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Sed0004855 (gene) of Chayote v1 genome

Gene IDSed0004855
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:10152090..10152480
RNA-Seq ExpressionSed0004855
SyntenySed0004855
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022043.1 hypothetical protein SDJN02_15772, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-1645.62Show/hide
Query:  RENKNERERMWKLEWSEARKRTMEEQAKAELESLQLL-------------------------QSDPFFHHP-------KRSPMSPALESQESSSCRKRRK
        REN+  RERM  LEWSEARKR +E+QAKAELESLQLL                         +S+  FH P       +RSP + A +SQESSSCRKRRK
Subjt:  RENKNERERMWKLEWSEARKRTMEEQAKAELESLQLL-------------------------QSDPFFHHP-------KRSPMSPALESQESSSCRKRRK

Query:  ------------------------------KDRVEEVLERAVGCLRKIRRFKTALFSTAD
                                      +DRV+ VLERAV CLRKI+RFKTAL STAD
Subjt:  ------------------------------KDRVEEVLERAVGCLRKIRRFKTALFSTAD

XP_022933880.1 uncharacterized protein LOC111441161 isoform X2 [Cucurbita moschata]1.3e-1344.37Show/hide
Query:  MWKLEWSEARKRTMEEQAKAELESLQLL-------------------------QSDPFFHHP-------KRSPMSPALESQESSSCRKRRK---------
        M  LEWSEARKR +E+QAKAELESLQLL                         +S+  FH P       +RSP + A +SQESSSCRKRRK         
Subjt:  MWKLEWSEARKRTMEEQAKAELESLQLL-------------------------QSDPFFHHP-------KRSPMSPALESQESSSCRKRRK---------

Query:  ---------------------KDRVEEVLERAVGCLRKIRRFKTALFSTAD
                             +DRV+ VLERAV CLRKI+RFKTAL STAD
Subjt:  ---------------------KDRVEEVLERAVGCLRKIRRFKTALFSTAD

XP_022968454.1 uncharacterized protein LOC111467682 isoform X2 [Cucurbita maxima]5.8e-1445.95Show/hide
Query:  MWKLEWSEARKRTMEEQAKAELESLQLL-----------------------QSDPFFHHP-------KRSPMSPALESQESSSCRKRRK-----------
        M  LEWSEARKR +E+QAKAELESLQLL                       QS+  FH P       +RSP S A +SQESSSCRKRRK           
Subjt:  MWKLEWSEARKRTMEEQAKAELESLQLL-----------------------QSDPFFHHP-------KRSPMSPALESQESSSCRKRRK-----------

Query:  -------------------KDRVEEVLERAVGCLRKIRRFKTALFSTA
                           +DRV+ VLERAV CLRKI+RFKTAL STA
Subjt:  -------------------KDRVEEVLERAVGCLRKIRRFKTALFSTA

XP_023531053.1 uncharacterized protein LOC111793421 [Cucurbita pepo subsp. pepo]1.5e-1445.7Show/hide
Query:  MWKLEWSEARKRTMEEQAKAELESLQLL-------------------------QSDPFFHHP-------KRSPMSPALESQESSSCRKRRK---------
        M  LEWSEARKR +E+QAKAELESLQLL                         QS+  FH P       +RSP S A +SQESSSCRKRRK         
Subjt:  MWKLEWSEARKRTMEEQAKAELESLQLL-------------------------QSDPFFHHP-------KRSPMSPALESQESSSCRKRRK---------

Query:  ---------------------KDRVEEVLERAVGCLRKIRRFKTALFSTAD
                             +DRV+ VLERAV CLRKI+RFKTAL STAD
Subjt:  ---------------------KDRVEEVLERAVGCLRKIRRFKTALFSTAD

XP_038878738.1 uncharacterized protein LOC120070912 [Benincasa hispida]1.1e-1246Show/hide
Query:  VQRENKNERERMWKLEWSEARKRTMEEQAKAELESLQLL---------------------QSDPFFHHP--------KRSPMSPALESQESSSCRKR---
        V REN+  RE M  LEWS++RK+ +EEQA AELESLQLL                     QS+  F  P          SP S A +SQESSSCRKR   
Subjt:  VQRENKNERERMWKLEWSEARKRTMEEQAKAELESLQLL---------------------QSDPFFHHP--------KRSPMSPALESQESSSCRKR---

Query:  -------------------RKKDRVEEVLERAVGCLRKIRRFKTALFSTA
                           R+KDRV+ VLERA  CL KIRRFKTALFSTA
Subjt:  -------------------RKKDRVEEVLERAVGCLRKIRRFKTALFSTA

TrEMBL top hitse value%identityAlignment
A0A6J1DT63 uncharacterized protein LOC1110240841.1e-1043.06Show/hide
Query:  MWKLEWSEARKRTMEEQAKAELESLQLLQSDPFFH-------------------HP------KRSPMSPALESQESSSCRKRRK----------------
        M  LEW + RKR +EEQA  ELE+LQLL  D F +                   HP      K SP S A +SQESSSCRKRRK                
Subjt:  MWKLEWSEARKRTMEEQAKAELESLQLLQSDPFFH-------------------HP------KRSPMSPALESQESSSCRKRRK----------------

Query:  ---------------KDRVEEVLERAVGCLRKIRRFKTALFSTA
                       ++RV+ VLERAV CLRKIRRFKTALFS A
Subjt:  ---------------KDRVEEVLERAVGCLRKIRRFKTALFSTA

A0A6J1F0Z4 uncharacterized protein LOC111441161 isoform X11.6e-1244.08Show/hide
Query:  MWKLEWSEARKRTMEEQAKAELESLQLL-------------------------QSDPFFHHP-------KRSPMSPALESQ-ESSSCRKRRK--------
        M  LEWSEARKR +E+QAKAELESLQLL                         +S+  FH P       +RSP + A +SQ ESSSCRKRRK        
Subjt:  MWKLEWSEARKRTMEEQAKAELESLQLL-------------------------QSDPFFHHP-------KRSPMSPALESQ-ESSSCRKRRK--------

Query:  ----------------------KDRVEEVLERAVGCLRKIRRFKTALFSTAD
                              +DRV+ VLERAV CLRKI+RFKTAL STAD
Subjt:  ----------------------KDRVEEVLERAVGCLRKIRRFKTALFSTAD

A0A6J1F625 uncharacterized protein LOC111441161 isoform X26.3e-1444.37Show/hide
Query:  MWKLEWSEARKRTMEEQAKAELESLQLL-------------------------QSDPFFHHP-------KRSPMSPALESQESSSCRKRRK---------
        M  LEWSEARKR +E+QAKAELESLQLL                         +S+  FH P       +RSP + A +SQESSSCRKRRK         
Subjt:  MWKLEWSEARKRTMEEQAKAELESLQLL-------------------------QSDPFFHHP-------KRSPMSPALESQESSSCRKRRK---------

Query:  ---------------------KDRVEEVLERAVGCLRKIRRFKTALFSTAD
                             +DRV+ VLERAV CLRKI+RFKTAL STAD
Subjt:  ---------------------KDRVEEVLERAVGCLRKIRRFKTALFSTAD

A0A6J1HY07 uncharacterized protein LOC111467682 isoform X17.0e-1345.64Show/hide
Query:  MWKLEWSEARKRTMEEQAKAELESLQLL-----------------------QSDPFFHHP-------KRSPMSPALESQ-ESSSCRKRRK----------
        M  LEWSEARKR +E+QAKAELESLQLL                       QS+  FH P       +RSP S A +SQ ESSSCRKRRK          
Subjt:  MWKLEWSEARKRTMEEQAKAELESLQLL-----------------------QSDPFFHHP-------KRSPMSPALESQ-ESSSCRKRRK----------

Query:  --------------------KDRVEEVLERAVGCLRKIRRFKTALFSTA
                            +DRV+ VLERAV CLRKI+RFKTAL STA
Subjt:  --------------------KDRVEEVLERAVGCLRKIRRFKTALFSTA

A0A6J1HZP5 uncharacterized protein LOC111467682 isoform X22.8e-1445.95Show/hide
Query:  MWKLEWSEARKRTMEEQAKAELESLQLL-----------------------QSDPFFHHP-------KRSPMSPALESQESSSCRKRRK-----------
        M  LEWSEARKR +E+QAKAELESLQLL                       QS+  FH P       +RSP S A +SQESSSCRKRRK           
Subjt:  MWKLEWSEARKRTMEEQAKAELESLQLL-----------------------QSDPFFHHP-------KRSPMSPALESQESSSCRKRRK-----------

Query:  -------------------KDRVEEVLERAVGCLRKIRRFKTALFSTA
                           +DRV+ VLERAV CLRKI+RFKTAL STA
Subjt:  -------------------KDRVEEVLERAVGCLRKIRRFKTALFSTA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCCAGAGAGAGAACAAAAATGAGAGAGAGAGAATGTGGAAGTTGGAATGGAGCGAAGCGAGGAAGAGGACGATGGAAGAACAAGCGAAGGCAGAACTGGAATC
CCTCCAACTTCTCCAATCGGACCCGTTCTTCCACCATCCCAAACGCTCGCCCATGTCTCCCGCCCTCGAATCGCAAGAGTCCAGTAGTTGCAGGAAGAGGAGGAAGAAGG
ACCGAGTGGAAGAGGTTCTGGAAAGAGCTGTCGGTTGTCTCCGGAAGATTCGACGCTTCAAAACGGCTCTCTTTTCCACCGCCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCCAGAGAGAGAACAAAAATGAGAGAGAGAGAATGTGGAAGTTGGAATGGAGCGAAGCGAGGAAGAGGACGATGGAAGAACAAGCGAAGGCAGAACTGGAATC
CCTCCAACTTCTCCAATCGGACCCGTTCTTCCACCATCCCAAACGCTCGCCCATGTCTCCCGCCCTCGAATCGCAAGAGTCCAGTAGTTGCAGGAAGAGGAGGAAGAAGG
ACCGAGTGGAAGAGGTTCTGGAAAGAGCTGTCGGTTGTCTCCGGAAGATTCGACGCTTCAAAACGGCTCTCTTTTCCACCGCCGATTGA
Protein sequenceShow/hide protein sequence
MEVQRENKNERERMWKLEWSEARKRTMEEQAKAELESLQLLQSDPFFHHPKRSPMSPALESQESSSCRKRRKKDRVEEVLERAVGCLRKIRRFKTALFSTAD