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Sed0004700 (gene) of Chayote v1 genome

Gene IDSed0004700
OrganismSechium edule (Chayote v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein .
Genome locationLG05:36293698..36293856
RNA-Seq ExpressionSed0004700
SyntenySed0004700
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:1901371 - regulation of leaf morphogenesis (biological process)
GO:1902025 - nitrate import (biological process)
GO:2000280 - regulation of root development (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0005179 - hormone activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8033451.1 hypothetical protein BT93_D2151 [Corymbia citriodora subsp. variegata]7.9e-0770Show/hide
Query:  PPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
        PP +    INRYK  E +AFRPTSPGHSPGVGH+ PPGAP
Subjt:  PPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
KAG6591857.1 Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1077.08Show/hide
Query:  ANRHAIMPPPLVSTL--SINRYKYVEIDAFRPTSPGHSPGVGHDGPPG
        A+ HAI+PP  VSTL  SINRYKYVE DAFRPT+PGHSPGVGH  PPG
Subjt:  ANRHAIMPPPLVSTL--SINRYKYVEIDAFRPTSPGHSPGVGHDGPPG
KAG6608019.1 Precursor of CEP4, partial [Cucurbita argyrosperma subsp. sororia]3.3e-1376.47Show/hide
Query:  MVSVANRHAIMPPPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGA
        +V   NRHAI PP  +ST SINRYKYVE+DAFRPTSPGHSPGVGH  PPGA
Subjt:  MVSVANRHAIMPPPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGA
OAY29952.1 hypothetical protein MANES_15G184800v8 [Manihot esculenta]3.5e-0772.5Show/hide
Query:  PPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
        PP      INRYKY E +AFRPTSPGHSPGVGH  PPGAP
Subjt:  PPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
OMP07954.1 hypothetical protein CCACVL1_01186 [Corchorus capsularis]2.1e-0765.22Show/hide
Query:  RHAIMPPPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
        R AI PP +     INRYK  E DAFRPTSPGHSPGVGH+ PP +P
Subjt:  RHAIMPPPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
TrEMBL top hitse value%identityAlignment
A0A0A0KWX0 Uncharacterized protein1.6e-1074Show/hide
Query:  NRHAIMPPPLVS---TLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
        N HAI PP  VS   + SINRYKYVE DAFRPTSPGHSPGVGH+ PPG P
Subjt:  NRHAIMPPPLVS---TLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
A0A1R3KLK5 Uncharacterized protein1.0e-0765.22Show/hide
Query:  RHAIMPPPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
        R AI PP +     INRYK  E DAFRPTSPGHSPGVGH+ PP +P
Subjt:  RHAIMPPPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
A0A2C9UJ23 Uncharacterized protein1.7e-0772.5Show/hide
Query:  PPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
        PP      INRYKY E +AFRPTSPGHSPGVGH  PPGAP
Subjt:  PPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
A0A2N9H1U7 Uncharacterized protein1.0e-0772.73Show/hide
Query:  IMP-PPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
        IMP PP     +INRYK VE DAFRPTSPGHSPGVGH+ PP AP
Subjt:  IMP-PPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
A0A5N6L638 Uncharacterized protein1.1e-0660.42Show/hide
Query:  SVANRHAIMP-PPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPP
        SVA    + P PP   + S+NRYK +E DAFRPT+PGHSPGVGH  PP
Subjt:  SVANRHAIMP-PPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPP
SwissProt top hitse value%identityAlignment
Q3EBM6 Precursor of CEP47.6e-0565.62Show/hide
Query:  INRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
        INR+K +E DAFRPT  G S G+GH  PPGAP
Subjt:  INRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
Arabidopsis top hitse value%identityAlignment
AT2G35612.1 FUNCTIONS IN: molecular_function unknown5.4e-0665.62Show/hide
Query:  INRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP
        INR+K +E DAFRPT  G S G+GH  PPGAP
Subjt:  INRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGCGTAGCTAATCGCCATGCAATAATGCCTCCTCCTCTAGTGTCGACGCTCTCGATAAACCGATATAAATATGTTGAGATTGACGCTTTTCGACCAACCTCACC
GGGGCACAGCCCCGGGGTTGGCCACGACGGTCCTCCCGGTGCACCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGCGTAGCTAATCGCCATGCAATAATGCCTCCTCCTCTAGTGTCGACGCTCTCGATAAACCGATATAAATATGTTGAGATTGACGCTTTTCGACCAACCTCACC
GGGGCACAGCCCCGGGGTTGGCCACGACGGTCCTCCCGGTGCACCGTAG
Protein sequenceShow/hide protein sequence
MVSVANRHAIMPPPLVSTLSINRYKYVEIDAFRPTSPGHSPGVGHDGPPGAP