; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004718 (gene) of Chayote v1 genome

Gene IDSed0004718
OrganismSechium edule (Chayote v1)
Descriptionincreased DNA methylation 3-like
Genome locationLG08:33234247..33238560
RNA-Seq ExpressionSed0004718
SyntenySed0004718
Gene Ontology termsGO:1901537 - positive regulation of DNA demethylation (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR039321 - Increased DNA methylation 2/3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144249.1 increased DNA methylation 3 [Cucumis sativus]2.2e-6790.97Show/hide
Query:  VEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFT
        +EG+ D T LKPSVILTGTAKEGSSGPP+GLVDIGVS+GAYLFRVALPGVRKD+SKVKFEIKSDGKVQIEGVM+GPG LK+SSAMYQMKVQQLCPPGPFT
Subjt:  VEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPL

XP_008464812.1 PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo]2.2e-6790.97Show/hide
Query:  VEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFT
        +EG+ D T LKPSVILTGTAKEGSSGPP+GLVDIGVS+GAYLFRVALPGVRKD+SKVKFEIKSDGKVQIEGVM+GPG LK+SSAMYQMKVQQLCPPGPFT
Subjt:  VEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPL

XP_022951227.1 increased DNA methylation 3-like [Cucurbita moschata]2.8e-7093.1Show/hide
Query:  MDVEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGP
        M +EGH DH KLKPSVILTGTAKEGSSGPP+GLVDIGVS+GAYLFRVALPGVRKD+SKVKFEIKSDG+V IEGVMTGPGLLKDSSAMYQMKVQQLCPPG 
Subjt:  MDVEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGP

Query:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP
        FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP
Subjt:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP

XP_023002579.1 increased DNA methylation 3-like [Cucurbita maxima]5.3e-6992.41Show/hide
Query:  MDVEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGP
        M +EGH DH KLKPSVILTGTAKEGSSGPP+GLVDIGVS+GAYLFRVALPGVRKD+SKVKFEIKSDG+V IEGVMTGPGLLKDSSAMYQMKVQQLCPPG 
Subjt:  MDVEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGP

Query:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP
        FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADS PP
Subjt:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP

XP_038884247.1 increased DNA methylation 3 [Benincasa hispida]4.5e-6891.67Show/hide
Query:  VEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFT
        +EGH D T  KPSVILTGTAKEGSSGPP+GLVDIGVS+GAYLFRVALPGVRKD+SKVKFEIKSDGKVQIEGVMTGPG+LK+SSAMYQMKVQQLCPPGPFT
Subjt:  VEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPL
        VSFKLPGPVDPRLS PSFRPDGILEVVVMKSRA PTVADSHPPL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPL

TrEMBL top hitse value%identityAlignment
A0A0A0KDF2 SHSP domain-containing protein1.1e-6790.97Show/hide
Query:  VEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFT
        +EG+ D T LKPSVILTGTAKEGSSGPP+GLVDIGVS+GAYLFRVALPGVRKD+SKVKFEIKSDGKVQIEGVM+GPG LK+SSAMYQMKVQQLCPPGPFT
Subjt:  VEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPL

A0A1S3CMV5 increased DNA methylation 3 isoform X21.1e-6790.97Show/hide
Query:  VEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFT
        +EG+ D T LKPSVILTGTAKEGSSGPP+GLVDIGVS+GAYLFRVALPGVRKD+SKVKFEIKSDGKVQIEGVM+GPG LK+SSAMYQMKVQQLCPPGPFT
Subjt:  VEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPL

A0A5D3CM92 Increased DNA methylation 3 isoform X21.1e-6790.97Show/hide
Query:  VEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFT
        +EG+ D T LKPSVILTGTAKEGSSGPP+GLVDIGVS+GAYLFRVALPGVRKD+SKVKFEIKSDGKVQIEGVM+GPG LK+SSAMYQMKVQQLCPPGPFT
Subjt:  VEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPL
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PPL
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPL

A0A6J1GI33 increased DNA methylation 3-like1.4e-7093.1Show/hide
Query:  MDVEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGP
        M +EGH DH KLKPSVILTGTAKEGSSGPP+GLVDIGVS+GAYLFRVALPGVRKD+SKVKFEIKSDG+V IEGVMTGPGLLKDSSAMYQMKVQQLCPPG 
Subjt:  MDVEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGP

Query:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP
        FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP
Subjt:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP

