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Sed0004650 (gene) of Chayote v1 genome

Gene IDSed0004650
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:37520325..37521099
RNA-Seq ExpressionSed0004650
SyntenySed0004650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591970.1 hypothetical protein SDJN03_14316, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3047.83Show/hide
Query:  MSTTKTSIFVGLLVFLCLSLSSANRVLKDSNNVENEATSNVVSSAKD-EVHNIGDAELSSKVVKGSIPEL---GSNIGPLNGEWCSHGGNCGGYVSPPSY
        M+ TK S  VGLL FLCLSLSSANRVLK +N+ E E  +N VSS +D ++ +  +AEL S + +G++P+L   GS  G   G   S GG  GGY  PP+Y
Subjt:  MSTTKTSIFVGLLVFLCLSLSSANRVLKDSNNVENEATSNVVSSAKD-EVHNIGDAELSSKVVKGSIPEL---GSNIGPLNGEWCSHGGNCGGYVSPPSY

Query:  NC------------GGNSGCQPHYSCSPCPWQGCQACQGPPQGCQACQGPPQGCQGGCQEPPHGCQGCLEPPPCGYEAVNENTSKVQ-ESTHVG-EPYPP
                      GG+SGCQP Y+ SPCPWQGC       QGCQ CQG  QGCQGGCQ    GCQ     PPC +E    N SK+Q ES  +G EP PP
Subjt:  NC------------GGNSGCQPHYSCSPCPWQGCQACQGPPQGCQACQGPPQGCQGGCQEPPHGCQGCLEPPPCGYEAVNENTSKVQ-ESTHVG-EPYPP

Query:  SISPAAQPGHDNMKSNG-----EKSNGGLV
         +     P + ++KS+G      KSNGGLV
Subjt:  SISPAAQPGHDNMKSNG-----EKSNGGLV

KAG6607873.1 hypothetical protein SDJN03_01215, partial [Cucurbita argyrosperma subsp. sororia]6.0e-2542.59Show/hide
Query:  FKKMSTTKTSIFVGLLVFLCLSLSSANRVLKDSNNVENEATSNVVSSAKD-EVHNIGDAELSSKVVKGSIPELGSNIGPLNGEWCSHGGNCGGYVSPPSY
        FKKM+ TK SI V LL+ LCLS SSANRVLKD N+ ENE+ +N VS  ++ E+HN   AEL++ V +GSIP+  S       + C+HG + GGYV PP++
Subjt:  FKKMSTTKTSIFVGLLVFLCLSLSSANRVLKDSNNVENEATSNVVSSAKD-EVHNIGDAELSSKVVKGSIPELGSNIGPLNGEWCSHGGNCGGYVSPPSY

Query:  NCGGNSGCQPHYSCSPCPWQGCQACQGPPQGCQACQGPPQGCQGGCQEPPHGCQGCLEPPPCGYEAVNENTSKVQESTHVGEPYPPSISPAAQPGHDNMK
         CG NSGC+P+YSCSPC W                                       PPPCG  AV ++ S VQES    E       PA +P + N+K
Subjt:  NCGGNSGCQPHYSCSPCPWQGCQACQGPPQGCQACQGPPQGCQGGCQEPPHGCQGCLEPPPCGYEAVNENTSKVQESTHVGEPYPPSISPAAQPGHDNMK

Query:  SNG-----EKSNGGLV
         +G      KSNGGLV
Subjt:  SNG-----EKSNGGLV

KGN55137.1 hypothetical protein Csa_012773 [Cucumis sativus]1.1e-2140.18Show/hide
Query:  MSTTKTSIFVGLLVFLCLSLSSANRVLKDSNNVENEATSNVVSSAKDEVHNIGDAELSSKVVKGSIPELGSNIGPLNGEWCSHGGNCGGYVSPPSYNCGG
        M+ T+TS+ VGLL FLCLSL SANR+LK +N+ EN+   + V S K+      + +    +   S+ ++ S+I P+NG+ CS+G NCG Y  PP+  CGG
Subjt:  MSTTKTSIFVGLLVFLCLSLSSANRVLKDSNNVENEATSNVVSSAKDEVHNIGDAELSSKVVKGSIPELGSNIGPLNGEWCSHGGNCGGYVSPPSYNCGG

