCTTCTCGTCCCGCCCCACGCGCTCCAATGCGCAACCCTCCAGCGCCCGTTCATTCTGCTCCTCCACCTGCACCTGTACA
AGGTGGTGGTGGGTCTATGCTGGGAGGACTTGGTGCCACTATTGCTCAAGGTTTGGCCTTTGGTACTGGAAGTGCGGTGGCTCACAGGGCTGTTGATTCTGTAATGGGCC
CTCGGGTCATCCAACACGAGACTGTTGATTCATCTTCTTCAGCACCTTCTGTAGCGAACAATTCTGGAGGTCCCGAAGCTTGTACTGTTCAATCAAAGTCCTTTGAAGAT
TGCCTGAACCACTATGGAAGTGACATTGGGAAGTGCCAGTTCTACTTGGATATGTTGAAGGAATGTCGCAGGGGCTCAGGTTCTGTTTTGGGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
GAAAAAAATAAAGAAAATCCCAAAGCCCAATTACCAGGCTCGATATATAAACAGGCTAGAAAAAAGAAACCCCACGAAAACCAGTGACCCTGAAGCGCAGATCTCATTCG
CCGCCACCGCCATTTCGTTTCTTCTCCTTATCGCCGTCGCCTTCTCTCATCGCCCGTAATCATGCCTCGTCGGAGCTCCGGTGGTCGATCTGCTTCTCGTCCCGCCCCAC
GCGCTCCAATGCGCAACCCTCCAGCGCCCGTTCATTCTGCTCCTCCACCTGCACCTGTACAAGGTGGTGGTGGGTCTATGCTGGGAGGACTTGGTGCCACTATTGCTCAA
GGTTTGGCCTTTGGTACTGGAAGTGCGGTGGCTCACAGGGCTGTTGATTCTGTAATGGGCCCTCGGGTCATCCAACACGAGACTGTTGATTCATCTTCTTCAGCACCTTC
TGTAGCGAACAATTCTGGAGGTCCCGAAGCTTGTACTGTTCAATCAAAGTCCTTTGAAGATTGCCTGAACCACTATGGAAGTGACATTGGGAAGTGCCAGTTCTACTTGG
ATATGTTGAAGGAATGTCGCAGGGGCTCAGGTTCTGTTTTGGGTGCTTAAAAGAAATTGATTTTTAGAACAATTATATTATGTGTTGAAGGAATGTTGCAGTGAGCTGTG
TCAAGATTGTGGCTTTTGTTGCTCCAATGTTTTCATTTTATGAGAACTTCTATAACTTCAATAAAAAGGTGTTCGATGATGAAACACTTCACCGTTTGGACTCCAATTGT
TTGGTTCAGTAAACAGCATTCAAACAAACTTTTTACTATAAATCCCAATTTTTTGCTATCTAAATATGTCAAACAGACACCCCTAAAATTTGGAGTATCTGAGAGGCTAT
GAGTTTAATCATAGATAAGTGAACA
Protein sequenceShow/hide protein sequence
MPRRSSGGRSASRPAPRAPMRNPPAPVHSAPPPAPVQGGGGSMLGGLGATIAQGLAFGTGSAVAHRAVDSVMGPRVIQHETVDSSSSAPSVANNSGGPEACTVQSKSFED
CLNHYGSDIGKCQFYLDMLKECRRGSGSVLGA