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Sed0004880 (gene) of Chayote v1 genome

Gene IDSed0004880
OrganismSechium edule (Chayote v1)
DescriptionZf-CCHC domain-containing protein/UBN2 domain-containing protein
Genome locationLG05:9091034..9092230
RNA-Seq ExpressionSed0004880
SyntenySed0004880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046182.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]4.1e-2039Show/hide
Query:  EVEKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSK------------------------------------
        E E E  +   L LM  S     E+  +DEVT EP S +ELF+ FE++Q+DLEKL SKYV L K                                    
Subjt:  EVEKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSK------------------------------------

Query:  -----NDKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKELEIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIENLSSSSKNIFVKGTPCMSK
             N+K +L+DK++FLE DS  K++L+ +LKE E+   ++L+ AKE+I+KLTI AQ+LDK I++ K+   K+SLGY  E+ + SSK  FVK +P + K
Subjt:  -----NDKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKELEIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIENLSSSSKNIFVKGTPCMSK

KAA0051650.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]5.9e-1130.58Show/hide
Query:  KLELNIESLTFNAKALNIIYCALDRKIFDIISHFEYAYDVWNFLENMYSVENSPSISNDLFDVKENYNSQNQEIIHEVEKEKCDKPYLCLMANSTNDFDE
        K+ L  ES    + AL  I+  +D K  D +   + AY              S    N  F  ++ Y  ++     E + EK  K    + A     +D+
Subjt:  KLELNIESLTFNAKALNIIYCALDRKIFDIISHFEYAYDVWNFLENMYSVENSPSISNDLFDVKENYNSQNQEIIHEVEKEKCDKPYLCLMANSTNDFDE

Query:  ESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSKNDKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKELEIAKESIRKLTIDAQQLDKTID
         S  +    + +    +  + +  +HD E + SK+V    N+K +L+DK++FLE D   K++L+ +LKE E+   ++L+ AKE+I+KLTI AQ+L + I+
Subjt:  ESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSKNDKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKELEIAKESIRKLTIDAQQLDKTID

Query:  MDKALNMKKSLGYEIENLS--SSSKNIFVKGTPCMSKSVLPH
        + K+   K+ LGY I+ LS  SSSK  FVK +P +    +P+
Subjt:  MDKALNMKKSLGYEIENLS--SSSKNIFVKGTPCMSKSVLPH

XP_022156978.1 uncharacterized protein LOC111023806 [Momordica charantia]2.7e-1945.24Show/hide
Query:  EKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKL------SKNDKFSLIDKIKFLECDSLGKNDLLHMLKEKEM
        E E  +    C MA+S     E+  +DEV  +PLSYDELF+AFE+MQ++LEKL SKYV L      S ++  SL D I  L+ +    ++L+ +LK+ E 
Subjt:  EKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKL------SKNDKFSLIDKIKFLECDSLGKNDLLHMLKEKEM

Query:  MATKELEIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIENLS-SSSKNIFVKGTPCMSKSVLP
         A  EL+ AK+ I++LTI AQ+LDK I+  K    K+ LGY  E  + SSSK IFVK +P M K V P
Subjt:  MATKELEIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIENLS-SSSKNIFVKGTPCMSKSVLP

XP_022158792.1 uncharacterized protein LOC111025259 [Momordica charantia]1.4e-1239.51Show/hide
Query:  EKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSKNDKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKEL
        E E  +    C MA+S     E+  +DE+T +PLSYDELF+AFE+MQ+DLEKLV                                            EL
Subjt:  EKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSKNDKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKEL

Query:  EIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIE-NLSSSSKNIFVKGTPCMSKSVLP
        + AK+SI+KLTI AQ+LDK I++ K    K+ LGY  E +  SSSK IFVK +P M K V P
Subjt:  EIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIE-NLSSSSKNIFVKGTPCMSKSVLP

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]1.3e-2142.11Show/hide
Query:  EVEKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSKN-----------------------------------
        E E E  +   L LMA+S  D D+E D D+VT EPLS DELF+ FESMQ+DLEKL SKYV L K                                    
Subjt:  EVEKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSKN-----------------------------------

Query:  -----DKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKELEIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIENLS-SSSKNIFVKGTPCMSK
             +K +L+DK++FLE DS  K++L+ +LKE E+   +EL+ AKE+I+KLTI AQ+LDK I++ K+   K+ LGY  E+ + SSSK  FVK +P + K
Subjt:  -----DKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKELEIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIENLS-SSSKNIFVKGTPCMSK

