; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004708 (gene) of Chayote v1 genome

Gene IDSed0004708
OrganismSechium edule (Chayote v1)
Descriptionclp protease adapter protein ClpF, chloroplastic
Genome locationLG03:41378379..41384967
RNA-Seq ExpressionSed0004708
SyntenySed0004708
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009840 - chloroplastic endopeptidase Clp complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR001943 - UVR domain
IPR011722 - Hemimethylated DNA-binding domain
IPR036623 - Hemimethylated DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064751.1 UvrB/uvrC motif-containing protein isoform 1 [Cucumis melo var. makuwa]1.8e-15785.5Show/hide
Query:  MVQDLSIRALTALGDPKAYGSALSWRKN---FNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIF
        MVQDLSI A+TALGDP  YGSALSWR+N   F  TS TQLTSRQCFW+Q +RS  LT Q CRSKR +FK++AGWLFKGGGQE G R+ERSENANNDILIF
Subjt:  MVQDLSIRALTALGDPKAYGSALSWRKN---FNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVE EIIKQQESK+GLTSKSEVQD+GL +IRLRADLQ AIESENYA+AAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL

Query:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY
        AYES+EYS RLGQKVRHKIFGY GVVCGMDPVCCESSSWMEIAQV KLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL PEEPD +RFDHPY+SFLFY
Subjt:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD
        GVD+AGDFIPIKQLREKY+RPR+E+P DPQD +QQ DD
Subjt:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD

KAG6598627.1 Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.1e-15785.71Show/hide
Query:  MVQDLSIRALTALGDPKAYGSALSWRKNFNLTS-PTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIFFF
        MVQDLSI ALTALGDPK YGS LSWRKNF  TS PT LTSRQ FW+Q +RS  L  Q CRSKR NFKVKAGWLF+GGGQ + AR+ERSENANNDILIFFF
Subjt:  MVQDLSIRALTALGDPKAYGSALSWRKNFNLTS-PTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVEEE+IKQQESKRGLTSKSEVQD+GL +IRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVLAY

Query:  ESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGV
        ES+EYS RLGQK RHKIFGYRGV+CGMDPVCCESSSWMEIAQV KLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLLVPEEPD +RFDHPYNSFLFYGV
Subjt:  ESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGV

Query:  DTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD
        D+AGDFIP+KQLREKY+RPR+EVP DPQD D+Q  D
Subjt:  DTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD

KAG7029563.1 Clp protease adapter protein ClpF, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-15785.71Show/hide
Query:  MVQDLSIRALTALGDPKAYGSALSWRKNFNLTS-PTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIFFF
        MVQDLSI ALTALGDPK YGS LSWRKNF  TS PT LTSRQ FW+Q +RS  L  Q CRSKR NFKVKAGWLF+GGGQ + AR+ERSENANNDILIFFF
Subjt:  MVQDLSIRALTALGDPKAYGSALSWRKNFNLTS-PTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVEEE+IKQQESKRGLTSKSEVQD+GL +IRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVLAY

Query:  ESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGV
        ES+EYS RLGQK RHKIFGYRGV+CGMDPVCCESSSWMEIAQV KLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLLVPEEPD +RFDHPYNSFLFYGV
Subjt:  ESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGV

Query:  DTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD
        D+AGDFIP+KQLREKY+RPR+EVP DPQD D+Q  D
Subjt:  DTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD

XP_008445473.1 PREDICTED: uncharacterized protein LOC103488481 [Cucumis melo]1.4e-15785.8Show/hide
Query:  MVQDLSIRALTALGDPKAYGSALSWRKN---FNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIF
        MVQDLSI A+TALGDP  YGSALSWR+N   F  TS TQLTSRQCFW+Q +RS  LT Q CRSKR +FK++AGWLFKGGGQE G R+ERSENANNDILIF
Subjt:  MVQDLSIRALTALGDPKAYGSALSWRKN---FNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVE EIIKQQESK+GLTSKSEVQD+GL +IRLRADLQ AIESENYA+AAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL

Query:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY
        AYES+EYS RLGQKVRHKIFGY GVVCGMDPVCCESSSWMEIAQV KLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL PEEPD +RFDHPY+SFLFY
Subjt:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD
        GVD+AGDFIPIKQLREKY+RPR+EVP DPQD +QQ DD
Subjt:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD

XP_038886599.1 clp protease adapter protein ClpF, chloroplastic [Benincasa hispida]1.0e-16087.87Show/hide
Query:  MVQDLSIRALTALGDPKAYGSALSWRKN---FNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIF
        MVQDLSI ALTALGDPK YGSALSWR+N   F  TS TQLTSRQCFW Q +RS  LT Q C  KR NFKVKAGWLFKGGGQE+G R+ERSENANNDILIF
Subjt:  MVQDLSIRALTALGDPKAYGSALSWRKN---FNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRTKLTEVE EIIKQQESKRGLTSKSEVQD+GL +IRLRADLQ A+ESENYA+AAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL

Query:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY
        AYES+EYS RLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQV KLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPD + FDHPYNSFLFY
Subjt:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD
        GVDTAGDFIPIKQLREKY+RPRYEVP DPQD +Q+ DD
Subjt:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD

TrEMBL top hitse value%identityAlignment
A0A0A0KD67 YccV-like domain-containing protein2.7e-15484.02Show/hide
Query:  MVQDLSIRALTALGDPKAYGSALSWRKNFNL---TSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIF
        MVQDLSI A+TALGDP  YGSALSWR+NF     TS TQLTSRQCFW+Q +RS  LT Q  RSKR +FK++AGWLFKGGGQE G R+ERSENANNDILIF
Subjt:  MVQDLSIRALTALGDPKAYGSALSWRKNFNL---TSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVE E+IKQQESK+GLTSKSEVQD+GL +IRLRADLQ A+ESENYA+AAQLRDEISKLET+SLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL

Query:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY
        AYES+EYS RLGQKVRHKIFGYRGV+CGMDPVCCESSSWMEIAQV KLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL PEEPD +RFDHPY+SFLFY
Subjt:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD
        GVD+AGDFIPIKQLREKY+RPRYEVP   +D +QQ DD
Subjt:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD

A0A1S3BCC1 uncharacterized protein LOC1034884816.8e-15885.8Show/hide
Query:  MVQDLSIRALTALGDPKAYGSALSWRKN---FNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIF
        MVQDLSI A+TALGDP  YGSALSWR+N   F  TS TQLTSRQCFW+Q +RS  LT Q CRSKR +FK++AGWLFKGGGQE G R+ERSENANNDILIF
Subjt:  MVQDLSIRALTALGDPKAYGSALSWRKN---FNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVE EIIKQQESK+GLTSKSEVQD+GL +IRLRADLQ AIESENYA+AAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL

Query:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY
        AYES+EYS RLGQKVRHKIFGY GVVCGMDPVCCESSSWMEIAQV KLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL PEEPD +RFDHPY+SFLFY
Subjt:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD
        GVD+AGDFIPIKQLREKY+RPR+EVP DPQD +QQ DD
Subjt:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD

A0A5A7VGB7 UvrB/uvrC motif-containing protein isoform 18.9e-15885.5Show/hide
Query:  MVQDLSIRALTALGDPKAYGSALSWRKN---FNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIF
        MVQDLSI A+TALGDP  YGSALSWR+N   F  TS TQLTSRQCFW+Q +RS  LT Q CRSKR +FK++AGWLFKGGGQE G R+ERSENANNDILIF
Subjt:  MVQDLSIRALTALGDPKAYGSALSWRKN---FNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVE EIIKQQESK+GLTSKSEVQD+GL +IRLRADLQ AIESENYA+AAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL

Query:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY
        AYES+EYS RLGQKVRHKIFGY GVVCGMDPVCCESSSWMEIAQV KLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL PEEPD +RFDHPY+SFLFY
Subjt:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD
        GVD+AGDFIPIKQLREKY+RPR+E+P DPQD +QQ DD
Subjt:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD

A0A6J1HFJ3 clp protease adapter protein ClpF, chloroplastic9.8e-15785.42Show/hide
Query:  MVQDLSIRALTALGDPKAYGSALSWRKNFNLTS-PTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIFFF
        MVQDLSI ALTALGDPK YGS LSWRKNF  TS PT LTSRQ FW+Q +RS  L  Q CR KR NFKVKAGWLF+GGGQ + AR+ERSENANNDILIFFF
Subjt:  MVQDLSIRALTALGDPKAYGSALSWRKNFNLTS-PTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVEEE+IKQQESKRGLTSKSEVQD+GL +IRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVLAY

Query:  ESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGV
        ES+EYS RLGQK RHKIFGYRGV+CGMDPVCCESSSWMEIAQV KLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLLVPEEPD +RFDHPYNSFLFYGV
Subjt:  ESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGV

Query:  DTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD
        D+AGDFIP+KQLREKY+RPR+EVP DPQD D+Q  D
Subjt:  DTAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD

A0A6J1KAU5 clp protease adapter protein ClpF, chloroplastic isoform X21.4e-15583.88Show/hide
Query:  MVQDLSIRALTALGDPKAYGSALSWRKNFNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIFFFQ
        MVQDLSI +LT+LGDPK YGS LSWR+NF  TSPT LTSRQ FW+Q +RS  L  Q CRSKR NFKVKAGWLF+GGGQ + AR+ERSENANNDILIFFFQ
Subjt:  MVQDLSIRALTALGDPKAYGSALSWRKNFNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVLAYE
        LDLATRVQYALNIEQYEIAQELRTKLTEVE E+IKQQESKRGLTSKSEVQD+GL +IRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVLAYE
Subjt:  LDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVLAYE

Query:  SSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGVD
        S+EY+ RLGQK +HKIFGYRGV+CGMDPVCCE+SSWMEIAQV KLSRGSNQPFYQVLVDVRT+PDLLVAYVAEENLLVPEEPD +RFDHPYNSFLFYGVD
Subjt:  SSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGVD

Query:  TAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD
        TAGDFIP++QLREKY+RPR+EVP D QD D+Q  D
Subjt:  TAGDFIPIKQLREKYSRPRYEVPSDPQDGDQQDDD

SwissProt top hitse value%identityAlignment
O94952 F-box only protein 211.9e-0833.33Show/hide
Query:  LGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGVDTAGDFIP
        +G  ++HK +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y A+ENL    EP +    HP +   ++   T   +IP
Subjt:  LGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGVDTAGDFIP

Query:  IKQLREKY
          +L  +Y
Subjt:  IKQLREKY

Q5R5S1 F-box only protein 211.9e-0833.33Show/hide
Query:  LGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGVDTAGDFIP
        +G  ++HK +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y A+ENL    EP +    HP +   ++   T   +IP
Subjt:  LGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGVDTAGDFIP

Query:  IKQLREKY
          +L  +Y
Subjt:  IKQLREKY

Q67Y99 Clp protease adapter protein ClpF, chloroplastic2.2e-11365.77Show/hide
Query:  MVQDLSIRALTALGDPKAYGSALSWRKNFNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRS-KRRN-FKVKAGWLFKGGGQE-MGARVERSENANNDILIF
        MVQ  S+  LT  G  K   S+L  R   N    + L   +C   Q +R       H +S K+RN  +V+A W F+GGG++ +    ERSE+AN DILIF
Subjt:  MVQDLSIRALTALGDPKAYGSALSWRKNFNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRS-KRRN-FKVKAGWLFKGGGQE-MGARVERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVEEE I+ QE KRG ++KSE QD+G+++IRLRADLQNAI+SE+Y +AA+LRDEISKLE ESLA SAK L
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL

Query:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY
        A+E +EY+ RLGQK+RHK FGYR VVCGMDP+C ESSSWME A+V KL RGSNQPFYQVLVDVRT PDLLVAYVAE+NLL PE+PDK+RFDHPY SFL+Y
Subjt:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGD
        G DTAGDFIP+KQLREKY+RPR+EVP D QD D
Subjt:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGD

Q8VDH1 F-box only protein 211.5e-0833.33Show/hide
Query:  LGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGVDTAGDFIP
        +G  ++HK +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y A+ENL    EP +    HP +   ++   T   +IP
Subjt:  LGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGVDTAGDFIP

Query:  IKQLREKY
          +L  +Y
Subjt:  IKQLREKY

Arabidopsis top hitse value%identityAlignment
AT2G03390.1 uvrB/uvrC motif-containing protein1.6e-11465.77Show/hide
Query:  MVQDLSIRALTALGDPKAYGSALSWRKNFNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRS-KRRN-FKVKAGWLFKGGGQE-MGARVERSENANNDILIF
        MVQ  S+  LT  G  K   S+L  R   N    + L   +C   Q +R       H +S K+RN  +V+A W F+GGG++ +    ERSE+AN DILIF
Subjt:  MVQDLSIRALTALGDPKAYGSALSWRKNFNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRS-KRRN-FKVKAGWLFKGGGQE-MGARVERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVEEE I+ QE KRG ++KSE QD+G+++IRLRADLQNAI+SE+Y +AA+LRDEISKLE ESLA SAK L
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVL

Query:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY
        A+E +EY+ RLGQK+RHK FGYR VVCGMDP+C ESSSWME A+V KL RGSNQPFYQVLVDVRT PDLLVAYVAE+NLL PE+PDK+RFDHPY SFL+Y
Subjt:  AYESSEYSLRLGQKVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGD
        G DTAGDFIP+KQLREKY+RPR+EVP D QD D
Subjt:  GVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGD

AT2G03390.2 uvrB/uvrC motif-containing protein2.0e-9375.91Show/hide
Query:  LNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVLAYESSEYSLRLGQ
        +N+EQY+IAQ+LR KLTEVEEE I+ QE KRG ++KSE QD+G+++IRLRADLQNAI+SE+Y +AA+LRDEISKLE ESLA SAK LA+E +EY+ RLGQ
Subjt:  LNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVLAYESSEYSLRLGQ

Query:  KVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGVDTAGDFIPIKQ
        K+RHK FGYR VVCGMDP+C ESSSWME A+V KL RGSNQPFYQVLVDVRT PDLLVAYVAE+NLL PE+PDK+RFDHPY SFL+YG DTAGDFIP+KQ
Subjt:  KVRHKIFGYRGVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGVDTAGDFIPIKQ

Query:  LREKYSRPRYEVPSDPQDGD
        LREKY+RPR+EVP D QD D
Subjt:  LREKYSRPRYEVPSDPQDGD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGGATTTGTCAATACGCGCTCTGACAGCCTTGGGAGATCCTAAGGCTTATGGATCAGCACTTTCATGGAGGAAGAATTTCAATCTGACAAGTCCTACCCAATT
AACTTCCAGGCAATGCTTTTGGAATCAAGGGATACGAAGCTTATTCTTAACCATACAACACTGTAGATCGAAACGAAGAAATTTTAAGGTTAAAGCTGGATGGTTGTTCA
AAGGGGGTGGACAAGAGATGGGTGCTCGTGTTGAGCGCAGTGAGAATGCGAACAATGATATTTTAATTTTCTTTTTCCAATTGGACCTGGCAACACGAGTACAGTATGCA
TTGAACATTGAGCAGTATGAAATTGCACAAGAATTGAGAACGAAGCTAACTGAGGTTGAAGAAGAAATCATCAAGCAGCAAGAATCGAAAAGGGGGTTAACTTCAAAGAG
TGAAGTTCAAGATCAAGGTTTAGCTATGATTCGTCTACGTGCAGATTTGCAGAATGCTATTGAAAGTGAGAATTATGCTATGGCTGCACAACTGCGGGATGAAATTTCCA
AACTTGAAACTGAGTCCCTAGCTGCATCTGCGAAAGTTCTCGCTTACGAAAGTTCTGAATATAGTTTGAGATTGGGGCAGAAAGTGAGGCACAAAATTTTTGGATACAGA
GGTGTAGTTTGTGGAATGGATCCCGTGTGTTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGGAAAATTGTCTCGAGGTTCTAATCAGCCATTTTATCAGGTTTT
AGTAGATGTTCGTACAGACCCTGATTTGCTGGTTGCATACGTTGCCGAGGAAAATCTTCTTGTTCCCGAAGAGCCAGACAAGGACAGGTTTGATCATCCGTATAATTCCT
TCTTATTCTATGGAGTGGATACGGCCGGGGATTTCATTCCTATAAAGCAACTACGGGAGAAGTATAGTCGGCCTCGATATGAAGTCCCCTCTGATCCTCAAGATGGCGAT
CAACAGGATGATGATTGA
mRNA sequenceShow/hide mRNA sequence
TAACGTGATAACGAGGCTATTCCACCGCCTGAAACTCAAATTTGCGGCTGTGGTGCGATGCGAAACCAAAAACAGTGCTTCTCCGGCAGCTCTCAGATGCAAGGATCTTC
TATTGAGAGGTAGAGGAAGAAGTGTACAATTTTCTTCTGTAATCAAGGAACAGTATCTCGTGTTTAGCAGAAATGGTGCAGGATTTGTCAATACGCGCTCTGACAGCCTT
GGGAGATCCTAAGGCTTATGGATCAGCACTTTCATGGAGGAAGAATTTCAATCTGACAAGTCCTACCCAATTAACTTCCAGGCAATGCTTTTGGAATCAAGGGATACGAA
GCTTATTCTTAACCATACAACACTGTAGATCGAAACGAAGAAATTTTAAGGTTAAAGCTGGATGGTTGTTCAAAGGGGGTGGACAAGAGATGGGTGCTCGTGTTGAGCGC
AGTGAGAATGCGAACAATGATATTTTAATTTTCTTTTTCCAATTGGACCTGGCAACACGAGTACAGTATGCATTGAACATTGAGCAGTATGAAATTGCACAAGAATTGAG
AACGAAGCTAACTGAGGTTGAAGAAGAAATCATCAAGCAGCAAGAATCGAAAAGGGGGTTAACTTCAAAGAGTGAAGTTCAAGATCAAGGTTTAGCTATGATTCGTCTAC
GTGCAGATTTGCAGAATGCTATTGAAAGTGAGAATTATGCTATGGCTGCACAACTGCGGGATGAAATTTCCAAACTTGAAACTGAGTCCCTAGCTGCATCTGCGAAAGTT
CTCGCTTACGAAAGTTCTGAATATAGTTTGAGATTGGGGCAGAAAGTGAGGCACAAAATTTTTGGATACAGAGGTGTAGTTTGTGGAATGGATCCCGTGTGTTGTGAATC
AAGTTCCTGGATGGAGATAGCACAAGTTGGAAAATTGTCTCGAGGTTCTAATCAGCCATTTTATCAGGTTTTAGTAGATGTTCGTACAGACCCTGATTTGCTGGTTGCAT
ACGTTGCCGAGGAAAATCTTCTTGTTCCCGAAGAGCCAGACAAGGACAGGTTTGATCATCCGTATAATTCCTTCTTATTCTATGGAGTGGATACGGCCGGGGATTTCATT
CCTATAAAGCAACTACGGGAGAAGTATAGTCGGCCTCGATATGAAGTCCCCTCTGATCCTCAAGATGGCGATCAACAGGATGATGATTGATCGACGCACATCTTTCGAAA
TCCGTAATGCGTTAAGAAATGGTTTGTTTATCTTCTTTCTTCAATTCCTCCTTTAATTCTTCTCTTGTGTGGTAAGGTTTCCACATTCATCGAGTTTCAGGAGATTTGAT
GAGACTTGAATGTAGAAAATTCTGAATCAGTCCTGTACATGATATATGCACAGCACAGCATTTCTTCTCGTCGCATTGATACTGAATTTCAGAAGTGTTATTTACTTGAA
CGATAGAGTATAAATAAGAATTAATCAACTGCCTTAATAGTAATATATGTTGTAGTTCTTATTTGGTTACTTCACTTTCATTCGAAGTTACTGTTTTTTCAAAATAGTGG
AATTCAGAAGTATGGCCCGA
Protein sequenceShow/hide protein sequence
MVQDLSIRALTALGDPKAYGSALSWRKNFNLTSPTQLTSRQCFWNQGIRSLFLTIQHCRSKRRNFKVKAGWLFKGGGQEMGARVERSENANNDILIFFFQLDLATRVQYA
LNIEQYEIAQELRTKLTEVEEEIIKQQESKRGLTSKSEVQDQGLAMIRLRADLQNAIESENYAMAAQLRDEISKLETESLAASAKVLAYESSEYSLRLGQKVRHKIFGYR
GVVCGMDPVCCESSSWMEIAQVGKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDKDRFDHPYNSFLFYGVDTAGDFIPIKQLREKYSRPRYEVPSDPQDGD
QQDDD