; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004944 (gene) of Chayote v1 genome

Gene IDSed0004944
OrganismSechium edule (Chayote v1)
DescriptionBHLH transcription factor
Genome locationLG08:33575049..33576470
RNA-Seq ExpressionSed0004944
SyntenySed0004944
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR045084 - Transcription factor AIB/MYC-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441948.1 PREDICTED: transcription factor MYC3-like [Cucumis melo]6.7e-2050.71Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELES----EHPRDAGEETSEETEASS-GGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHH
        +S  DKA +LS AVSYINEL+ +I E+ES    +  ++  +E   E EASS     R +E++VK +G D+AVIRVES+NLS+A A+LM ALRDLGLKV H
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELES----EHPRDAGEETSEETEASS-GGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHH

Query:  GNMSNLEDAVTLQTVVVQIPTGLG---SNHIKQALVSKLQ
        G+M N +D +TLQ +VV++P+G G      IK+AL++ L+
Subjt:  GNMSNLEDAVTLQTVVVQIPTGLG---SNHIKQALVSKLQ

XP_020588981.1 transcription factor MYC3-like [Phalaenopsis equestris]2.2e-1846.43Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSG-------GEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKV
        +S  DKA +L+ AVSYI +L+ ++EELE E  R   E   E+  +S G        E   VEVEVK LG D A+IRV+S+NL+H  ARLM ALRDL L V
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSG-------GEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKV

Query:  HHGNMSNLEDAVTLQTVVVQIPTGL-GSNHIKQALVSKLQ
        HH  +S  ++A+ +Q VVV++P  L G  +++ AL+ +LQ
Subjt:  HHGNMSNLEDAVTLQTVVVQIPTGL-GSNHIKQALVSKLQ

XP_023880894.1 transcription factor MYC2-like [Quercus suber]4.8e-1843.92Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGE---------------ETSEETEASSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGA
        +S  DKA +LS AVSYINEL+T+I+ELES+  R++ +                + ++T+ ++   G V+EVEVK +G D A+IR++S+N+++ GARLMGA
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGE---------------ETSEETEASSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGA

Query:  LRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGL-GSNHIKQALVSKLQ
        LRDL  +VHH +MS + + + LQ VVV++P GL G   +K AL+ +L+
Subjt:  LRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGL-GSNHIKQALVSKLQ

XP_031736394.1 transcription factor bHLH14-like [Cucumis sativus]1.1e-1949.3Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELES-------EHPRDAGEETSEETEASSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKV
        +S  DKA +LS AVSYINEL+ +I E+ES       E      E   EE  +S     R +E++VK +G D+AVIRVES+NLS+A A+LM ALRDL LKV
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELES-------EHPRDAGEETSEETEASSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKV

Query:  HHGNMSNLEDAVTLQTVVVQIPTGLG---SNHIKQALVSKLQ
         HG+M NL+D +TLQ +VV++P+G G      IK+AL++ L+
Subjt:  HHGNMSNLEDAVTLQTVVVQIPTGLG---SNHIKQALVSKLQ

XP_038890552.1 transcription factor MYC3-like [Benincasa hispida]3.6e-2154.7Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSN
        +S  DKA +LS A+SYINELQ +I E+ES   +  G E  EE  +S     +V+E++VK +G DQAVIRV++KN+S+A A+LM ALRDL LKV H +MSN
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHHGNMSN

Query:  LEDAVTLQTVVVQIPTG
        L+D +TLQ +VV+IP+G
Subjt:  LEDAVTLQTVVVQIPTG

TrEMBL top hitse value%identityAlignment
A0A0A0LKN8 BHLH domain-containing protein5.5e-2049.3Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELES-------EHPRDAGEETSEETEASSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKV
        +S  DKA +LS AVSYINEL+ +I E+ES       E      E   EE  +S     R +E++VK +G D+AVIRVES+NLS+A A+LM ALRDL LKV
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELES-------EHPRDAGEETSEETEASSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKV

