; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004902 (gene) of Chayote v1 genome

Gene IDSed0004902
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:2705667..2706388
RNA-Seq ExpressionSed0004902
SyntenySed0004902
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAO45758.1 hypothetical protein [Cucumis melo subsp. melo]2.6e-6263.35Show/hide
Query:  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGG
        +SSS  S F NPLLNF +SNPI  PKSP   T   +S  L  QT  +CAR  KKKR  GFQRS KL L+LASLLA+N+ ILPPPLDLVVAEL GGDGNGG
Subjt:  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGG

Query:  GSRLWRRFGGGGGDGWRGKRK-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAK
        GSRLWR FG G  DGWRGKRK             ++L F+    I+++CG+LGF++F VA IQL  K  ISK FV GFGLF I I LGLRRS+VQKWV K
Subjt:  GSRLWRRFGGGGGDGWRGKRK-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAK

Query:  LGFYSPKMKSLRRKIKGKKIF
        LGFYSPKMKSLRRK+KG++IF
Subjt:  LGFYSPKMKSLRRKIKGKKIF

KAG7030256.1 hypothetical protein SDJN02_08603, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-6263.93Show/hide
Query:  SSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGS
        SS  S F NPLLNF ISNP+I   S    T   +S    AQTSI+CAR  KK+RR  F RS K+ L+LASLLA+NL ILPPPLDLVVAEL GG+GNGGGS
Subjt:  SSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGS

Query:  RLWRRFGGGGGDGWRGKRK---------------IMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAKLG
        RLWRRFGGGG DGWRGKRK               + +F    +D ICG LGF+LF VA IQL  +  ISK FVWGFGLF I I LGLRRS+VQKW  KLG
Subjt:  RLWRRFGGGGGDGWRGKRK---------------IMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAKLG

Query:  FYSPKMKSLRRKIKGKKIF
        FY PKMKSLRRKI+GKKIF
Subjt:  FYSPKMKSLRRKIKGKKIF

XP_008454859.1 PREDICTED: uncharacterized protein LOC103495165 [Cucumis melo]3.1e-6363.8Show/hide
Query:  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGG
        +SSS  S F NPLLNF +SNPI  PKSP   T   +S  L  QT  +CAR  KKKR  GFQRS KL L+LASLLA+N+ ILPPPLDLVVAEL GGDGNGG
Subjt:  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGG

Query:  GSRLWRRFGGGGGDGWRGKRK-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAK
        GSRLWR FGGG  DGWRGKRK             ++L F+    I+++CG+LGF++F VA IQL  K  ISK FV GFGLF I I LGLRRS+VQKWV K
Subjt:  GSRLWRRFGGGGGDGWRGKRK-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAK

Query:  LGFYSPKMKSLRRKIKGKKIF
        LGFYSPKMKSLRRK+KG++IF
Subjt:  LGFYSPKMKSLRRKIKGKKIF

XP_022999122.1 uncharacterized protein LOC111493602 isoform X2 [Cucurbita maxima]1.1e-6063.72Show/hide
Query:  SSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGS
        SS AS F NPLLNF ISNP+I   S    T   +S    AQTSI+CAR  KK+RR  F RS KL L+LASL A+NL ILPPPLDLVVAEL GGDGNGGGS
Subjt:  SSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGS

Query:  RLWRRFGGGGGDGWRGKRK---------------IMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAKLG
        RLWRRFGGGG DGWRGKRK               + +F    +D ICG LGF++F VA IQL  +  ISK FVWGFGLF I I LGLRRS+VQKW  KLG
Subjt:  RLWRRFGGGGGDGWRGKRK---------------IMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAKLG

Query:  FYSPKMKSLRRKIKG
        FY PK+KSLRRKIKG
Subjt:  FYSPKMKSLRRKIKG

XP_038886968.1 uncharacterized protein LOC120077138 [Benincasa hispida]7.8e-6765.37Show/hide
Query:  MQLKIIASSSSSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVA
        MQ   I  SSS S     F NPLLNF +SNPII P+SP   T   +S  L AQTSI+CAR+KKK    GFQRS KL L+LASLL +NL ILPPPLDLVV 
Subjt:  MQLKIIASSSSSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVA

Query:  ELCGGDGNGGGSRLWRRFGGGGGDGWRGKRK--------------IMLFFI-LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLR
        EL GGDGNGGGSRLWR FGGGG DGWRGKRK              ++LF     ID +CGVLGF+LF VA IQL LK  ISK FVWGFGLF I I LGLR
Subjt:  ELCGGDGNGGGSRLWRRFGGGGGDGWRGKRK--------------IMLFFI-LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLR

