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Sed0004645 (gene) of Chayote v1 genome

Gene IDSed0004645
OrganismSechium edule (Chayote v1)
Descriptionprotein LITTLE ZIPPER 1-like
Genome locationLG01:68615204..68616383
RNA-Seq ExpressionSed0004645
SyntenySed0004645
Gene Ontology termsNA
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579456.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3485.57Show/hide
Query:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQRK
        MCI AT+SILFHQI TSKN+ R KRSKLQV RLTRRR CEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEFQK+FPHL+QRK
Subjt:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQRK
KAG7036101.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-3687.76Show/hide
Query:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRL-TRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQRK
        MCI+AT+ ILFHQIHTSKNR RLKRSKLQVQRL +RRRS EEK GKDIELKNLQLYL+NQTIIEENEKLREKANILHQENLALMTEF K+FPH DQRK
Subjt:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRL-TRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQRK
XP_022159679.1 protein LITTLE ZIPPER 2-like isoform X1 [Momordica charantia]7.5e-3587.37Show/hide
Query:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQ
        MCISATES  FHQIHTSKNR RLKRSKLQVQRLTRRR  EEK+GKDIELKNLQLYL+NQTIIEENEKLRE+ANILHQENLALMTE QK+F HLD+
Subjt:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQ
XP_022922429.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]2.0e-3587.63Show/hide
Query:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQRK
        MCISAT+SILFHQI TSKNR R KRSKLQV RLTRRR CEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEFQK+FPHL+QRK
Subjt:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQRK
XP_023534553.1 protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]3.6e-3788.66Show/hide
Query:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQRK
        MCI+AT+ ILFHQIHTSKNR RLKRSKLQVQRL+RRRS EEK GKDIELKNLQLYL+NQTIIEENEKLREKANILHQENLALMTEF K+FPH DQRK
Subjt:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQRK
TrEMBL top hitse value%identityAlignment
A0A0A0KKF8 Uncharacterized protein1.5e-3382.47Show/hide
Query:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQRK
        MC+SAT+S+LFH I +SKNR   KRS  QV RLTRRR CEEKLGKDIELKNLQLYL+NQTIIEENEKLREKANILHQENLAL+TEFQK+FPHL+QRK
Subjt:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQRK
A0A6J1DZF5 protein LITTLE ZIPPER 2-like isoform X23.1e-3486.46Show/hide
Query:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSC-EEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQ
        MCISATES  FHQIHTSKNR RLKRSKLQVQRLT RR C EEK+GKDIELKNLQLYL+NQTIIEENEKLRE+ANILHQENLALMTE QK+F HLD+
Subjt:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSC-EEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQ
A0A6J1E319 protein LITTLE ZIPPER 2-like isoform X13.6e-3587.37Show/hide
Query:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQ
        MCISATES  FHQIHTSKNR RLKRSKLQVQRLTRRR  EEK+GKDIELKNLQLYL+NQTIIEENEKLRE+ANILHQENLALMTE QK+F HLD+
Subjt:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQ
A0A6J1E3C5 protein LITTLE ZIPPER 1-like9.5e-3687.63Show/hide
Query:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQRK
        MCISAT+SILFHQI TSKNR R KRSKLQV RLTRRR CEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEFQK+FPHL+QRK
Subjt:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQRK
A0A7J0FTG6 Uncharacterized protein3.5e-2264.58Show/hide
Query:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRR-RSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQ
        MCI ATE I    +     + R KRSK++VQRL RR R CEEK+GKD+ELKNL+LY +N TI+EENEKLR+KA++LHQENLALMTEFQK+F H D+
Subjt:  MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRR-RSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQ
SwissProt top hitse value%identityAlignment
F4IG60 Protein LITTLE ZIPPER 12.0e-0640.43Show/hide
Query:  MCISATESILFHQIHTSKNRTRL-----KRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKR
        MC+S++E+        S   TRL      +S +++ RL+RRR    +  K +E+ NL+LY++NQ II ENEKL++KA +LHQEN  L +  Q +
Subjt:  MCISATESILFHQIHTSKNRTRL-----KRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKR
Q9LZX5 Protein LITTLE ZIPPER 22.6e-0640.96Show/hide
Query:  SILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRF
        S  +H  H SK +T L+     +  LTRRR    K  K++E++NL+L+++NQ+II ENE L++KA +LH EN AL      ++
Subjt:  SILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRF
Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding1.4e-0740.43Show/hide
Query:  MCISATESILFHQIHTSKNRTRL-----KRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKR
        MC+S++E+        S   TRL      +S +++ RL+RRR    +  K +E+ NL+LY++NQ II ENEKL++KA +LHQEN  L +  Q +
Subjt:  MCISATESILFHQIHTSKNRTRL-----KRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKR
AT3G60890.1 protein binding1.8e-0740.96Show/hide
Query:  SILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRF
        S  +H  H SK +T L+     +  LTRRR    K  K++E++NL+L+++NQ+II ENE L++KA +LH EN AL      ++
Subjt:  SILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRF
AT3G60890.2 protein binding1.8e-0739.76Show/hide
Query:  SILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRF
        S  +H  H SK +T L+     +  LT RR    K  K++E++NL+L+++NQ+II ENE L++KA +LH EN AL      ++
Subjt:  SILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCATCAGTGCAACAGAGAGCATTCTGTTTCATCAAATTCATACTTCCAAGAACAGAACACGTTTAAAAAGATCCAAACTTCAAGTTCAGAGGCTTACCAGGAGGAG
ATCATGTGAAGAGAAGCTGGGGAAGGATATTGAGCTGAAGAACTTGCAGCTTTATTTGCAGAATCAGACCATAATTGAAGAGAATGAGAAGCTGAGAGAGAAAGCTAATA
TCCTTCATCAAGAGAACTTGGCTTTAATGACTGAGTTTCAGAAAAGATTCCCACATCTGGATCAGAGAAAATGA
mRNA sequenceShow/hide mRNA sequence
CCACAATGTGCTTTCTCTTACCTCTCTTTCTCCATCTATATAAGTTTGAGCTTTAGAACAACAGATTCCCCTGCAACTTCCATACATTCTCTCTGCTACAAAGATAGCCA
AAAGTTAAGAAGCTGCATAAAAGAACAATGTGCATCAGTGCAACAGAGAGCATTCTGTTTCATCAAATTCATACTTCCAAGAACAGAACACGTTTAAAAAGATCCAAACT
TCAAGTTCAGAGGCTTACCAGGAGGAGATCATGTGAAGAGAAGCTGGGGAAGGATATTGAGCTGAAGAACTTGCAGCTTTATTTGCAGAATCAGACCATAATTGAAGAGA
ATGAGAAGCTGAGAGAGAAAGCTAATATCCTTCATCAAGAGAACTTGGCTTTAATGACTGAGTTTCAGAAAAGATTCCCACATCTGGATCAGAGAAAATGATGGGAATCA
TCAGAGGGTGACATGGTTTTATCTCTAGTGAGAAGTTCTGAGTGATTTCTAAATGTATTGAACTCTTTATTCAATATGTATGAACAATTTATCAAGAGTTTACATAAGAT
AATTAAAACCAGAGAGTAATCTAGTTTTTATAGCAGTGAAAGGTGGGGAGTTGATTTTTTTTAAGACCAGTAGTTGTTGAACTTTGTCTGTCTTAAAATAGAACAAGATC
ATAAGAACACAAACTATGGGATAAAACAAG
Protein sequenceShow/hide protein sequence
MCISATESILFHQIHTSKNRTRLKRSKLQVQRLTRRRSCEEKLGKDIELKNLQLYLQNQTIIEENEKLREKANILHQENLALMTEFQKRFPHLDQRK