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Sed0004848 (gene) of Chayote v1 genome

Gene IDSed0004848
OrganismSechium edule (Chayote v1)
DescriptionEndoplasmic reticulum transmembrane protein
Genome locationLG03:509105..511031
RNA-Seq ExpressionSed0004848
SyntenySed0004848
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0070973 - protein localization to endoplasmic reticulum exit site (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008417 - B-cell receptor-associated protein 29/31


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033051.1 hypothetical protein SDJN02_07104 [Cucurbita argyrosperma subsp. argyrosperma]8.7e-4479.03Show/hide
Query:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL
        MI VV  LVL EMA+I  LLFRTPFR L+I G D+LKQGRGPLV++TVAATMLV+FAST+YNAAEIRRRTAE+G L+ TDE+LMAHRLLEA++IGFSLFL
Subjt:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL

Query:  LLIIDRIHNYIREIHRLRTNLEER
        +LIIDRIHNYIRE+HRLRTNLE R
Subjt:  LLIIDRIHNYIREIHRLRTNLEER

XP_008458888.1 PREDICTED: uncharacterized protein LOC103498158 [Cucumis melo]7.6e-4078.05Show/hide
Query:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL
        MI VVL LVLAEMA+I ALLF+ P RNL++KG D+LKQGRGPLV K+VAATMLVVFAS +YNAA IR R AE GILN TDEILMA+RLLE   IGFSLFL
Subjt:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL

Query:  LLIIDRIHNYIREIHRLRTNLEE
         LIIDRIHNYIRE+HRLRT LEE
Subjt:  LLIIDRIHNYIREIHRLRTNLEE

XP_011655362.1 uncharacterized protein LOC101213037 isoform X1 [Cucumis sativus]3.4e-4075.81Show/hide
Query:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL
        MI V L LVLAEMA+I ALLF+ P RNL++KG D+LKQGRGPLV+K+VAATMLVVFAS +YNAA I RR AE+GILN TDEIL+A+RLLE   IGFSLFL
Subjt:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL

Query:  LLIIDRIHNYIREIHRLRTNLEER
         LIIDRIHNYIRE+HRLR  LEER
Subjt:  LLIIDRIHNYIREIHRLRTNLEER

XP_022954156.1 uncharacterized protein LOC111456500 isoform X1 [Cucurbita moschata]1.5e-4379.03Show/hide
Query:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL
        MI VV  LVL EMA+I  LLFRTPFR L+I G D+LKQGRGPLV+KTVAATMLV+FAST+YNAAEI RRTAE+G L+ TDE+LMAHRLLEA++IGFSLFL
Subjt:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL

Query:  LLIIDRIHNYIREIHRLRTNLEER
        +LIIDRIHNYIRE+HRLRTNLE R
Subjt:  LLIIDRIHNYIREIHRLRTNLEER

XP_022990643.1 uncharacterized protein LOC111487467 isoform X1 [Cucurbita maxima]8.7e-4479.03Show/hide
Query:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL
        MI VV  LVL EMA+I  LLFRTPFR L+I G D+LKQGRGPL++KTVAATMLV+FAST+YNAAEIRRRTAE+G L+ TDE+LMAHRLLEA++IGFSLFL
Subjt:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL

Query:  LLIIDRIHNYIREIHRLRTNLEER
        +LIIDRIHNYIRE+HRLRTNLE R
Subjt:  LLIIDRIHNYIREIHRLRTNLEER

TrEMBL top hitse value%identityAlignment
A0A0A0KNS5 Endoplasmic reticulum transmembrane protein1.7e-4075.81Show/hide
Query:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL
        MI V L LVLAEMA+I ALLF+ P RNL++KG D+LKQGRGPLV+K+VAATMLVVFAS +YNAA I RR AE+GILN TDEIL+A+RLLE   IGFSLFL
Subjt:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL

Query:  LLIIDRIHNYIREIHRLRTNLEER
         LIIDRIHNYIRE+HRLR  LEER
Subjt:  LLIIDRIHNYIREIHRLRTNLEER

A0A1S3C8X1 Endoplasmic reticulum transmembrane protein3.7e-4078.05Show/hide
Query:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL
        MI VVL LVLAEMA+I ALLF+ P RNL++KG D+LKQGRGPLV K+VAATMLVVFAS +YNAA IR R AE GILN TDEILMA+RLLE   IGFSLFL
Subjt:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL

Query:  LLIIDRIHNYIREIHRLRTNLEE
         LIIDRIHNYIRE+HRLRT LEE
Subjt:  LLIIDRIHNYIREIHRLRTNLEE

A0A2C9UDV8 Endoplasmic reticulum transmembrane protein2.8e-3262.6Show/hide
Query:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL
        MI V+  LV  EMA+I ALLFRTP RNL+I G D+LK+GRGPLV KTVAAT+L VF++ +Y+  EIR+R  E+G+LN TDE+LMA RLLEA+++GFSLFL
Subjt:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL

Query:  LLIIDRIHNYIREIHRLRTNLEE
         ++ DR+H YIRE++RLR  LE+
Subjt:  LLIIDRIHNYIREIHRLRTNLEE

A0A6J1GQ35 Endoplasmic reticulum transmembrane protein7.2e-4479.03Show/hide
Query:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL
        MI VV  LVL EMA+I  LLFRTPFR L+I G D+LKQGRGPLV+KTVAATMLV+FAST+YNAAEI RRTAE+G L+ TDE+LMAHRLLEA++IGFSLFL
Subjt:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL

Query:  LLIIDRIHNYIREIHRLRTNLEER
        +LIIDRIHNYIRE+HRLRTNLE R
Subjt:  LLIIDRIHNYIREIHRLRTNLEER

A0A6J1JTW1 Endoplasmic reticulum transmembrane protein4.2e-4479.03Show/hide
Query:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL
        MI VV  LVL EMA+I  LLFRTPFR L+I G D+LKQGRGPL++KTVAATMLV+FAST+YNAAEIRRRTAE+G L+ TDE+LMAHRLLEA++IGFSLFL
Subjt:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL

Query:  LLIIDRIHNYIREIHRLRTNLEER
        +LIIDRIHNYIRE+HRLRTNLE R
Subjt:  LLIIDRIHNYIREIHRLRTNLEER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11905.1 B-cell receptor-associated protein 31-like9.6e-2548.7Show/hide
Query:  LVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFLLLIIDRI
        +VL E+ +I AL F+TP R L+I   D+ K+GRGP+VI+TV+AT++V+  ++VYN   I++R  E G++N TDE++MA  LLE+ ++G  LFL L+IDR+
Subjt:  LVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFLLLIIDRI

Query:  HNYIREIHRLRTNLE
        H+Y+RE+   R N+E
Subjt:  HNYIREIHRLRTNLE

AT1G11905.2 B-cell receptor-associated protein 31-like9.3e-2044.35Show/hide
Query:  LVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFLLLIIDRI
        +VL E+ +I AL F+TP R L+I   D+ K+GRGP+VI+TV+AT++V+  ++VYN   I++R  E G++N TDE++MA  LLE+ ++   L L L++  +
Subjt:  LVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFLLLIIDRI

Query:  HNYIREIHRLRTNLE
        H+Y+RE+   R N+E
Subjt:  HNYIREIHRLRTNLE

AT3G20450.1 B-cell receptor-associated protein 31-like2.6e-2247.97Show/hide
Query:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAES-GILNHTDEILMAHRLLEAAIIGFSLF
        M  ++  +V  E  +I  L F TP R +V+K  D  KQGR PLV KTVAATMLV+F S +++  +I  R +ES G+ N TD+++ A+RLLEA ++G  LF
Subjt:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAES-GILNHTDEILMAHRLLEAAIIGFSLF

Query:  LLLIIDRIHNYIREIHRLRTNLE
        L ++IDR+H Y RE+   R NLE
Subjt:  LLLIIDRIHNYIREIHRLRTNLE

AT5G42570.1 B-cell receptor-associated 31-like1.2e-2748.36Show/hide
Query:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL
        MI ++  ++ AEMA+I  LLF+TP R L+I  FD++K+GRGP+V+KT+  T+ VV  S++Y+   I+RR+ +  +LN TD++L +  LLEA+++GF LFL
Subjt:  MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFL

Query:  LLIIDRIHNYIREIHRLRTNLE
         L+IDR+H+YIRE+  LR  +E
Subjt:  LLIIDRIHNYIREIHRLRTNLE

AT5G48660.1 B-cell receptor-associated protein 31-like1.5e-1739.34Show/hide
Query:  MIGVVLYLVLAEMAMIFALLFRT-PFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLF
        MI ++  ++  E A+ F LL +  P R LVIK  D++K G+GP  +KT+A TM V+  S + +  +I+ + A+ G ++  D++L    LLEA+++G  LF
Subjt:  MIGVVLYLVLAEMAMIFALLFRT-PFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLF

Query:  LLLIIDRIHNYIREIHRLRTNL
        L  IIDR+H+Y+R++  LR+N+
Subjt:  LLLIIDRIHNYIREIHRLRTNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGAGTAGTGCTGTACCTGGTATTGGCCGAGATGGCCATGATTTTCGCGTTACTGTTCAGAACTCCGTTCAGGAATCTCGTAATTAAGGGCTTCGACAAATTGAA
GCAGGGGAGAGGGCCGCTGGTGATCAAGACCGTCGCCGCCACGATGCTGGTGGTCTTCGCCTCAACCGTTTACAATGCGGCTGAAATCCGCCGGCGGACGGCGGAATCCG
GCATCCTCAACCACACGGACGAGATTCTCATGGCTCATCGCCTTCTCGAAGCCGCCATCATCGGGTTCTCGCTATTCCTTCTGTTGATTATAGACCGAATACATAATTAT
ATTAGAGAGATTCATCGACTTAGAACCAATTTGGAAGAAAGACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCGGAGTAGTGCTGTACCTGGTATTGGCCGAGATGGCCATGATTTTCGCGTTACTGTTCAGAACTCCGTTCAGGAATCTCGTAATTAAGGGCTTCGACAAATTGAA
GCAGGGGAGAGGGCCGCTGGTGATCAAGACCGTCGCCGCCACGATGCTGGTGGTCTTCGCCTCAACCGTTTACAATGCGGCTGAAATCCGCCGGCGGACGGCGGAATCCG
GCATCCTCAACCACACGGACGAGATTCTCATGGCTCATCGCCTTCTCGAAGCCGCCATCATCGGGTTCTCGCTATTCCTTCTGTTGATTATAGACCGAATACATAATTAT
ATTAGAGAGATTCATCGACTTAGAACCAATTTGGAAGAAAGACTCTAA
Protein sequenceShow/hide protein sequence
MIGVVLYLVLAEMAMIFALLFRTPFRNLVIKGFDKLKQGRGPLVIKTVAATMLVVFASTVYNAAEIRRRTAESGILNHTDEILMAHRLLEAAIIGFSLFLLLIIDRIHNY
IREIHRLRTNLEERL