Query:  HHGNMSNLEDAVTLQTVVVQIPTGLG---SNHIKQALVSKLQ
         HG+M NL+D +TLQ +VV++P+G G      IK+AL++ L+
Subjt:  HHGNMSNLEDAVTLQTVVVQIPTGLG---SNHIKQALVSKLQ

A0A1S3B4K7 transcription factor MYC3-like3.3e-2050.71Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELES----EHPRDAGEETSEETEASS-GGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHH
        +S  DKA +LS AVSYINEL+ +I E+ES    +  ++  +E   E EASS     R +E++VK +G D+AVIRVES+NLS+A A+LM ALRDLGLKV H
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELES----EHPRDAGEETSEETEASS-GGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHH

Query:  GNMSNLEDAVTLQTVVVQIPTGLG---SNHIKQALVSKLQ
        G+M N +D +TLQ +VV++P+G G      IK+AL++ L+
Subjt:  GNMSNLEDAVTLQTVVVQIPTGLG---SNHIKQALVSKLQ

A0A2N9EQ73 BHLH domain-containing protein4.0e-1845.03Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETE------------------ASSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARL
        +S  DKA +LS AVSYINEL+T+++ELES+  RD+ +   E T+                   +S G G V+EVEVK +G D A+IRV+S+N+++  ARL
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETE------------------ASSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARL

Query:  MGALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSN-HIKQALVSKLQ
        MGALRDL  +VHH +MS + D + LQ VVV++P GL +   +K AL+ +L+
Subjt:  MGALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSN-HIKQALVSKLQ

A0A513X4W6 Transcription factor MYC3-like isoform X16.8e-1845.07Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGG-------EGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKV
        +S  DKA +L+ AVSYI +L+ ++EELE+E  R   E   E+   S G        E   +EVEVK LG D A+IRV S+NL+H  ARLM ALRDL L V
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGG-------EGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKV

Query:  HHGNMSNLEDAVTLQTVVVQIPTG-LGSNHIKQALVSKLQPS
        HH  +S  ++ + +Q VVV++P   LG ++++ AL+ +LQ S
Subjt:  HHGNMSNLEDAVTLQTVVVQIPTG-LGSNHIKQALVSKLQPS

A0A5A7V6X0 Transcription factor MYC3-like3.3e-2050.71Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELES----EHPRDAGEETSEETEASS-GGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHH
        +S  DKA +LS AVSYINEL+ +I E+ES    +  ++  +E   E EASS     R +E++VK +G D+AVIRVES+NLS+A A+LM ALRDLGLKV H
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELES----EHPRDAGEETSEETEASS-GGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLMGALRDLGLKVHH

Query:  GNMSNLEDAVTLQTVVVQIPTGLG---SNHIKQALVSKLQ
        G+M N +D +TLQ +VV++P+G G      IK+AL++ L+
Subjt:  GNMSNLEDAVTLQTVVVQIPTGLG---SNHIKQALVSKLQ

SwissProt top hitse value%identityAlignment
A0A060KY90 Transcription factor MYC12.1e-0832.43Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRI-------EELESEHPRDAGEETSEETEASSGG-----EGRVV--EVEVKALGEDQAVIRVESKNLSHAGARLMGAL
        +S  DKA +L  A++YINEL++++       EEL S+      E T++ +   S       + ++V  +++VK +G D A+IR++    +H  ARLM AL
Subjt:  LSSTDKADVLSGAVSYINELQTRI-------EELESEHPRDAGEETSEETEASSGG-----EGRVV--EVEVKALGEDQAVIRVESKNLSHAGARLMGAL

Query:  RDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKLQPS
        +DL L VHH ++S + D +  Q  V           ++ AL SK+  S
Subjt:  RDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKLQPS

A0A3Q7HRZ6 Transcription factor MYC21.5e-0932.43Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESEHP------RDAGEET---------SEETEASSGGEGRVVEV--EVKALGEDQAVIRVESKNLSHAGARLM
        +S  DKA +L  A+SYINEL+++++  ES+         D  +E+         +++ + SS   G++V+V  +VK +G D A+IR++    +H  ARLM
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESEHP------RDAGEET---------SEETEASSGGEGRVVEV--EVKALGEDQAVIRVESKNLSHAGARLM

Query:  GALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKL
         AL +L L VHH ++S + D +  Q  V           ++ AL SK+
Subjt:  GALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKL

O23090 Transcription factor bHLH145.4e-1236.91Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESEHPR------DAGEETSEETEASS-----------GGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLM
        +S  DKA +LS AVSYI  L+++I++LE+E  +      D  + +S  T  SS              G  +EV+VK +GE +A+IRV+++N++H  + LM
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESEHPR------DAGEETSEETEASS-----------GGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLM

Query:  GALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGS-NHIKQALVSKL
         AL ++  +V H N S L   V +Q VVV +P GL S + ++  LV  L
Subjt:  GALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGS-NHIKQALVSKL

Q9FIP9 Transcription factor MYC31.6e-0829.53Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESE----------------HPRDAGEETSEETEASSGGEGRVVEVE--VKALGEDQAVIRVESKNLSHAGARL
        +S  DKA +L  A+SYINEL++++++ ES+                + +  G    E   ++       +E+E  VK +G D  +IRV+     H GAR 
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESE----------------HPRDAGEETSEETEASSGGEGRVVEVE--VKALGEDQAVIRVESKNLSHAGARL

Query:  MGALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKL
        M AL++L L+V+H ++S + D +  Q  V         + +K AL++K+
Subjt:  MGALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKL

Q9LUK7 Transcription factor bHLH285.5e-0932.64Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGGEGRV-------------VEVEVKALGEDQAVIRVESKNLSHAGARLMGALR
        +S  DK  +L  AV YINEL+++ E +E E  + A E    E +  +G    +             +++EVK +  D A++RVES+   H GARLM AL 
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGGEGRV-------------VEVEVKALGEDQAVIRVESKNLSHAGARLMGALR

Query:  DLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKL
        DL L+V+H ++S + D +  Q  V           ++  L+SK+
Subjt:  DLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKL

Arabidopsis top hitse value%identityAlignment
AT1G32640.1 Basic helix-loop-helix (bHLH) DNA-binding family protein2.7e-1134.25Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGE------ETSEETEASSGGEGRV---------VEVEVKALGEDQAVIRVESKNLSHAGARLMGA
        +S  DKA +L  A++YINEL++++ + ESE  +   +      E +    ++SGG+            +E+EVK +G D A+IRVES   +H  ARLM A
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGE------ETSEETEASSGGEGRV---------VEVEVKALGEDQAVIRVESKNLSHAGARLMGA

Query:  LRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKL
        L DL L+V+H +MS + D +  Q  V           ++ +L+SK+
Subjt:  LRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKL

AT4G00870.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein3.8e-1336.91Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESEHPR------DAGEETSEETEASS-----------GGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLM
        +S  DKA +LS AVSYI  L+++I++LE+E  +      D  + +S  T  SS              G  +EV+VK +GE +A+IRV+++N++H  + LM
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESEHPR------DAGEETSEETEASS-----------GGEGRVVEVEVKALGEDQAVIRVESKNLSHAGARLM

Query:  GALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGS-NHIKQALVSKL
         AL ++  +V H N S L   V +Q VVV +P GL S + ++  LV  L
Subjt:  GALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGS-NHIKQALVSKL

AT4G17880.1 Basic helix-loop-helix (bHLH) DNA-binding family protein2.6e-0930.87Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESEHP----------RDAGE-ETSEETEASSGGEGRV---VEVEVKALGEDQAVIRVESKNLSHAGARLMGAL
        +S  DKA +L  A+SYI+EL++++++ ES+            ++AG  ++S +       E  V   +EV+VK +G D A+IR++    +H GA+ M AL
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESEHP----------RDAGE-ETSEETEASSGGEGRV---VEVEVKALGEDQAVIRVESKNLSHAGARLMGAL

