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Sed0004733 (gene) of Chayote v1 genome

Gene IDSed0004733
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:11802950..11804141
RNA-Seq ExpressionSed0004733
SyntenySed0004733
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022931752.1 uncharacterized protein LOC111438019 [Cucurbita moschata]2.9e-0629.06Show/hide
Query:  GRGGSRVVGQSIRI-GYDIARTSSQAETDGVPPVAPLVLPREGVE----ATERRETAPGAE------------FADSMRAMMVSLLSDQRAETQALLAAQ
        GR   R VG+ + + G    R+ +   T   PPV P V P   VE     T   + AP A               DS++A++ +L+++Q+A  Q      
Subjt:  GRGGSRVVGQSIRI-GYDIARTSSQAETDGVPPVAPLVLPREGVE----ATERRETAPGAE------------FADSMRAMMVSLLSDQRAETQALLAAQ

Query:  REESRAQIEQLTRMFQLGTAAPPTPQKQATTKADGAEGAEE---LGRWLNDFVQWKPEKF-DAVGDPLTAARWIAHVEYTFLIMVCPDVQRLRCVAHVLR
        + +++AQ   L ++      A    Q QAT +A+      +      W+ DF ++ P  F  ++ DP+ A  WIA VE TF  M CP+ Q++ C   VL+
Subjt:  REESRAQIEQLTRMFQLGTAAPPTPQKQATTKADGAEGAEE---LGRWLNDFVQWKPEKF-DAVGDPLTAARWIAHVEYTFLIMVCPDVQRLRCVAHVLR

Query:  GTA
          A
Subjt:  GTA

XP_022933130.1 uncharacterized protein LOC111439901 [Cucurbita moschata]1.1e-0530.57Show/hide
Query:  PPVAPLVLPREGVEATERRETAPGAEFADSMRAMMVSLLSDQRAETQALLAAQREESRAQIEQLTRM-FQLGTAAPPTPQKQATTKADGAEGAEE---LG
        P  AP   P  GV+A  R          DS++A++ +L+++Q+A  Q      + +++AQ   L ++  Q+   A    Q QAT +A+      +     
Subjt:  PPVAPLVLPREGVEATERRETAPGAEFADSMRAMMVSLLSDQRAETQALLAAQREESRAQIEQLTRM-FQLGTAAPPTPQKQATTKADGAEGAEE---LG

Query:  RWLNDFVQWKPEKF-DAVGDPLTAARWIAHVEYTFLIMVCPDVQRLRCVAHVLRGTA
         W+ DF ++ P  F  ++ DP+ A  WIA VE TF  M CP+ Q++ C   VL+  A
Subjt:  RWLNDFVQWKPEKF-DAVGDPLTAARWIAHVEYTFLIMVCPDVQRLRCVAHVLRGTA

XP_022961586.1 uncharacterized protein LOC111462120 [Cucurbita moschata]3.2e-0530.23Show/hide
Query:  DSMRAMMVSLLSDQRAETQALLAAQREESRAQIEQLTRMFQLGTAAPPTPQKQATTKADGAEGAEE---LGRWLNDFVQWKPEKF-DAVGDPLTAARWIA
        DS++A++ +L+++Q+   Q   A ++ +++AQ + L  + Q+        Q QAT +A+      +      W+ DF ++ P  F  ++ DP+ A  WIA
Subjt:  DSMRAMMVSLLSDQRAETQALLAAQREESRAQIEQLTRMFQLGTAAPPTPQKQATTKADGAEGAEE---LGRWLNDFVQWKPEKF-DAVGDPLTAARWIA

Query:  HVEYTFLIMVCPDVQRLRCVAHVLRGTAR
         VE TF  M CP+ Q++ C   VL+  A+
Subjt:  HVEYTFLIMVCPDVQRLRCVAHVLRGTAR

XP_023520578.1 uncharacterized protein LOC111783991 [Cucurbita pepo subsp. pepo]5.8e-0729.41Show/hide
Query:  GRGGSRVVGQSIRI-GYDIARTSSQAETDGVPPVAPLVLPREGVE----ATERRETAPGAE------------FADSMRAMMVSLLSDQRAETQALLAAQ
        GR   R VG+ + + G    R+ +   T   PPV P V P   VE     T   + AP A               DS++A++ +L+++Q+A  Q      
Subjt:  GRGGSRVVGQSIRI-GYDIARTSSQAETDGVPPVAPLVLPREGVE----ATERRETAPGAE------------FADSMRAMMVSLLSDQRAETQALLAAQ

Query:  REESRAQIEQLTRM-FQLGTAAPPTPQKQATTKADGAEGAEE---LGRWLNDFVQWKPEKF-DAVGDPLTAARWIAHVEYTFLIMVCPDVQRLRCVAHVL
        + +++AQ   L ++  Q+   A    Q QAT +A+      +      W+ DF ++ P  F  ++ DP+ A  WIA VE TF  M CP+ Q++ C   VL
Subjt:  REESRAQIEQLTRM-FQLGTAAPPTPQKQATTKADGAEGAEE---LGRWLNDFVQWKPEKF-DAVGDPLTAARWIAHVEYTFLIMVCPDVQRLRCVAHVL

Query:  RGTA
        +  A
Subjt:  RGTA

TrEMBL top hitse value%identityAlignment
A0A6J1EUK6 uncharacterized protein LOC1114380191.4e-0629.06Show/hide
Query:  GRGGSRVVGQSIRI-GYDIARTSSQAETDGVPPVAPLVLPREGVE----ATERRETAPGAE------------FADSMRAMMVSLLSDQRAETQALLAAQ
        GR   R VG+ + + G    R+ +   T   PPV P V P   VE     T   + AP A               DS++A++ +L+++Q+A  Q      
Subjt:  GRGGSRVVGQSIRI-GYDIARTSSQAETDGVPPVAPLVLPREGVE----ATERRETAPGAE------------FADSMRAMMVSLLSDQRAETQALLAAQ

Query:  REESRAQIEQLTRMFQLGTAAPPTPQKQATTKADGAEGAEE---LGRWLNDFVQWKPEKF-DAVGDPLTAARWIAHVEYTFLIMVCPDVQRLRCVAHVLR
        + +++AQ   L ++      A    Q QAT +A+      +      W+ DF ++ P  F  ++ DP+ A  WIA VE TF  M CP+ Q++ C   VL+
Subjt:  REESRAQIEQLTRMFQLGTAAPPTPQKQATTKADGAEGAEE---LGRWLNDFVQWKPEKF-DAVGDPLTAARWIAHVEYTFLIMVCPDVQRLRCVAHVLR

Query:  GTA
          A
Subjt:  GTA

A0A6J1F423 uncharacterized protein LOC1114399015.3e-0630.57Show/hide
Query:  PPVAPLVLPREGVEATERRETAPGAEFADSMRAMMVSLLSDQRAETQALLAAQREESRAQIEQLTRM-FQLGTAAPPTPQKQATTKADGAEGAEE---LG
        P  AP   P  GV+A  R          DS++A++ +L+++Q+A  Q      + +++AQ   L ++  Q+   A    Q QAT +A+      +     
Subjt:  PPVAPLVLPREGVEATERRETAPGAEFADSMRAMMVSLLSDQRAETQALLAAQREESRAQIEQLTRM-FQLGTAAPPTPQKQATTKADGAEGAEE---LG

Query:  RWLNDFVQWKPEKF-DAVGDPLTAARWIAHVEYTFLIMVCPDVQRLRCVAHVLRGTA
         W+ DF ++ P  F  ++ DP+ A  WIA VE TF  M CP+ Q++ C   VL+  A
Subjt:  RWLNDFVQWKPEKF-DAVGDPLTAARWIAHVEYTFLIMVCPDVQRLRCVAHVLRGTA

A0A6J1FAD6 uncharacterized protein LOC1114438556.4e-0426.8Show/hide
Query:  PPVAPLVLPREGVEATERRETAPGAEFADSMRAMMVSLLSDQRAETQALLAAQREESRAQIEQLTRMFQLGTAAPPTPQKQATTKADGAEGAEELGRWLN
        P  AP   P  GV+   R          DS++A++ +L+++Q+A  Q      + +++AQ++   +      A  P    Q                W+ 
Subjt:  PPVAPLVLPREGVEATERRETAPGAEFADSMRAMMVSLLSDQRAETQALLAAQREESRAQIEQLTRMFQLGTAAPPTPQKQATTKADGAEGAEELGRWLN

Query:  DFVQWKPEKF-DAVGDPLTAARWIAHVEYTFLIMVCPDVQRLRCVAHVLRGTA
        DF ++ P  F  ++ DP+    WIA VE TF  M CP+ Q++ C   VL+  A
Subjt:  DFVQWKPEKF-DAVGDPLTAARWIAHVEYTFLIMVCPDVQRLRCVAHVLRGTA

A0A6J1HAS0 uncharacterized protein LOC1114621201.5e-0530.23Show/hide
Query:  DSMRAMMVSLLSDQRAETQALLAAQREESRAQIEQLTRMFQLGTAAPPTPQKQATTKADGAEGAEE---LGRWLNDFVQWKPEKF-DAVGDPLTAARWIA
        DS++A++ +L+++Q+   Q   A ++ +++AQ + L  + Q+        Q QAT +A+      +      W+ DF ++ P  F  ++ DP+ A  WIA
Subjt:  DSMRAMMVSLLSDQRAETQALLAAQREESRAQIEQLTRMFQLGTAAPPTPQKQATTKADGAEGAEE---LGRWLNDFVQWKPEKF-DAVGDPLTAARWIA

Query:  HVEYTFLIMVCPDVQRLRCVAHVLRGTAR
         VE TF  M CP+ Q++ C   VL+  A+
Subjt:  HVEYTFLIMVCPDVQRLRCVAHVLRGTAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATTACCCGCGCAGGAAGAGGAGGTTCGAGAGTAGTAGGTCAGAGTATCAGGATTGGTTATGATATCGCTAGGACATCGTCCCAAGCTGAGACAGATGGTGTGCC
ACCAGTAGCTCCTCTTGTTTTGCCTAGAGAAGGCGTTGAGGCGACCGAGCGCCGAGAGACTGCTCCTGGAGCAGAGTTTGCAGATTCCATGAGGGCCATGATGGTCAGTT
TGTTGAGTGACCAGAGGGCAGAGACCCAGGCTTTGTTGGCCGCGCAGCGGGAAGAGTCTCGGGCCCAGATAGAGCAGTTGACTCGTATGTTCCAGCTGGGCACTGCAGCA
CCACCAACTCCACAGAAGCAAGCAACCACAAAGGCAGATGGGGCAGAGGGTGCTGAGGAACTTGGCAGATGGCTGAATGACTTTGTGCAGTGGAAGCCAGAGAAGTTCGA
CGCCGTAGGAGATCCATTAACAGCAGCCAGATGGATTGCCCATGTGGAGTACACCTTTCTGATTATGGTGTGTCCTGATGTCCAGAGGCTGCGTTGTGTAGCTCATGTGT
TAAGAGGCACAGCTAGATAG
mRNA sequenceShow/hide mRNA sequence
GTTTTGAATGTTTTGAATAAATCTCTGATCAGAGTATGTTTTAAACTGATTTTAGCTTGAAACAGGTGCTTCGAAACAGGGACAGGTTTTAGGTCATTTTATAATTGGTT
ATTTCATGAATGTTTACAAGTTTTATTTTCATTCAGAATCTGGAAAGCAATCTTGCATATTATTATTAGTTTTAAAAGCATGCATTGAGGTAAAGGCCTAGTTTATGACC
TTTTTTTGGTCGGGTCTTTACAGTTGGTATCAGAGCTTAGAGTCATAGATTTTGTAGACTGACCTTTTGTTGTAGGTCGTTTTCCATGATCATCAACACTCCGACAGTCA
TCAGATCGCCAACATGCCAATTACCCGCGCAGGAAGAGGAGGTTCGAGAGTAGTAGGTCAGAGTATCAGGATTGGTTATGATATCGCTAGGACATCGTCCCAAGCTGAGA
CAGATGGTGTGCCACCAGTAGCTCCTCTTGTTTTGCCTAGAGAAGGCGTTGAGGCGACCGAGCGCCGAGAGACTGCTCCTGGAGCAGAGTTTGCAGATTCCATGAGGGCC
ATGATGGTCAGTTTGTTGAGTGACCAGAGGGCAGAGACCCAGGCTTTGTTGGCCGCGCAGCGGGAAGAGTCTCGGGCCCAGATAGAGCAGTTGACTCGTATGTTCCAGCT
GGGCACTGCAGCACCACCAACTCCACAGAAGCAAGCAACCACAAAGGCAGATGGGGCAGAGGGTGCTGAGGAACTTGGCAGATGGCTGAATGACTTTGTGCAGTGGAAGC
CAGAGAAGTTCGACGCCGTAGGAGATCCATTAACAGCAGCCAGATGGATTGCCCATGTGGAGTACACCTTTCTGATTATGGTGTGTCCTGATGTCCAGAGGCTGCGTTGT
GTAGCTCATGTGTTAAGAGGCACAGCTAGATAGTGGTGGGAGTCCACTTTGAGTGAGAGACCAGCTGGGTCTCCACCTACCGCCTGAGATTTCTTTAAGACGGAGTTTAA
GGCCAAGTATATCAGTGATGAGGCCCAGGAGAAGATGGTAGAGCTGTTCCAAAACCTGAAGCAGGGATCTGATTC
Protein sequenceShow/hide protein sequence
MPITRAGRGGSRVVGQSIRIGYDIARTSSQAETDGVPPVAPLVLPREGVEATERRETAPGAEFADSMRAMMVSLLSDQRAETQALLAAQREESRAQIEQLTRMFQLGTAA
PPTPQKQATTKADGAEGAEELGRWLNDFVQWKPEKFDAVGDPLTAARWIAHVEYTFLIMVCPDVQRLRCVAHVLRGTAR