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Sed0004834 (gene) of Chayote v1 genome

Gene IDSed0004834
OrganismSechium edule (Chayote v1)
DescriptionMic1 domain-containing protein
Genome locationLG12:9434373..9436580
RNA-Seq ExpressionSed0004834
SyntenySed0004834
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651130.1 hypothetical protein Csa_002376 [Cucumis sativus]1.4e-1063.64Show/hide
Query:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNT
        MDR  +ATASLL+RVL++CASQ              G  VAAKVPKVERDMCLK F+ALKSCMQNT
Subjt:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNT
KAG6580793.1 hypothetical protein SDJN03_20795, partial [Cucurbita argyrosperma subsp. sororia]4.9e-1163.89Show/hide
Query:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
        MDR  KATASLL+RVL+TCASQ              G  VA+KVPKVERDMCLK F+ALKSCMQNT  LR K
Subjt:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
PRQ44425.1 hypothetical protein RchiOBHm_Chr3g0479131 [Rosa chinensis]1.6e-0655.22Show/hide
Query:  KATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
        K +AS L+R+L+TCA+Q              G  VAAKVP+VERDMCLK F+ALKSCMQN   LR K
Subjt:  KATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
TYG83353.1 hypothetical protein ES288_D01G161400v1 [Gossypium darwinii]2.8e-0650Show/hide
Query:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
        +D   K T S L R+L+ C +Q              G  VAAKVP+VERDMCLK F+ALK+CMQNT  LR K
Subjt:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
XP_016899714.1 PREDICTED: uncharacterized protein LOC107990619 [Cucumis melo]4.1e-1061.11Show/hide
Query:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
        MD+  +ATASLL+RVL++CASQ              G  VAAKVPKVERDMCLK F+ALKSCMQNT  LR K
Subjt:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
TrEMBL top hitse value%identityAlignment
A0A0A0LB85 Uncharacterized protein6.8e-1162.5Show/hide
Query:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
        MDR  +ATASLL+RVL++CASQ              G  VAAKVPKVERDMCLK F+ALKSCMQNT  LR K
Subjt:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
A0A1S4DUQ7 uncharacterized protein LOC1079906192.0e-1061.11Show/hide
Query:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
        MD+  +ATASLL+RVL++CASQ              G  VAAKVPKVERDMCLK F+ALKSCMQNT  LR K
Subjt:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
A0A2P6RDE1 Uncharacterized protein7.8e-0755.22Show/hide
Query:  KATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
        K +AS L+R+L+TCA+Q              G  VAAKVP+VERDMCLK F+ALKSCMQN   LR K
Subjt:  KATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
A0A5D2DQH9 Uncharacterized protein1.3e-0650Show/hide
Query:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
        +D   K T S L R+L+ C +Q              G  VAAKVP+VERDMCLK F+ALK+CMQNT  LR K
Subjt:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSK
M5W8A2 Mic1 domain-containing protein1.3e-0653.23Show/hide
Query:  TASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNL
        + S L+R+L+TCA+Q              G  VAAKVP+VERDMCLK F+ALKSCMQN S++
Subjt:  TASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12012.1 conserved peptide upstream open reading frame 205.4e-0846.97Show/hide
Query:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNT
        M      TAS L R+L TC+ Q            + G  VA+KV +VERD+CLK F+ALKSCMQ+T
Subjt:  MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGCAACGTCAAAGCAACAGCTTCCTTGCTCGAACGGGTTCTACTTACTTGCGCATCTCAGTGTTTTCTTAGATGGTTTTTGCTTTTCTCTTTTGGGAATGTTGG
GGTTCGTGTTGCAGCAAAGGTTCCCAAAGTTGAACGTGATATGTGTTTGAAAGGATTTGTTGCTCTGAAATCTTGCATGCAAAATACGTCAAATTTAAGAAGTAAAAAAG
AAAACTTAAGTATACAAGTGAAAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCGCAACGTCAAAGCAACAGCTTCCTTGCTCGAACGGGTTCTACTTACTTGCGCATCTCAGTGTTTTCTTAGATGGTTTTTGCTTTTCTCTTTTGGGAATGTTGG
GGTTCGTGTTGCAGCAAAGGTTCCCAAAGTTGAACGTGATATGTGTTTGAAAGGATTTGTTGCTCTGAAATCTTGCATGCAAAATACGTCAAATTTAAGAAGTAAAAAAG
AAAACTTAAGTATACAAGTGAAAAACTAAATGAAAAAAGAACTTTAAGCTTCGTTTTAAAAACAAAACTGTCATCAAAGGTGGCTTTCTTTTGTTGAAATATTTGCACTG
AAGTATCGAATGGTTGTTGGATAACTTGGTGGGAAACCATAGGCATCTTTGCTTCACTGAAGAGAACATAATACGTGGAGTTGTATTGGTTGGAGTAGAGAAGTTGGAGA
AATCTTCTACATTCGCGGCATTGAAGCGAACATGAAACATTTCTCAAAGGTTAAAAGGTGACTTGATAGGCTGGAAGACCATCAAGATTACAACCCAGTGCTGGTCTAAG
CAGATCAAGTGCCCTCTCACATGTTTATATGCAATATCCACACTTACGACGTAGAATTCCTCGACCAAGGGGCTTATTTAACAATGACGTATATAAGTTATTGATCTGCC
CAACAGTGGATCAGATCTTCTCATGAAAAACAGTTCCGTTTAATCCTGCTAACATTTATACCACTGATGCAATTACGGAAGTGCCCATTTTATCTATTCAATATTCCTTT
GACTTAAAGATCATTGCAATACAAAGATCATTGCAATACCTAATATCGTTTCGACAAACTTTATCATTGCAATTGTGTTGGGTATTTGGGAAGTTAGAAAATTGAACAGT
TTTTGGAGGATGTAGGCAATGAAGTAGGAAAGGTGTT
Protein sequenceShow/hide protein sequence
MDRNVKATASLLERVLLTCASQCFLRWFLLFSFGNVGVRVAAKVPKVERDMCLKGFVALKSCMQNTSNLRSKKENLSIQVKN