A0A6J1KJX1 increased DNA methylation 3-like2.6e-6992.41Show/hide
Query:  MDVEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGP
        M +EGH DH KLKPSVILTGTAKEGSSGPP+GLVDIGVS+GAYLFRVALPGVRKD+SKVKFEIKSDG+V IEGVMTGPGLLKDSSAMYQMKVQQLCPPG 
Subjt:  MDVEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGP

Query:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP
        FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADS PP
Subjt:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP

SwissProt top hitse value%identityAlignment
Q84K79 Alpha-crystallin domain-containing protein 22.37.8e-2345.16Show/hide
Query:  TKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEG-VMTGPGLLKDSSAMYQMKVQQLCPPGPFTVSFKLP
        ++ K  V LTG+A  G  G  +GLVDI  S+ +Y FRVALPGV +D+ +   EI+ DGK+ I+G   TG   +   + +++M  Q LCPPG FT++F+LP
Subjt:  TKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEG-VMTGPGLLKDSSAMYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPSFRPDGILEVVVMK
        GPV     + +F  DG+LE VV K
Subjt:  GPVDPRLSSPSFRPDGILEVVVMK

Q8RWL4 Increased DNA methylation 27.1e-2446.32Show/hide
Query:  GHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGV-MTGPGLLKDSSAMYQMKVQQLCPPGPFTV
        G +     KP V       E   G  VGL+DIG  D AYLFRV+LPGV++D+     E++ +GKV + GV  TG   +K  S +++M+ + LCPPG F+V
Subjt:  GHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGV-MTGPGLLKDSSAMYQMKVQQLCPPGPFTV

Query:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTV
        SF+LPGPV P   S +F  DGILE VVMK+    TV
Subjt:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTV

Q9SYQ0 Increased DNA methylation 33.5e-3154.47Show/hide
Query:  KPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMT-GPGLLKDSSAMYQMKVQQLCPPGPFTVSFKLPGPV
        +PSV+ TGTA + + G  VG+VDIGV+  AY F+VALPGVRKD  +   EI+SDGKV +EG  T G   +K  S +++M +++LCPPGPF + F LPGPV
Subjt:  KPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMT-GPGLLKDSSAMYQMKVQQLCPPGPFTVSFKLPGPV

Query:  DPRLSSPSFRPDGILEVVVMKSR
        DPRL SP+FR DGI E V+++ +
Subjt:  DPRLSSPSFRPDGILEVVVMKSR

Arabidopsis top hitse value%identityAlignment
AT1G20870.1 HSP20-like chaperones superfamily protein2.5e-3254.47Show/hide
Query:  KPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMT-GPGLLKDSSAMYQMKVQQLCPPGPFTVSFKLPGPV
        +PSV+ TGTA + + G  VG+VDIGV+  AY F+VALPGVRKD  +   EI+SDGKV +EG  T G   +K  S +++M +++LCPPGPF + F LPGPV
Subjt:  KPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMT-GPGLLKDSSAMYQMKVQQLCPPGPFTVSFKLPGPV

Query:  DPRLSSPSFRPDGILEVVVMKSR
        DPRL SP+FR DGI E V+++ +
Subjt:  DPRLSSPSFRPDGILEVVVMKSR

AT1G54840.1 HSP20-like chaperones superfamily protein5.0e-2546.32Show/hide
Query:  GHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGV-MTGPGLLKDSSAMYQMKVQQLCPPGPFTV
        G +     KP V       E   G  VGL+DIG  D AYLFRV+LPGV++D+     E++ +GKV + GV  TG   +K  S +++M+ + LCPPG F+V
Subjt:  GHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGV-MTGPGLLKDSSAMYQMKVQQLCPPGPFTV

Query:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTV
        SF+LPGPV P   S +F  DGILE VVMK+    TV
Subjt:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTV

AT1G76440.1 HSP20-like chaperones superfamily protein3.6e-3959.68Show/hide
Query:  HTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFTVSFKLP
        H+K+   V  TGTAK GS GPP+GLVDIGVS+ AY+FRV+LPG+ K+Q K+K EI+ +G+V I+GV+    +  D+  +Y+M+VQQLCPPGPF+++F LP
Subjt:  HTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPSFRPDGILEVVVMK
        G VDPRL SP+FR DGI EVVV+K
Subjt:  GPVDPRLSSPSFRPDGILEVVVMK