Query:  NSGCQPHYSCSPCPWQGCQACQGPPQG-----------CQACQGPPQGCQGGCQEPPHGCQGCLEPPPCGYEAVNENTSKVQESTHVGEPYP-PSISPAA
          GC     CS     GC  C G   G           C +CQ   QGC  GCQE    CQGC     CG +A  +++   Q+S   GEP P  +I P A
Subjt:  NSGCQPHYSCSPCPWQGCQACQGPPQG-----------CQACQGPPQGCQGGCQEPPHGCQGCLEPPPCGYEAVNENTSKVQESTHVGEPYP-PSISPAA

Query:  QPGHDNMKSNGE-----KSNGGLV
        +P  +++KS+G      KSNGGLV
Subjt:  QPGHDNMKSNGE-----KSNGGLV

XP_023535133.1 mesenchyme-specific cell surface glycoprotein-like [Cucurbita pepo subsp. pepo]1.4e-3449.35Show/hide
Query:  MSTTKTSIFVGLLVFLCLSLSSANRVLKDSNNVENEATSNVVSSAKD-EVHNIGDAELSSKVVKGSIPEL---GSNIGPLNGEWCSHGGNCGGYVSPPSY
        M+ TK+S  VGLL FLCLSLSSANRVLK +N+ E E  SN VSS +D ++ +  +AEL S + +G++P+L   GS  G   G   S GG  GGY  PP+Y
Subjt:  MSTTKTSIFVGLLVFLCLSLSSANRVLKDSNNVENEATSNVVSSAKD-EVHNIGDAELSSKVVKGSIPEL---GSNIGPLNGEWCSHGGNCGGYVSPPSY

Query:  NC------------GGNSGCQPHYSCSPCPWQGCQACQGPPQGCQACQGPPQGCQGGCQEPPHGCQGCLEP-PPCGYEAVNENTSKVQ-ESTHVG-EPYP
                      GG+SGCQP Y+ SPCPWQGC       QGCQ CQG  QGCQGGCQ    GCQGC  P PPC +E    N SK+Q ES  +G EP P
Subjt:  NC------------GGNSGCQPHYSCSPCPWQGCQACQGPPQGCQACQGPPQGCQGGCQEPPHGCQGCLEP-PPCGYEAVNENTSKVQ-ESTHVG-EPYP

Query:  PSISPAAQPGHDNMKSNG-----EKSNGGLV
        P +     P + ++KS+G      KSNGGLV
Subjt:  PSISPAAQPGHDNMKSNG-----EKSNGGLV

TrEMBL top hitse value%identityAlignment
A0A0A0L3F6 Uncharacterized protein5.1e-2240.18Show/hide
Query:  MSTTKTSIFVGLLVFLCLSLSSANRVLKDSNNVENEATSNVVSSAKDEVHNIGDAELSSKVVKGSIPELGSNIGPLNGEWCSHGGNCGGYVSPPSYNCGG
        M+ T+TS+ VGLL FLCLSL SANR+LK +N+ EN+   + V S K+      + +    +   S+ ++ S+I P+NG+ CS+G NCG Y  PP+  CGG
Subjt:  MSTTKTSIFVGLLVFLCLSLSSANRVLKDSNNVENEATSNVVSSAKDEVHNIGDAELSSKVVKGSIPELGSNIGPLNGEWCSHGGNCGGYVSPPSYNCGG

Query:  NSGCQPHYSCSPCPWQGCQACQGPPQG-----------CQACQGPPQGCQGGCQEPPHGCQGCLEPPPCGYEAVNENTSKVQESTHVGEPYP-PSISPAA
          GC     CS     GC  C G   G           C +CQ   QGC  GCQE    CQGC     CG +A  +++   Q+S   GEP P  +I P A
Subjt:  NSGCQPHYSCSPCPWQGCQACQGPPQG-----------CQACQGPPQGCQGGCQEPPHGCQGCLEPPPCGYEAVNENTSKVQESTHVGEPYP-PSISPAA

