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Sed0004781 (gene) of Chayote v1 genome

Gene IDSed0004781
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:42164431..42167322
RNA-Seq ExpressionSed0004781
SyntenySed0004781
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606995.1 hypothetical protein SDJN03_00337, partial [Cucurbita argyrosperma subsp. sororia]1.3e-5680.58Show/hide
Query:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG
        MALNLHCCC S RF+ +H +V  +  RS  LNRTSK SANS KF  IRSSANSND   LRTCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDV
        GTM+TPD+GKV QYWHCCGSEDPFDPGCTAAPHSSYDDV
Subjt:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDV

XP_022143294.1 uncharacterized protein LOC111013199 [Momordica charantia]2.9e-6184.78Show/hide
Query:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG
        MALNLHC CSS RFLPL PK   +VLRSDRLNR SK SA+S KFHTIR+SANSN+   LRTCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        GTM+TPD+GKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
Subjt:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

XP_022948602.1 uncharacterized protein LOC111452227 [Cucurbita moschata]2.2e-5680.58Show/hide
Query:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG
        MALNLHCCC S RF+  H +V  +  RS  LNRTSK SANS KF  IRSSANSND   LRTCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDV
        GTM+TPD+GKV QYWHCCGSEDPFDPGCTAAPHSSYDDV
Subjt:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDV

XP_023522633.1 uncharacterized protein LOC111786627 [Cucurbita pepo subsp. pepo]9.7e-5779.86Show/hide
Query:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG
        MALNLHCCC S RF+  H +V  +  RS  LNRTSK SANSPK +TIRSSANS++   LRTCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDV
        GTM+TPD+GKV QYWHCCGSEDPFDPGCTAAPHSSYDDV
Subjt:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDV

XP_038879129.1 uncharacterized protein LOC120071126 [Benincasa hispida]3.9e-5882.61Show/hide
Query:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG
        MALNLHC  SS RFL LHPK+  QV+RSDRLNRTSK S+NSPKF  IRSSA+SN+   LRTCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVH+G
Subjt:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        GTM+TPD+GKVFQYWHCCGSEDPFDPGCTA+PHSSYDD
Subjt:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

TrEMBL top hitse value%identityAlignment
A0A0A0L8V5 Uncharacterized protein8.3e-5478.26Show/hide
Query:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG
        MA NLHC  SS  F+ LH K    VLRSD LNRTSK S+NSPK  TIR SANSN+   LRTCRNCK QF  SLNHPRACRFHT+HFGGETKRKFESVH+G
Subjt:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        GTM+TPD+GKVFQYWHCCGSEDPFDPGCTA+PHSSYDD
Subjt:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

A0A1S3C5F2 uncharacterized protein LOC1034968576.2e-4974.64Show/hide
Query:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG
        MA NLHC  SS  F+ LH    P VLRS     TSK  +NS KF +IR SANSN+   LRTCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVH G
Subjt:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        GTM+TPD+GKVFQYWHCCGSEDPFDPGCTA+PHSSYDD
Subjt:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

A0A6J1CNX1 uncharacterized protein LOC1110131991.4e-6184.78Show/hide
Query:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG
        MALNLHC CSS RFLPL PK   +VLRSDRLNR SK SA+S KFHTIR+SANSN+   LRTCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        GTM+TPD+GKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
Subjt:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

A0A6J1G9P5 uncharacterized protein LOC1114522271.0e-5680.58Show/hide
Query:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG
        MALNLHCCC S RF+  H +V  +  RS  LNRTSK SANS KF  IRSSANSND   LRTCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDV
        GTM+TPD+GKV QYWHCCGSEDPFDPGCTAAPHSSYDDV
Subjt:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDV

A0A6J1K626 uncharacterized protein LOC1114926452.3e-5679.14Show/hide
Query:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG
        MALNLHCCC S RF+  H +V  +  RS  LNRTSK SANSPK + IRSSANS++   LRTCRNCK QF  SLNHPRACRFHTAHFGGETKRKFESVHTG
Subjt:  MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSND---LRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTG

Query:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDV
        GTM+TPD+GKV QYWHCCGSEDPFDPGCTAAPHSSYDDV
Subjt:  GTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65000.1 unknown protein2.3e-0833.73Show/hide
Query:  RTCRNCKGQFQSSLNHPRACRFHTAHF----GGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD
        + C+ CK  +    N   +CRFH + F      + KR +E       +   D     +++ CCG+EDP  PGC   PH SYDD
Subjt:  RTCRNCKGQFQSSLNHPRACRFHTAHF----GGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGSEDPFDPGCTAAPHSSYDD

AT5G38060.1 unknown protein3.7e-3864.04Show/hide
Query:  VLRSDRLNRTSKSSANSPKFH---TIRSSANSNDLRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGSEDPF
        ++ S  L        NS +F    T  SS     LRTC+NCK QF   LN+PRACRFHTAHFGGETKRKFESV+TGGTM+TP++GKV QYWHCCGSEDPF
Subjt:  VLRSDRLNRTSKSSANSPKFH---TIRSSANSNDLRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGSEDPF

Query:  DPGCTAAPHSSYDD
        D GCTA+PH++YDD
Subjt:  DPGCTAAPHSSYDD

AT5G38060.2 unknown protein7.0e-2954.39Show/hide
Query:  VLRSDRLNRTSKSSANSPKFH---TIRSSANSNDLRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGSEDPF
        ++ S  L        NS +F    T  SS     LRTC+NCK QF   LN+PRACRFHTAHFG            GGTM+TP++GKV QYWHCCGSEDPF
Subjt:  VLRSDRLNRTSKSSANSPKFH---TIRSSANSNDLRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQYWHCCGSEDPF

Query:  DPGCTAAPHSSYDD
        D GCTA+PH++YDD
Subjt:  DPGCTAAPHSSYDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCAATCTCCATTGTTGCTGTTCATCGATTCGATTCCTTCCTCTCCATCCAAAAGTTTCGCCTCAAGTTCTTCGTTCCGATCGTCTGAATCGCACTTCGAAATC
GAGTGCAAATTCGCCCAAATTCCATACAATTCGCAGCTCTGCGAATTCGAACGACCTTAGAACTTGCAGGAATTGCAAGGGTCAATTTCAATCCTCCCTTAATCACCCAC
GAGCTTGCCGATTTCACACTGCCCATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACACAGGAGGAACAATGAACACTCCAGATGCAGGCAAAGTATTTCAA
TATTGGCATTGTTGTGGGTCCGAGGATCCTTTCGATCCAGGATGTACTGCTGCTCCACACTCGTCCTACGATGATGTTTAA
mRNA sequenceShow/hide mRNA sequence
TTTTCATGTAAGGGCAGAAGAAGTAAAATCGTTTCAATTGATCTTCAAGAATTGAATGAGAGCTTCTTGTTTACAAATTCCACAGCAATGGCTCTCAATCTCCATTGTTG
CTGTTCATCGATTCGATTCCTTCCTCTCCATCCAAAAGTTTCGCCTCAAGTTCTTCGTTCCGATCGTCTGAATCGCACTTCGAAATCGAGTGCAAATTCGCCCAAATTCC
ATACAATTCGCAGCTCTGCGAATTCGAACGACCTTAGAACTTGCAGGAATTGCAAGGGTCAATTTCAATCCTCCCTTAATCACCCACGAGCTTGCCGATTTCACACTGCC
CATTTTGGAGGTGAAACAAAGAGAAAGTTTGAAAGTGTACACACAGGAGGAACAATGAACACTCCAGATGCAGGCAAAGTATTTCAATATTGGCATTGTTGTGGGTCCGA
GGATCCTTTCGATCCAGGATGTACTGCTGCTCCACACTCGTCCTACGATGATGTTTAATACCGCAAATTTACAACCTTTCTTCAAGGTCCCATCTTTCATGCAAGACTCT
TGTACATTTTCTTTCTTACTGAAATCATGTGCCCAAGTGCACATGTTCATATCCTATCTGAATTGGTTATCTACTGCCATTTTCGTGGCATGCATGTGTATGATGTATTT
CATTGTTAGTTAGGGGCTGTTTGTTTGACATATTTAGGTAATTTTTCAGTTAAGGAGTTATATTGAGTAGTTAAAAATTGAGAGTTGTGTCAAAAACTCGTTTGGATGTA
GTTTTTTTGTAGAAGAGTTAAGAGTCAAAATCTTGTTTGGATGTAGATTTAAAAATGAGTAGTTATTTTTAGTAGTTAAAAAAAATGATTAAAAGTGAATGGTTAAAAAT
GAGTTATTTTGATTGATTTGAAAACAATGATTAAAAATAAGTAGTTAGAAATGATTGAGTACTATAAATGAATGATTAAAATTGAATGGTTAGAAATGAGAGTTAATTTT
AAAAGTAAAAATGATGAGAAGTTAATAAAAACTCGTTCGGATGTAAGTTTTCGACGAGGAGTTAATAAAAACTAAAAATAATTCCTACCTAAATATGTCAAATAAAC
Protein sequenceShow/hide protein sequence
MALNLHCCCSSIRFLPLHPKVSPQVLRSDRLNRTSKSSANSPKFHTIRSSANSNDLRTCRNCKGQFQSSLNHPRACRFHTAHFGGETKRKFESVHTGGTMNTPDAGKVFQ
YWHCCGSEDPFDPGCTAAPHSSYDDV