CuGenDBv2

Gene ID	Sed0004927
Organism	Sechium edule (Chayote v1)
Description	disease resistance protein RGA2-like
Genome location	LG01:2919874..2922372
RNA-Seq Expression	Sed0004927
Synteny	Sed0004927
Gene Ontology terms	NA
InterPro domains	IPR041118 - Rx, N-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AAS80152.1 FOM-2 [Cucumis melo]

9.4e-23

47.13

Show/hide

Query:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------
        + L+KL+K LL+AEA L +INTRK+ HDSVR+WVDDL+ LVYQADDLLDEIVYEHLRQKVQ  K K                                  
Subjt:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------

Query:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ
                              Q+RET SEL+++++VGRDVEVES+ KQVIDASN Q
Subjt:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ

KAA0042414.1 disease resistance protein RGA2-like [Cucumis melo var. makuwa]

9.4e-23

47.13

Show/hide

Query:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------
        + L+KL+K LL+AEA L DINTRK+ HDSVR+WVDDL+ LVYQADDLLDEIVYEHLRQKV   K K                                  
Subjt:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------

Query:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ
                              Q+RET SEL+++++VGRDVEVES+ KQVIDASN Q
Subjt:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ

TYK06492.1 putative disease resistance protein RGA3 [Cucumis melo var. makuwa]

9.4e-23

47.13

Show/hide

Query:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------
        + L+KL+K LL+AEA L +INTRK+ HDSVR+WVDDL+ LVYQADDLLDEIVYEHLRQKVQ  K K                                  
Subjt:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------

Query:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ
                              Q+RET SEL+++++VGRDVEVES+ KQVIDASN Q
Subjt:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ

XP_008459150.1 PREDICTED: putative disease resistance protein RGA3 [Cucumis melo]

9.4e-23

47.13

Show/hide

Query:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------
        + L+KL+K LL+AEA L +INTRK+ HDSVR+WVDDL+ LVYQADDLLDEIVYEHLRQKVQ  K K                                  
Subjt:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------

Query:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ
                              Q+RET SEL+++++VGRDVEVES+ KQVIDASN Q
Subjt:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ

XP_008462780.1 PREDICTED: disease resistance protein RGA2-like [Cucumis melo]

9.4e-23

47.13

Show/hide

Query:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------
        + L+KL+K LL+AEA L DINTRK+ HDSVR+WVDDL+ LVYQADDLLDEIVYEHLRQKV   K K                                  
Subjt:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------

Query:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ
                              Q+RET SEL+++++VGRDVEVES+ KQVIDASN Q
Subjt:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C9H9 putative disease resistance protein RGA3

4.5e-23

47.13

Show/hide

Query:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------
        + L+KL+K LL+AEA L +INTRK+ HDSVR+WVDDL+ LVYQADDLLDEIVYEHLRQKVQ  K K                                  
Subjt:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------

Query:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ
                              Q+RET SEL+++++VGRDVEVES+ KQVIDASN Q
Subjt:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ

A0A1S3CHQ5 disease resistance protein RGA2-like

4.5e-23

47.13

Show/hide

Query:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------
        + L+KL+K LL+AEA L DINTRK+ HDSVR+WVDDL+ LVYQADDLLDEIVYEHLRQKV   K K                                  
Subjt:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------

Query:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ
                              Q+RET SEL+++++VGRDVEVES+ KQVIDASN Q
Subjt:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ

A0A5A7TG70 Disease resistance protein RGA2-like

4.5e-23

47.13

Show/hide

Query:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------
        + L+KL+K LL+AEA L DINTRK+ HDSVR+WVDDL+ LVYQADDLLDEIVYEHLRQKV   K K                                  
Subjt:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------

Query:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ
                              Q+RET SEL+++++VGRDVEVES+ KQVIDASN Q
Subjt:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ

A0A5D3C5G4 Putative disease resistance protein RGA3

4.5e-23

47.13

Show/hide

Query:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------
        + L+KL+K LL+AEA L +INTRK+ HDSVR+WVDDL+ LVYQADDLLDEIVYEHLRQKVQ  K K                                  
Subjt:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------

Query:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ
                              Q+RET SEL+++++VGRDVEVES+ KQVIDASN Q
Subjt:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ

Q6E436 FOM-2

4.5e-23

47.13

Show/hide

Query:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------
        + L+KL+K LL+AEA L +INTRK+ HDSVR+WVDDL+ LVYQADDLLDEIVYEHLRQKVQ  K K                                  
Subjt:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKK----------------------------------

Query:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ
                              Q+RET SEL+++++VGRDVEVES+ KQVIDASN Q
Subjt:  ----------------------QFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQ

SwissProt top hits

e value

%identity

Alignment

Q9FJK8 Probable disease resistance RPP8-like protein 4

4.5e-04

24.14

Show/hide

Query:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKKQFRETTSELDEYEVVGRDVEVESVAKQVIDASNQ
        E+L  L+++L   ++LL D + +K   D VR +++D++ LV+ A+D+++  V   LR + + G KK  R     L +   V  D  +E + K++ D   +
Subjt:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKKQFRETTSELDEYEVVGRDVEVESVAKQVIDASNQ

Query:  QQKNSKRGVNKSWSTIDPLPSLNRVYQIMVHEERLKSFVLTKEAPIEICGSLLKSNTNHQIEERISIMMGHLCD
         Q    + +      ID + SL+   +  V  E  +++  + E+  ++ G          +E+ +  ++GHL +
Subjt:  QQKNSKRGVNKSWSTIDPLPSLNRVYQIMVHEERLKSFVLTKEAPIEICGSLLKSNTNHQIEERISIMMGHLCD

Arabidopsis top hits

e value

%identity

Alignment

AT1G53350.1 Disease resistance protein (CC-NBS-LRR class) family

8.0e-04

30.23

Show/hide

Query:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKKQFRETTSELDEYEVVGRDVE
        E++  L+++L   ++LL D + +K   + VR +++D++ +VY ADD+++  +   LR K + G KKQ R     L +      D+E
Subjt:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKKQFRETTSELDEYEVVGRDVE

AT5G48620.1 Disease resistance protein (CC-NBS-LRR class) family

3.2e-05

24.14

Show/hide

Query:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKKQFRETTSELDEYEVVGRDVEVESVAKQVIDASNQ
        E+L  L+++L   ++LL D + +K   D VR +++D++ LV+ A+D+++  V   LR + + G KK  R     L +   V  D  +E + K++ D   +
Subjt:  EELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKKQFRETTSELDEYEVVGRDVEVESVAKQVIDASNQ

Query:  QQKNSKRGVNKSWSTIDPLPSLNRVYQIMVHEERLKSFVLTKEAPIEICGSLLKSNTNHQIEERISIMMGHLCD
         Q    + +      ID + SL+   +  V  E  +++  + E+  ++ G          +E+ +  ++GHL +
Subjt:  QQKNSKRGVNKSWSTIDPLPSLNRVYQIMVHEERLKSFVLTKEAPIEICGSLLKSNTNHQIEERISIMMGHLCD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGGAAGAGCTAACCAAACTAAGGAAAGAGCTACTCGAGGCCGAAGCTCTCTTAAGCGATATCAACACCAGGAAGATACCTCATGATTCTGTGCGAATTTGGGTGGA
TGATCTTCAAGTTCTTGTTTATCAAGCCGACGATCTGTTAGATGAAATTGTTTACGAACATCTCCGACAAAAAGTGCAGATCGGAAAGAAGAAGCAGTTTCGAGAGACTA
CTTCAGAGCTTGATGAATATGAAGTCGTGGGAAGGGATGTTGAGGTTGAAAGTGTAGCGAAACAAGTGATTGATGCCAGCAATCAACAGCAAAAGAACTCCAAAAGAGGC
GTGAACAAGAGTTGGTCCACCATTGACCCGTTGCCTTCATTGAACCGAGTATATCAGATCATGGTTCATGAAGAGAGATTGAAAAGTTTTGTTCTCACCAAAGAGGCACC
AATTGAGATATGTGGCTCACTACTCAAATCAAATACAAATCATCAAATCGAGGAAAGGATATCCATAATGATGGGACATTTGTGTGACGAAAAACGAGGTGGTCATGACC
AAAGAACCCAACATAATTGGCATAATGGTGGTCAAGGCCGAGGAGGCGGCTTGAGAGCTAATGCTTCACAAACATCAATAAGATGTGACTCTTGCCACTGCAGAGAGAAA
CCAGATTTTCATTCAATTCTATTGGTATTACGGCTGAACAATGGTATTCCTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGEELTKLRKELLEAEALLSDINTRKIPHDSVRIWVDDLQVLVYQADDLLDEIVYEHLRQKVQIGKKKQFRETTSELDEYEVVGRDVEVESVAKQVIDASNQQQKNSKRG
VNKSWSTIDPLPSLNRVYQIMVHEERLKSFVLTKEAPIEICGSLLKSNTNHQIEERISIMMGHLCDEKRGGHDQRTQHNWHNGGQGRGGGLRANASQTSIRCDSCHCREK
PDFHSILLVLRLNNGIP

Sed0004927 (gene) of Chayote v1 genome