Query:  RSDVQKWVAKLGFYSPKMKSLRRKIKGKKIF
        RS++QKWV KLG YSPKMKSLRRKI+GKKIF
Subjt:  RSDVQKWVAKLGFYSPKMKSLRRKIKGKKIF

TrEMBL top hitse value%identityAlignment
A0A1S3C0R6 uncharacterized protein LOC1034951651.5e-6363.8Show/hide
Query:  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGG
        +SSS  S F NPLLNF +SNPI  PKSP   T   +S  L  QT  +CAR  KKKR  GFQRS KL L+LASLLA+N+ ILPPPLDLVVAEL GGDGNGG
Subjt:  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGG

Query:  GSRLWRRFGGGGGDGWRGKRK-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAK
        GSRLWR FGGG  DGWRGKRK             ++L F+    I+++CG+LGF++F VA IQL  K  ISK FV GFGLF I I LGLRRS+VQKWV K
Subjt:  GSRLWRRFGGGGGDGWRGKRK-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAK

Query:  LGFYSPKMKSLRRKIKGKKIF
        LGFYSPKMKSLRRK+KG++IF
Subjt:  LGFYSPKMKSLRRKIKGKKIF

A0A5D3D456 Uncharacterized protein1.5e-6363.8Show/hide
Query:  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGG
        +SSS  S F NPLLNF +SNPI  PKSP   T   +S  L  QT  +CAR  KKKR  GFQRS KL L+LASLLA+N+ ILPPPLDLVVAEL GGDGNGG
Subjt:  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGG

Query:  GSRLWRRFGGGGGDGWRGKRK-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAK
        GSRLWR FGGG  DGWRGKRK             ++L F+    I+++CG+LGF++F VA IQL  K  ISK FV GFGLF I I LGLRRS+VQKWV K
Subjt:  GSRLWRRFGGGGGDGWRGKRK-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAK

Query:  LGFYSPKMKSLRRKIKGKKIF
        LGFYSPKMKSLRRK+KG++IF
Subjt:  LGFYSPKMKSLRRKIKGKKIF

A0A6J1K9Z1 uncharacterized protein LOC111493602 isoform X25.3e-6163.72Show/hide
Query:  SSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGS
        SS AS F NPLLNF ISNP+I   S    T   +S    AQTSI+CAR  KK+RR  F RS KL L+LASL A+NL ILPPPLDLVVAEL GGDGNGGGS
Subjt:  SSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGS

Query:  RLWRRFGGGGGDGWRGKRK---------------IMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAKLG
        RLWRRFGGGG DGWRGKRK               + +F    +D ICG LGF++F VA IQL  +  ISK FVWGFGLF I I LGLRRS+VQKW  KLG
Subjt:  RLWRRFGGGGGDGWRGKRK---------------IMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAKLG

Query:  FYSPKMKSLRRKIKG
        FY PK+KSLRRKIKG
Subjt:  FYSPKMKSLRRKIKG

A0A6J1KC74 uncharacterized protein LOC111493602 isoform X16.9e-6163.13Show/hide
Query:  SSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGS
        SS AS F NPLLNF ISNP+I   S    T   +S    AQTSI+CAR  KK+RR  F RS KL L+LASL A+NL ILPPPLDLVVAEL GGDGNGGGS
Subjt:  SSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGS

Query:  RLWRRFGGGGGDGWRGKRK---------------IMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAKLG
        RLWRRFGGGG DGWRGKRK               + +F    +D ICG LGF++F VA IQL  +  ISK FVWGFGLF I I LGLRRS+VQKW  KLG
Subjt:  RLWRRFGGGGGDGWRGKRK---------------IMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAKLG

Query:  FYSPKMKSLRRKIKGKK
        FY PK+KSLRRKIKG +
Subjt:  FYSPKMKSLRRKIKGKK

Q84KA4 Uncharacterized protein1.3e-6263.35Show/hide
Query:  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGG
        +SSS  S F NPLLNF +SNPI  PKSP   T   +S  L  QT  +CAR  KKKR  GFQRS KL L+LASLLA+N+ ILPPPLDLVVAEL GGDGNGG
Subjt:  SSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGG

Query:  GSRLWRRFGGGGGDGWRGKRK-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAK
        GSRLWR FG G  DGWRGKRK             ++L F+    I+++CG+LGF++F VA IQL  K  ISK FV GFGLF I I LGLRRS+VQKWV K
Subjt:  GSRLWRRFGGGGGDGWRGKRK-------------IMLFFI--LAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAK

