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Sed0004773 (gene) of Chayote v1 genome

Gene IDSed0004773
OrganismSechium edule (Chayote v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like
Genome locationLG01:12534698..12536803
RNA-Seq ExpressionSed0004773
SyntenySed0004773
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR039993 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8022523.1 hypothetical protein BT93_F0134 [Corymbia citriodora subsp. variegata]7.6e-5192.45Show/hide
Query:  MGRKK-TVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV
        MGRKK TVEFDESPPD FDAANPYKDPVAMLEMREHIVREKWIDIEKAKILR++++WCYRVEGINHLQKCRHLV QYLESTRGIGWGKDGRHPSLHGPKV
Subjt:  MGRKK-TVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV

Query:  EAVESD
        E+VESD
Subjt:  EAVESD

XP_022954577.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita moschata]4.4e-5190.48Show/hide
Query:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPD FDA +PYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYR+EG+NHLQKCRHLV QYL+STRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE

Query:  AVESD
        AVE++
Subjt:  AVESD

XP_022994087.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Cucurbita maxima]1.5e-5191.43Show/hide
Query:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPD FDA +PYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYR+EG+NHLQKCRHLV QYL+STRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE

Query:  AVESD
        AVE++
Subjt:  AVESD

XP_030521299.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like [Rhodamnia argentea]7.6e-5191.51Show/hide
Query:  MGRKK-TVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV
        MGRKK TVEFDESPPD FDAANPYKDPVAMLEMREHIVREKWIDIEKAKILR++++WCYR+EGINHLQKCRHLV QYLESTRGIGWGKDGRHPSLHGPKV
Subjt:  MGRKK-TVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV

Query:  EAVESD
        E+VESD
Subjt:  EAVESD

XP_038894613.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B [Benincasa hispida]7.6e-5190.48Show/hide
Query:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPD FD  +PYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYR+EG+NHLQKCRHLV QYL+STRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE

Query:  AVESD
        A ES+
Subjt:  AVESD

TrEMBL top hitse value%identityAlignment
A0A059A4F1 Uncharacterized protein4.8e-5191.51Show/hide
Query:  MGRKK-TVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV
        MGRKK TVEFDESPPD FDAANPYKDPVAMLEMREHIVREKWIDIEKAKI+R++++WCYRVEGINHLQKCRHLV QYLESTRGIGWGKDGRHPSLHGPKV
Subjt:  MGRKK-TVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV

Query:  EAVESD
        E+VESD
Subjt:  EAVESD

A0A6J1E7Z3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B8.2e-5189.52Show/hide
Query:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPD FD  +PYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYR+EG+NHLQKCRHLV QYL+STRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE

Query:  AVESD
        +VES+
Subjt:  AVESD

A0A6J1GRC0 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like2.2e-5190.48Show/hide
Query:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPD FDA +PYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYR+EG+NHLQKCRHLV QYL+STRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE

Query:  AVESD
        AVE++
Subjt:  AVESD

A0A6J1JUQ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B-like7.4e-5291.43Show/hide
Query:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPD FDA +PYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYR+EG+NHLQKCRHLV QYL+STRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE

Query:  AVESD
        AVE++
Subjt:  AVESD

A0A6J1KJX6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B8.2e-5189.52Show/hide
Query:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE
        MGRKKTVEFDESPPD FD  +PYKDPVAMLEMREHIVREKWI+IEKAKILREKLRWCYR+EG+NHLQKCRHLV QYL+STRGIGWGKDGRHPSLHGPKVE
Subjt:  MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVE

Query:  AVESD
        +VES+
Subjt:  AVESD

SwissProt top hitse value%identityAlignment
Q03015 NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial6.3e-0838.46Show/hide
Query:  PDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLE
        P  FD  + Y D   + + ++ I+RE+W+ +   +++RE+L  CY  EG+NHL+KC HL  +YL+
Subjt:  PDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLE

Q94C12 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B4.9e-4579.25Show/hide
Query:  MGRKKTV-EFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PDGFD  NPYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYRVEG+NH QKCRHLV QYL+STRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV

Query:  EAVESD
        EAVE++
Subjt:  EAVESD

Q9M9B4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A2.7e-4378.85Show/hide
Query:  MGRKKTV-EFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PDGFD  NPYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYRVEG+NH QKCRHLV QYL++TRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV

Query:  EAVE
         AVE
Subjt:  EAVE

Arabidopsis top hitse value%identityAlignment
AT1G49140.1 Complex I subunit NDUFS61.9e-4478.85Show/hide
Query:  MGRKKTV-EFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PDGFD  NPYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYRVEG+NH QKCRHLV QYL++TRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV

Query:  EAVE
         AVE
Subjt:  EAVE

AT3G18410.1 Complex I subunit NDUFS63.5e-4679.25Show/hide
Query:  MGRKKTV-EFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PDGFD  NPYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYRVEG+NH QKCRHLV QYL+STRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV

Query:  EAVESD
        EAVE++
Subjt:  EAVESD

AT3G18410.2 Complex I subunit NDUFS63.5e-4679.25Show/hide
Query:  MGRKKTV-EFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV
        MGRKK + EF+ES PDGFD  NPYKDPVAM+EMREHIVREKWI IEKAKILREK++WCYRVEG+NH QKCRHLV QYL+STRG+GWGKD R  SLHGPK 
Subjt:  MGRKKTV-EFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKV

Query:  EAVESD
        EAVE++
Subjt:  EAVESD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGAAGAAGACGGTGGAGTTCGACGAATCACCGCCGGATGGTTTCGATGCGGCGAATCCGTACAAGGATCCGGTGGCGATGCTGGAGATGAGGGAACACATTGT
GAGGGAAAAATGGATCGATATCGAAAAGGCGAAGATTCTGAGGGAAAAGCTCCGATGGTGCTACCGCGTCGAAGGAATCAATCATCTTCAGAAATGCCGCCATCTCGTTC
ACCAATACCTTGAATCTACTCGAGGCATCGGCTGGGGAAAGGACGGCCGCCATCCATCCCTTCATGGTCCTAAAGTGGAGGCAGTCGAATCGGATAGACATGTTATTATC
ATTAAGCGGGGGGTCGTTGTATTTGTATACACCTTTGAGGATTTTGTTGCTATATGGGATCCTGCCTTGCAATTTGTTGTCCTTAGAAATGGTGTGAGTTGGGAAATTGA
TTACTTCATCTATTTGTTCTATGTTGGAAAAATTGCCGAGAGACTTGATGAGGGAGGAGTGGGAATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGAAGAAGACGGTGGAGTTCGACGAATCACCGCCGGATGGTTTCGATGCGGCGAATCCGTACAAGGATCCGGTGGCGATGCTGGAGATGAGGGAACACATTGT
GAGGGAAAAATGGATCGATATCGAAAAGGCGAAGATTCTGAGGGAAAAGCTCCGATGGTGCTACCGCGTCGAAGGAATCAATCATCTTCAGAAATGCCGCCATCTCGTTC
ACCAATACCTTGAATCTACTCGAGGCATCGGCTGGGGAAAGGACGGCCGCCATCCATCCCTTCATGGTCCTAAAGTGGAGGCAGTCGAATCGGATAGACATGTTATTATC
ATTAAGCGGGGGGTCGTTGTATTTGTATACACCTTTGAGGATTTTGTTGCTATATGGGATCCTGCCTTGCAATTTGTTGTCCTTAGAAATGGTGTGAGTTGGGAAATTGA
TTACTTCATCTATTTGTTCTATGTTGGAAAAATTGCCGAGAGACTTGATGAGGGAGGAGTGGGAATCTAG
Protein sequenceShow/hide protein sequence
MGRKKTVEFDESPPDGFDAANPYKDPVAMLEMREHIVREKWIDIEKAKILREKLRWCYRVEGINHLQKCRHLVHQYLESTRGIGWGKDGRHPSLHGPKVEAVESDRHVII
IKRGVVVFVYTFEDFVAIWDPALQFVVLRNGVSWEIDYFIYLFYVGKIAERLDEGGVGI