Query:  QPGHDNMKSNGE-----KSNGGLV
        +P  +++KS+G      KSNGGLV
Subjt:  QPGHDNMKSNGE-----KSNGGLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCGGACTGTTAGGCGAAATCAACGCCAATGCTAACTTTGCTGCTTTTCCAATCTCTTCACCAAACGCAACAAACTCCCCACCCTATAAAATTTTCAAGAAAAT
GAGTACTACAAAAACTAGCATCTTTGTTGGTCTGTTGGTGTTTCTATGCTTAAGCCTCAGCTCGGCCAATCGAGTTCTCAAAGACAGCAACAATGTCGAAAACGAAGCAA
CAAGTAACGTTGTATCTTCAGCGAAAGACGAAGTGCACAACATCGGTGATGCTGAGCTAAGTAGCAAAGTGGTGAAAGGTAGCATACCAGAGTTGGGTTCCAATATTGGT
CCATTGAATGGTGAATGGTGCAGCCATGGCGGCAATTGTGGAGGCTATGTGTCTCCTCCGAGCTATAATTGTGGCGGAAACTCTGGTTGTCAACCCCATTACAGTTGTTC
TCCGTGTCCGTGGCAGGGATGTCAAGCCTGCCAGGGACCTCCACAGGGATGCCAAGCATGCCAGGGACCTCCCCAGGGATGTCAAGGAGGATGCCAGGAACCTCCACACG
GATGTCAAGGATGCCTGGAACCGCCACCGTGCGGCTATGAAGCCGTAAACGAAAACACCTCTAAAGTCCAAGAATCTACTCATGTGGGTGAACCTTATCCACCTAGCATC
AGTCCAGCAGCCCAACCAGGACATGATAACATGAAATCCAATGGGGAGAAATCGAATGGCGGTCTGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCGGACTGTTAGGCGAAATCAACGCCAATGCTAACTTTGCTGCTTTTCCAATCTCTTCACCAAACGCAACAAACTCCCCACCCTATAAAATTTTCAAGAAAAT
GAGTACTACAAAAACTAGCATCTTTGTTGGTCTGTTGGTGTTTCTATGCTTAAGCCTCAGCTCGGCCAATCGAGTTCTCAAAGACAGCAACAATGTCGAAAACGAAGCAA
CAAGTAACGTTGTATCTTCAGCGAAAGACGAAGTGCACAACATCGGTGATGCTGAGCTAAGTAGCAAAGTGGTGAAAGGTAGCATACCAGAGTTGGGTTCCAATATTGGT
CCATTGAATGGTGAATGGTGCAGCCATGGCGGCAATTGTGGAGGCTATGTGTCTCCTCCGAGCTATAATTGTGGCGGAAACTCTGGTTGTCAACCCCATTACAGTTGTTC
TCCGTGTCCGTGGCAGGGATGTCAAGCCTGCCAGGGACCTCCACAGGGATGCCAAGCATGCCAGGGACCTCCCCAGGGATGTCAAGGAGGATGCCAGGAACCTCCACACG
GATGTCAAGGATGCCTGGAACCGCCACCGTGCGGCTATGAAGCCGTAAACGAAAACACCTCTAAAGTCCAAGAATCTACTCATGTGGGTGAACCTTATCCACCTAGCATC
AGTCCAGCAGCCCAACCAGGACATGATAACATGAAATCCAATGGGGAGAAATCGAATGGCGGTCTGGTTTAG
Protein sequenceShow/hide protein sequence
MASGLLGEINANANFAAFPISSPNATNSPPYKIFKKMSTTKTSIFVGLLVFLCLSLSSANRVLKDSNNVENEATSNVVSSAKDEVHNIGDAELSSKVVKGSIPELGSNIG
PLNGEWCSHGGNCGGYVSPPSYNCGGNSGCQPHYSCSPCPWQGCQACQGPPQGCQACQGPPQGCQGGCQEPPHGCQGCLEPPPCGYEAVNENTSKVQESTHVGEPYPPSI
SPAAQPGHDNMKSNGEKSNGGLV