Query:  RDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKLQPSP
        ++L L+V+H ++S + D +  Q  V         + +K AL  K+   P
Subjt:  RDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKLQPSP

AT5G46760.1 Basic helix-loop-helix (bHLH) DNA-binding family protein1.1e-0929.53Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESE----------------HPRDAGEETSEETEASSGGEGRVVEVE--VKALGEDQAVIRVESKNLSHAGARL
        +S  DKA +L  A+SYINEL++++++ ES+                + +  G    E   ++       +E+E  VK +G D  +IRV+     H GAR 
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESE----------------HPRDAGEETSEETEASSGGEGRVVEVE--VKALGEDQAVIRVESKNLSHAGARL

Query:  MGALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKL
        M AL++L L+V+H ++S + D +  Q  V         + +K AL++K+
Subjt:  MGALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKL

AT5G46830.1 NACL-inducible gene 13.9e-1032.64Show/hide
Query:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGGEGRV-------------VEVEVKALGEDQAVIRVESKNLSHAGARLMGALR
        +S  DK  +L  AV YINEL+++ E +E E  + A E    E +  +G    +             +++EVK +  D A++RVES+   H GARLM AL 
Subjt:  LSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGGEGRV-------------VEVEVKALGEDQAVIRVESKNLSHAGARLMGALR

Query:  DLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKL
        DL L+V+H ++S + D +  Q  V           ++  L+SK+
Subjt:  DLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCTCGCAGCGGCGCCACCGCCTCTGAAATCCCAATTCCAGCTAAACCCATGACCTACAGATGCTCTGTCTGCAACAAGATACTTTCATCAACGGACAAAGCCGA
CGTGCTGTCCGGTGCAGTCTCGTACATCAACGAGCTGCAGACGAGGATCGAGGAGTTGGAATCTGAGCACCCGAGAGACGCGGGCGAGGAGACTTCGGAGGAAACGGAAG
CAAGCTCTGGAGGGGAAGGGAGGGTGGTGGAGGTTGAAGTGAAGGCACTTGGAGAGGATCAGGCTGTGATAAGAGTTGAGAGTAAGAATTTGAGCCATGCTGGGGCCAGG
CTGATGGGTGCGCTTAGAGATCTGGGCTTGAAGGTTCACCATGGAAACATGTCCAATTTGGAAGATGCAGTAACATTGCAAACTGTGGTGGTTCAAATTCCAACAGGACT
TGGATCCAATCATATCAAACAAGCACTTGTTAGTAAGTTGCAGCCTAGTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCTCGCAGCGGCGCCACCGCCTCTGAAATCCCAATTCCAGCTAAACCCATGACCTACAGATGCTCTGTCTGCAACAAGATACTTTCATCAACGGACAAAGCCGA
CGTGCTGTCCGGTGCAGTCTCGTACATCAACGAGCTGCAGACGAGGATCGAGGAGTTGGAATCTGAGCACCCGAGAGACGCGGGCGAGGAGACTTCGGAGGAAACGGAAG
CAAGCTCTGGAGGGGAAGGGAGGGTGGTGGAGGTTGAAGTGAAGGCACTTGGAGAGGATCAGGCTGTGATAAGAGTTGAGAGTAAGAATTTGAGCCATGCTGGGGCCAGG
CTGATGGGTGCGCTTAGAGATCTGGGCTTGAAGGTTCACCATGGAAACATGTCCAATTTGGAAGATGCAGTAACATTGCAAACTGTGGTGGTTCAAATTCCAACAGGACT
TGGATCCAATCATATCAAACAAGCACTTGTTAGTAAGTTGCAGCCTAGTCCATGA
Protein sequenceShow/hide protein sequence
MVARSGATASEIPIPAKPMTYRCSVCNKILSSTDKADVLSGAVSYINELQTRIEELESEHPRDAGEETSEETEASSGGEGRVVEVEVKALGEDQAVIRVESKNLSHAGAR
LMGALRDLGLKVHHGNMSNLEDAVTLQTVVVQIPTGLGSNHIKQALVSKLQPSP