Query:  -SVLPHASN
         ++  H SN
Subjt:  -SVLPHASN

TrEMBL top hitse value%identityAlignment
A0A1Q3BU93 DUF4219 domain-containing protein4.9e-1125.67Show/hide
Query:  PPFFDGLNYYVWKNRIKTF------------MFGMNFNILYVCEHDLPKLELNIESLTFNAKALNIIYCALDRKIFDIISHFEYAYDVWNFLENMYSVEN
        PPFFDG +Y  WK ++ TF            +FG+     Y+ +  +   E   E L  NAKA +II+CAL    FD IS  E A ++W+ LE+ +  +N
Subjt:  PPFFDGLNYYVWKNRIKTF------------MFGMNFNILYVCEHDLPKLELNIESLTFNAKALNIIYCALDRKIFDIISHFEYAYDVWNFLENMYSVEN

Query:  SPSISNDLFDVKENYNSQNQEIIHEVEKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKL-------------VSKYVKLS
           +++                              CLMA   +D  E++ E+EV     ++DEL +A+E++  + E +             +S  ++ S
Subjt:  SPSISNDLFDVKENYNSQNQEIIHEVEKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKL-------------VSKYVKLS

Query:  KNDKFSLIDKIKFLE---CDSLGKNDLLHM--------LKEKEMMATKELEIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIENLSSSSKNIFVK
        KN+    + +I+ L+   C  + + D+L++        L+E E +   E++  K++  K +  + +LD  + + + +  K  LGY+        KN FVK
Subjt:  KNDKFSLIDKIKFLE---CDSLGKNDLLHM--------LKEKEMMATKELEIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIENLSSSSKNIFVK

A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein2.0e-2039Show/hide
Query:  EVEKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSK------------------------------------
        E E E  +   L LM  S     E+  +DEVT EP S +ELF+ FE++Q+DLEKL SKYV L K                                    
Subjt:  EVEKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSK------------------------------------

Query:  -----NDKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKELEIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIENLSSSSKNIFVKGTPCMSK
             N+K +L+DK++FLE DS  K++L+ +LKE E+   ++L+ AKE+I+KLTI AQ+LDK I++ K+   K+SLGY  E+ + SSK  FVK +P + K
Subjt:  -----NDKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKELEIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIENLSSSSKNIFVKGTPCMSK

A0A5A7U923 Zf-CCHC domain-containing protein/UBN2 domain-containing protein2.9e-1130.58Show/hide
Query:  KLELNIESLTFNAKALNIIYCALDRKIFDIISHFEYAYDVWNFLENMYSVENSPSISNDLFDVKENYNSQNQEIIHEVEKEKCDKPYLCLMANSTNDFDE
        K+ L  ES    + AL  I+  +D K  D +   + AY              S    N  F  ++ Y  ++     E + EK  K    + A     +D+
Subjt:  KLELNIESLTFNAKALNIIYCALDRKIFDIISHFEYAYDVWNFLENMYSVENSPSISNDLFDVKENYNSQNQEIIHEVEKEKCDKPYLCLMANSTNDFDE

Query:  ESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSKNDKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKELEIAKESIRKLTIDAQQLDKTID
         S  +    + +    +  + +  +HD E + SK+V    N+K +L+DK++FLE D   K++L+ +LKE E+   ++L+ AKE+I+KLTI AQ+L + I+
Subjt:  ESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSKNDKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKELEIAKESIRKLTIDAQQLDKTID

Query:  MDKALNMKKSLGYEIENLS--SSSKNIFVKGTPCMSKSVLPH
        + K+   K+ LGY I+ LS  SSSK  FVK +P +    +P+
Subjt:  MDKALNMKKSLGYEIENLS--SSSKNIFVKGTPCMSKSVLPH

A0A6J1DS74 uncharacterized protein LOC1110238061.3e-1945.24Show/hide
Query:  EKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKL------SKNDKFSLIDKIKFLECDSLGKNDLLHMLKEKEM
        E E  +    C MA+S     E+  +DEV  +PLSYDELF+AFE+MQ++LEKL SKYV L      S ++  SL D I  L+ +    ++L+ +LK+ E 
Subjt:  EKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKL------SKNDKFSLIDKIKFLECDSLGKNDLLHMLKEKEM

Query:  MATKELEIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIENLS-SSSKNIFVKGTPCMSKSVLP
         A  EL+ AK+ I++LTI AQ+LDK I+  K    K+ LGY  E  + SSSK IFVK +P M K V P
Subjt:  MATKELEIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIENLS-SSSKNIFVKGTPCMSKSVLP

A0A6J1DY46 uncharacterized protein LOC1110252596.9e-1339.51Show/hide
Query:  EKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSKNDKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKEL
        E E  +    C MA+S     E+  +DE+T +PLSYDELF+AFE+MQ+DLEKLV                                            EL
Subjt:  EKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSKNDKFSLIDKIKFLECDSLGKNDLLHMLKEKEMMATKEL

Query:  EIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIE-NLSSSSKNIFVKGTPCMSKSVLP
        + AK+SI+KLTI AQ+LDK I++ K    K+ LGY  E +  SSSK IFVK +P M K V P
Subjt:  EIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIE-NLSSSSKNIFVKGTPCMSKSVLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTTTAAATTTTGAAAGTGATTCTAATGATAGACCTCCTTTCTTTGATGGTTTAAATTATTATGTTTGGAAAAATAGAATAAAGACTTTTATGTTTGGTATGAA
TTTTAATATTTTATATGTTTGTGAGCATGATTTACCCAAATTGGAATTGAATATTGAGTCGCTCACTTTTAATGCTAAAGCTTTAAATATTATATATTGTGCATTAGATA
GAAAAATATTTGATATAATTTCACATTTTGAATATGCATATGATGTTTGGAATTTTCTTGAAAACATGTATAGTGTAGAAAATTCTCCTTCTATTTCTAATGATTTATTT
GATGTGAAAGAGAATTACAATTCTCAAAATCAAGAAATTATTCATGAAGTTGAAAAAGAGAAATGTGATAAACCTTATTTATGCTTGATGGCTAATTCAACCAACGATTT
CGATGAGGAAAGCGATGAAGATGAGGTAACTCGAGAACCTCTTTCTTACGATGAGTTATTTGATGCATTTGAAAGCATGCAACATGATTTAGAAAAACTTGTATCTAAAT
ATGTCAAACTATCAAAGAATGATAAATTTTCTTTGATTGACAAAATTAAATTTCTTGAATGTGATAGTCTTGGTAAAAATGATCTTTTGCATATGCTTAAAGAAAAAGAA
ATGATGGCTACTAAAGAACTTGAAATTGCAAAAGAATCCATTAGAAAATTGACTATTGATGCTCAACAATTAGATAAGACTATTGACATGGATAAAGCTTTAAATATGAA
AAAGAGTTTAGGTTATGAGATTGAAAATCTTTCATCTAGCTCTAAGAATATTTTTGTTAAGGGTACTCCTTGTATGTCTAAAAGTGTTTTACCTCATGCGTCTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAACTTTAAATTTTGAAAGTGATTCTAATGATAGACCTCCTTTCTTTGATGGTTTAAATTATTATGTTTGGAAAAATAGAATAAAGACTTTTATGTTTGGTATGAA
TTTTAATATTTTATATGTTTGTGAGCATGATTTACCCAAATTGGAATTGAATATTGAGTCGCTCACTTTTAATGCTAAAGCTTTAAATATTATATATTGTGCATTAGATA
GAAAAATATTTGATATAATTTCACATTTTGAATATGCATATGATGTTTGGAATTTTCTTGAAAACATGTATAGTGTAGAAAATTCTCCTTCTATTTCTAATGATTTATTT
GATGTGAAAGAGAATTACAATTCTCAAAATCAAGAAATTATTCATGAAGTTGAAAAAGAGAAATGTGATAAACCTTATTTATGCTTGATGGCTAATTCAACCAACGATTT
CGATGAGGAAAGCGATGAAGATGAGGTAACTCGAGAACCTCTTTCTTACGATGAGTTATTTGATGCATTTGAAAGCATGCAACATGATTTAGAAAAACTTGTATCTAAAT
ATGTCAAACTATCAAAGAATGATAAATTTTCTTTGATTGACAAAATTAAATTTCTTGAATGTGATAGTCTTGGTAAAAATGATCTTTTGCATATGCTTAAAGAAAAAGAA
ATGATGGCTACTAAAGAACTTGAAATTGCAAAAGAATCCATTAGAAAATTGACTATTGATGCTCAACAATTAGATAAGACTATTGACATGGATAAAGCTTTAAATATGAA
AAAGAGTTTAGGTTATGAGATTGAAAATCTTTCATCTAGCTCTAAGAATATTTTTGTTAAGGGTACTCCTTGTATGTCTAAAAGTGTTTTACCTCATGCGTCTAATTAA
Protein sequenceShow/hide protein sequence
MTTLNFESDSNDRPPFFDGLNYYVWKNRIKTFMFGMNFNILYVCEHDLPKLELNIESLTFNAKALNIIYCALDRKIFDIISHFEYAYDVWNFLENMYSVENSPSISNDLF
DVKENYNSQNQEIIHEVEKEKCDKPYLCLMANSTNDFDEESDEDEVTREPLSYDELFDAFESMQHDLEKLVSKYVKLSKNDKFSLIDKIKFLECDSLGKNDLLHMLKEKE
MMATKELEIAKESIRKLTIDAQQLDKTIDMDKALNMKKSLGYEIENLSSSSKNIFVKGTPCMSKSVLPHASN