Query:  LGFYSPKMKSLRRKIKGKKIF
        LGFYSPKMKSLRRK+KG++IF
Subjt:  LGFYSPKMKSLRRKIKGKKIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G27440.1 unknown protein1.5e-1235.26Show/hide
Query:  NFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGS---RL
        +FLNP  +  +S+        I +  + ISH    Q+ ++CA  KK+K+R G++R  +      SLLA NL ILP PLDLV+A+L G DG GGG      
Subjt:  NFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGGGS---RL

Query:  WRRFGGGGGDGWRGKRKIMLFFILAIDDICGVLGFSLFC-VAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRR
        WR  G G  DGWR K+  +   +     +C +L    FC ++ I++  +  +    V G  LF + +V  L+R
Subjt:  WRRFGGGGGDGWRGKRKIMLFFILAIDDICGVLGFSLFC-VAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCTCAAGATCATAGCTTCTTCTTCTTCTTCTTCTTCACGAGCCTCCAATTTCTTGAACCCACTTCTCAATTTCGCCATTTCAAATCCCATAATCAAACCCAAATC
CCCAATTTTCAAGACATTCACACCAATTTCCCACACACTTGCAGCCCAAACATCAATCGTTTGCGCGAGGAGGAAGAAGAAGAAGAGGCGAGCTGGGTTTCAAAGATCAC
CCAAATTGGCGCTTCAATTGGCTTCCCTCTTAGCCGCCAATCTCAACATCTTACCGCCGCCGTTGGATTTGGTTGTCGCGGAATTGTGCGGCGGAGATGGAAACGGAGGT
GGTTCGCGGCTGTGGAGGAGATTTGGCGGAGGCGGCGGAGATGGATGGAGAGGTAAAAGGAAGATTATGCTGTTTTTTATTTTGGCTATCGATGACATTTGTGGGGTTCT
TGGTTTTTCTCTATTTTGTGTTGCATTCATTCAGCTGTTGCTGAAATGTGCGATTTCAAAGGGTTTCGTTTGGGGATTTGGCCTTTTTGCCATTTTTATTGTCCTCGGAT
TGAGAAGATCTGATGTGCAAAAATGGGTTGCAAAATTAGGGTTTTACAGTCCGAAGATGAAGAGTTTAAGAAGGAAAATTAAAGGTAAGAAAATTTTCTGGGAGACCTCT
AGTGTCAGAGATAGAATTAGAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGCTCAAGATCATAGCTTCTTCTTCTTCTTCTTCTTCACGAGCCTCCAATTTCTTGAACCCACTTCTCAATTTCGCCATTTCAAATCCCATAATCAAACCCAAATC
CCCAATTTTCAAGACATTCACACCAATTTCCCACACACTTGCAGCCCAAACATCAATCGTTTGCGCGAGGAGGAAGAAGAAGAAGAGGCGAGCTGGGTTTCAAAGATCAC
CCAAATTGGCGCTTCAATTGGCTTCCCTCTTAGCCGCCAATCTCAACATCTTACCGCCGCCGTTGGATTTGGTTGTCGCGGAATTGTGCGGCGGAGATGGAAACGGAGGT
GGTTCGCGGCTGTGGAGGAGATTTGGCGGAGGCGGCGGAGATGGATGGAGAGGTAAAAGGAAGATTATGCTGTTTTTTATTTTGGCTATCGATGACATTTGTGGGGTTCT
TGGTTTTTCTCTATTTTGTGTTGCATTCATTCAGCTGTTGCTGAAATGTGCGATTTCAAAGGGTTTCGTTTGGGGATTTGGCCTTTTTGCCATTTTTATTGTCCTCGGAT
TGAGAAGATCTGATGTGCAAAAATGGGTTGCAAAATTAGGGTTTTACAGTCCGAAGATGAAGAGTTTAAGAAGGAAAATTAAAGGTAAGAAAATTTTCTGGGAGACCTCT
AGTGTCAGAGATAGAATTAGAAATTAG
Protein sequenceShow/hide protein sequence
MQLKIIASSSSSSSRASNFLNPLLNFAISNPIIKPKSPIFKTFTPISHTLAAQTSIVCARRKKKKRRAGFQRSPKLALQLASLLAANLNILPPPLDLVVAELCGGDGNGG
GSRLWRRFGGGGGDGWRGKRKIMLFFILAIDDICGVLGFSLFCVAFIQLLLKCAISKGFVWGFGLFAIFIVLGLRRSDVQKWVAKLGFYSPKMKSLRRKIKGKKIFWETS
SVRDRIRN