AT1G76440.2 HSP20-like chaperones superfamily protein3.6e-3959.68Show/hide
Query:  HTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFTVSFKLP
        H+K+   V  TGTAK GS GPP+GLVDIGVS+ AY+FRV+LPG+ K+Q K+K EI+ +G+V I+GV+    +  D+  +Y+M+VQQLCPPGPF+++F LP
Subjt:  HTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPSFRPDGILEVVVMK
        G VDPRL SP+FR DGI EVVV+K
Subjt:  GPVDPRLSSPSFRPDGILEVVVMK

AT1G76440.3 HSP20-like chaperones superfamily protein3.6e-3959.68Show/hide
Query:  HTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFTVSFKLP
        H+K+   V  TGTAK GS GPP+GLVDIGVS+ AY+FRV+LPG+ K+Q K+K EI+ +G+V I+GV+    +  D+  +Y+M+VQQLCPPGPF+++F LP
Subjt:  HTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPSFRPDGILEVVVMK
        G VDPRL SP+FR DGI EVVV+K
Subjt:  GPVDPRLSSPSFRPDGILEVVVMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTGGAAGGCCACGATGATCACACGAAGCTGAAGCCATCAGTTATTCTTACTGGAACAGCCAAGGAAGGTAGTTCAGGTCCTCCTGTTGGTCTTGTTGATATTGG
CGTGAGTGATGGTGCGTACCTTTTCCGCGTTGCACTGCCTGGTGTACGGAAAGATCAAAGTAAAGTAAAATTTGAGATCAAAAGCGATGGCAAGGTTCAGATTGAAGGAG
TGATGACAGGTCCAGGTCTTTTAAAAGATTCATCAGCTATGTATCAGATGAAAGTGCAGCAGCTGTGTCCGCCGGGACCTTTTACGGTTTCTTTTAAACTGCCTGGACCG
GTCGATCCGCGGTTGTCTTCTCCCAGTTTCCGGCCCGATGGCATTTTGGAAGTAGTGGTTATGAAGTCCAGAGCACCTCCAACAGTGGCTGATTCCCATCCACCTCTGTG
A
mRNA sequenceShow/hide mRNA sequence
GAGAGTTCGAGCCTCTCTCACCCCATATTTGTTTTTTTTAAATTTTTTTCCTTCCATTTTGAATTTAATGGCGAATCGCTTCACTTTATCGGCATTTTCAACAACCTTCT
CCGATTTCTGCCTTCTTCTTCTTCTCTCTTCTCATTACTTTTTTGCGAAAGATTGCACTGGACTTTGTGGAAATCACGAACTGCAAAAATCCGCATTGGAATACAGACGT
GGACCGTTCATTCTGAGAATATGCAGCAGGTGAATTAACAACATCAAACAGATAGTTTAGAAGTACCACAAGTGAAGACTGGAACATGGACGTGGAAGGCCACGATGATC
ACACGAAGCTGAAGCCATCAGTTATTCTTACTGGAACAGCCAAGGAAGGTAGTTCAGGTCCTCCTGTTGGTCTTGTTGATATTGGCGTGAGTGATGGTGCGTACCTTTTC
CGCGTTGCACTGCCTGGTGTACGGAAAGATCAAAGTAAAGTAAAATTTGAGATCAAAAGCGATGGCAAGGTTCAGATTGAAGGAGTGATGACAGGTCCAGGTCTTTTAAA
AGATTCATCAGCTATGTATCAGATGAAAGTGCAGCAGCTGTGTCCGCCGGGACCTTTTACGGTTTCTTTTAAACTGCCTGGACCGGTCGATCCGCGGTTGTCTTCTCCCA
GTTTCCGGCCCGATGGCATTTTGGAAGTAGTGGTTATGAAGTCCAGAGCACCTCCAACAGTGGCTGATTCCCATCCACCTCTGTGAGTCTGATGCAGCTAGTAGTAGGTA
CATGGTTTTGTTGTCTATTTTTGTTTTTCATTACTGGGCATGCATTGAAATTACCCCAAGACAAAAATGATGGGCAATGATTTTTCTTCTTCTTTTTAGCATGAAGCAGG
TCGTTAAATTATATACAATGTCATTTTGTCCATGAACGTTTTTAGGCCTCGAACTTATAACACAATTTTGATTATATTCTTGGACTTTCTATTCAA
Protein sequenceShow/hide protein sequence
MDVEGHDDHTKLKPSVILTGTAKEGSSGPPVGLVDIGVSDGAYLFRVALPGVRKDQSKVKFEIKSDGKVQIEGVMTGPGLLKDSSAMYQMKVQQLCPPGPFTVSFKLPGP
VDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPL