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Sed0004760 (gene) of Chayote v1 genome

Gene IDSed0004760
OrganismSechium edule (Chayote v1)
Descriptiontranslation machinery-associated protein 7-like
Genome locationLG01:4030558..4032918
RNA-Seq ExpressionSed0004760
SyntenySed0004760
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
InterPro domainsIPR015157 - Translation machinery associated TMA7


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3450761.1 hypothetical protein FNV43_RR06850 [Rhamnella rubrinervis]9.0e-2190.62Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MSSKQGGKAKPLKQPKA+KKDYD++D+ANIQKKKDEEKALKELRAKAQQKG+FGG+GLKKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

KAG7018868.1 Translation machinery-associated protein 7 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-2193.75Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MSSKQGGKAKPLKQPK EKKDYD+VD+ANIQKKKDEEKAL+ELRAKAQQKGAFGGAGLKKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

XP_022924253.1 translation machinery-associated protein 7-like [Cucurbita moschata]4.0e-2193.75Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MSSKQGGKAKPLKQPK EKKDYD+VD+ANIQKKKDEEKAL+ELRAKAQQKGAFGGAGLKKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

XP_022980452.1 translation machinery-associated protein 7-like [Cucurbita maxima]4.0e-2193.75Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MSSKQGGKAKPLKQPK EKKDYD+VD+ANIQKKKDEEKAL+ELRAKAQQKGAFGGAGLKKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

XP_038888592.1 translation machinery-associated protein 7-like [Benincasa hispida]1.2e-2092.19Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MSSKQGGKAKPLKQPK +KKDYD+VD+ANIQKKKDEEKALKELRAKAQQKG FGGAGLKKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

TrEMBL top hitse value%identityAlignment
A0A314UCK9 Uncharacterized protein1.3e-2090.62Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MSSKQGGKAKPLKQPK+EKKDYD+ D+AN+QKKKDEEKALKELRAKAQQKG+FGGAGLKKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

A0A6J1EBW2 translation machinery-associated protein 7-like2.0e-2193.75Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MSSKQGGKAKPLKQPK EKKDYD+VD+ANIQKKKDEEKAL+ELRAKAQQKGAFGGAGLKKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

A0A6J1IRF0 translation machinery-associated protein 7-like2.0e-2193.75Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MSSKQGGKAKPLKQPK EKKDYD+VD+ANIQKKKDEEKAL+ELRAKAQQKGAFGGAGLKKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

A0A6J5WMY7 Uncharacterized protein1.3e-2090.62Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MSSKQGGKAKPLKQPK+EKKDYD+ D+AN+QKKKDEEKALKELRAKAQQKG+FGGAGLKKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

W9S4Y5 Uncharacterized protein1.3e-2089.06Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MSSKQGGKAKPLKQPKA+KKDYD+VD+AN+QKKKDEEKALK+L+AKAQQKGAFGG+GLKKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

SwissProt top hitse value%identityAlignment
A1A4Q4 Translation machinery-associated protein 72.2e-0956.25Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MS ++GGK KPLKQPK + K+ D+ D A  QK+K+E+K L+EL+AKA  KG     G+KKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

Q28GR1 Translation machinery-associated protein 75.7e-1054.69Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MS ++GGK KPLKQPK   KD D+ ++A  QK+K+++K L E++ KA QKG   G G+KKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

Q4SUE2 Translation machinery-associated protein 73.9e-1157.81Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MS ++GGK KPLK PK + KD DD DVA  QK+K+++KA++ L+A+A  KG  GG+G+KKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

Q8K003 Translation machinery-associated protein 72.2e-0956.25Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MS ++GGK KPLKQPK + K+ D+ D A  QK+K+E+K L+EL+AKA  KG     G+KKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

Q9Y2S6 Translation machinery-associated protein 72.2e-0956.25Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MS ++GGK KPLKQPK + K+ D+ D A  QK+K+E+K L+EL+AKA  KG     G+KKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

Arabidopsis top hitse value%identityAlignment
AT1G15270.1 Translation machinery associated TMA72.1e-2387.5Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MSSKQGGKAKPLKQPKA+KK+YD+ D+ANIQKKKDEEKALKELRAKA QKG+FGG+GLKKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK

AT3G16040.1 Translation machinery associated TMA71.1e-1979.69Show/hide
Query:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK
        MSSKQGGK KPLKQPK+ KK+YD+ D+  +QKKKDEEKALKELRAKA QKG+FGG+GLKKSGKK
Subjt:  MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCCAAGCAAGGAGGGAAAGCAAAGCCCCTGAAGCAACCCAAGGCTGAGAAGAAAGATTATGACGATGTTGATGTAGCCAATATTCAAAAGAAGAAGGACGAGGA
AAAGGCGCTGAAGGAGCTTAGAGCAAAGGCCCAGCAGAAGGGTGCCTTTGGAGGTGCTGGGCTCAAGAAGAGTGGGAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATTTGGGGCACCGGTTCAGCCTCCTCCGTTCATTTACAAATAAAAAACGCAACCTAGGGTTCTTATTCTCGCGTTTTTTTTCCTTGATTTTCACCGGCATCTCATTCGCC
TTCTCGTTGGTGAAGTAGCGGGTTGCAGCGTTCCCTCTTTGTGTTTTTCGACTCGTTCGAAGCCCATCAATATCTTAGCCATGTCGTCCAAGCAAGGAGGGAAAGCAAAG
CCCCTGAAGCAACCCAAGGCTGAGAAGAAAGATTATGACGATGTTGATGTAGCCAATATTCAAAAGAAGAAGGACGAGGAAAAGGCGCTGAAGGAGCTTAGAGCAAAGGC
CCAGCAGAAGGGTGCCTTTGGAGGTGCTGGGCTCAAGAAGAGTGGGAAGAAATGAGTATTCCATCGCAATGTAATGTAGATTACTTGCTGGAATTCGGATATCTGATTTG
TCTTTTTAAGCAGTTGATTGTGTGCCATGTTGCCCTCTTCATGAAACCTGAATAACATGAAGTCAAATGCTTTACTATTTTCGTGTTCTGTTCTGTGTCGAAACCTGGTA
GATAATATGATGTGGGTGAATGATTATAGAAGTTGAATGTTTTCCTCTATATATCTTTTCTAGTTGAAAATATAGGCTAAAAGGTGAAGATAATTGCATTGCTGATGCAT
CCTTTTTTAAGTTATAAGCAAAAAATAATTTTGTAGGTTCCTTGGTGTGGCTTAGTGGTCAGAATGTGCTTAATCTAGAAAAGTCAGGTGTGGCTTAGAATTAATGTCAT
CAAATTATGTCATCGATCTGTCTTATATATGTAATCAATTCTAAAGGATAAGGAAACTTATTATCTACTTATAAATTATCACAGTTGTCCGGTTCATTGCTTACCATGCG
Protein sequenceShow/hide protein sequence
MSSKQGGKAKPLKQPKAEKKDYDDVDVANIQKKKDEEKALKELRAKAQQKGAFGGAGLKKSGKK