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Sed0004860 (gene) of Chayote v1 genome

Gene IDSed0004860
OrganismSechium edule (Chayote v1)
Descriptioncytochrome b-c1 complex subunit 8-like
Genome locationLG03:43036529..43039611
RNA-Seq ExpressionSed0004860
SyntenySed0004860
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR020101 - Cytochrome b-c1 complex subunit 8, plants
IPR036642 - Cytochrome b-c1 complex subunit 8 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142978.1 cytochrome b-c1 complex subunit 8 [Cucumis sativus]2.5e-2786.11Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + MKAVVYALSPFQQK MSGLWNDL+GKIHHKISENWISAALLITPVV +Y+Y QQYKE EKLSHRY
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

XP_022131282.1 cytochrome b-c1 complex subunit 8-like [Momordica charantia]1.9e-2784.72Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + MKAVVYALSPFQQK M+GLWNDLTGKIHHKISENWISA LL+TPVV TY+YAQQYKE EKL+HRY
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

XP_022951208.1 cytochrome b-c1 complex subunit 8-like [Cucurbita moschata]1.6e-2990.28Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + MKAV+YALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVV TY+YAQQ+KENEKLSHRY
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

XP_022961649.1 cytochrome b-c1 complex subunit 8-like [Cucurbita moschata]1.6e-2990.28Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + MKAV+YALSPFQQKTMSGLWNDLTGKIHHKISENWISA LLITPVV TY+YAQQYKENEKLSHRY
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

XP_038886592.1 cytochrome b-c1 complex subunit 8-like [Benincasa hispida]2.9e-2887.5Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + MKAV+YALSPFQQK M+GLWNDL GKIHHKISENWISAALLITPVV TY+YAQQYKENEKLSHRY
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

TrEMBL top hitse value%identityAlignment
A0A6J1BQK7 cytochrome b-c1 complex subunit 8-like9.2e-2884.72Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + MKAVVYALSPFQQK M+GLWNDLTGKIHHKISENWISA LL+TPVV TY+YAQQYKE EKL+HRY
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

A0A6J1GH36 cytochrome b-c1 complex subunit 8-like7.5e-3090.28Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + MKAV+YALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVV TY+YAQQ+KENEKLSHRY
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

A0A6J1HEN4 cytochrome b-c1 complex subunit 8-like7.5e-3090.28Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + MKAV+YALSPFQQKTMSGLWNDLTGKIHHKISENWISA LLITPVV TY+YAQQYKENEKLSHRY
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

A0A6J1K5M6 cytochrome b-c1 complex subunit 8-like7.5e-3090.28Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + MKAV+YALSPFQQKTMSGLWNDLTGKIHHKISENWISA LLITPVV TY+YAQQYKENEKLSHRY
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

A0A6J1KUK4 cytochrome b-c1 complex subunit 8-like7.5e-3090.28Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + MKAV+YALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVV TY+YAQQ+KENEKLSHRY
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

SwissProt top hitse value%identityAlignment
P46269 Cytochrome b-c1 complex subunit 89.2e-2570.83Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + +KAVVYA+SPFQQK M GLW DL GKIHHK+SENWISA LL+ P+V TYSY Q + E EKL HRY
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

Q9FLB7 Cytochrome b-c1 complex subunit 8-2, mitochondrial4.1e-2572.22Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + +KAVVYALSPFQQK M+GLW DL  KIHHK+SENWIS  LL+ PVV TYSYAQ +KE EKL HR+
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

Q9SG91 Cytochrome b-c1 complex subunit 8-1, mitochondrial1.9e-2573.61Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + +KAVVYALSPFQQK M+GLW DL  KIHHK+SENWISA LL+TPVV TY YAQ +KE EKL HR+
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

Arabidopsis top hitse value%identityAlignment
AT3G10860.1 Cytochrome b-c1 complex, subunit 8 protein1.3e-2673.61Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + +KAVVYALSPFQQK M+GLW DL  KIHHK+SENWISA LL+TPVV TY YAQ +KE EKL HR+
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY

AT5G05370.1 Cytochrome b-c1 complex, subunit 8 protein2.9e-2672.22Show/hide
Query:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY
        MGKQ + +KAVVYALSPFQQK M+GLW DL  KIHHK+SENWIS  LL+ PVV TYSYAQ +KE EKL HR+
Subjt:  MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGCAACGGATCCCAATGAAGGCTGTGGTCTACGCCCTGTCGCCGTTCCAGCAGAAAACCATGTCCGGGTTATGGAACGATTTGACCGGCAAGATTCACCATAA
GATCTCCGAGAACTGGATCAGTGCCGCCCTCCTAATCACTCCCGTTGTCGCCACCTACTCGTACGCGCAGCAGTACAAGGAGAACGAAAAGTTGTCCCACAGGTACTGA
mRNA sequenceShow/hide mRNA sequence
AAAATATAAAATACATTTATATGTGTTAAAAAAACGCAATACGGTTTGTGAAGCGTCCGATGTGGGAAAATCCAACGGTGAGGGCTAGTATTCAAATACTTGCCTTCGAT
TTGGCAACAAGAACACCCCTTTCGATTGAGAAGCCGAGCCGCCATCTTCATCACAATCGCCTGACACATTCGATTGCAGCGTTTGAATTTGCAGAATTAAGGTAACCATG
GGGAAGCAACGGATCCCAATGAAGGCTGTGGTCTACGCCCTGTCGCCGTTCCAGCAGAAAACCATGTCCGGGTTATGGAACGATTTGACCGGCAAGATTCACCATAAGAT
CTCCGAGAACTGGATCAGTGCCGCCCTCCTAATCACTCCCGTTGTCGCCACCTACTCGTACGCGCAGCAGTACAAGGAGAACGAAAAGTTGTCCCACAGGTACTGAAACC
GCCTGATCCCTGGATTTGCCATCTACCTTGAACAACTTTTGAACTTCATACTTTTTTTGGTATTTTCTTTATGCAAATGGAGCTCTGGGTTCTTTGACTATGAATGAGGA
CGTGTTTTAGTTTTGAGAAACGTTTTCTCGCTTATTTGTTTGAATAAATTACAACATTTGTTATCATGTGAGTGATGGAGGATTATTATAAAATGATCAAACTTTAGACT
CCGATGATTTAACTTGATATCAGTCCTCCTATTGATCTTTT
Protein sequenceShow/hide protein sequence
MGKQRIPMKAVVYALSPFQQKTMSGLWNDLTGKIHHKISENWISAALLITPVVATYSYAQQYKENEKLSHRY