; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004959 (gene) of Chayote v1 genome

Gene IDSed0004959
OrganismSechium edule (Chayote v1)
Descriptionbinding partner of ACD11 1-like
Genome locationLG06:40249512..40252470
RNA-Seq ExpressionSed0004959
SyntenySed0004959
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034360 - Vip1-like, RNA recognition motif, plant
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574098.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]3.4e-11389.75Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS
        MNPGGYTVEVTGLSPKATEKD+LDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETACLLSGATIVDQ VCITRWGHFDEE+DFWSR S YHEED +
Subjt:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS

Query:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG
          SAQ SQFVS   TAV+MAQ+VVKTMLAMGYVLGKDT TKAKA DESHQVSA AAAKVAD+SNRIGLTDMIGAGYEA KTMDEKYHVLQTTKSAISATG
Subjt:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH
        RTAAAAADTVV+SSYFS+GALFMSDALNRAAK AADLGSRGL+H
Subjt:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH

KAG7013155.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-11390.16Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS
        MNPGGYTVEVTGLSPKATEKD+LDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETACLLSGATIVDQ VCITRWGHFDEE+DFWSR S YHEED +
Subjt:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS

Query:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG
          SAQ SQFVS   TAV+MAQ+VVKTMLAMGYVLGKDT TKAKA DESHQVSA AAAKVAD+SNRIGLTDMIGAGYEA KTMDEKYHVLQTTKSAISATG
Subjt:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH
        RTAAAAADTVV+SSYFS+GALFMSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH

XP_022945905.1 binding partner of ACD11 1-like [Cucurbita moschata]1.2e-11390.16Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS
        MNPGGYTVEVTGLSPKATEKD+LDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETACLLSGATIVDQ VCITRWGHFDEE+DFWSR S YHEED +
Subjt:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS

Query:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG
          SAQ SQFVS   TAV+MAQ+VVKTMLAMGYVLGKDT TKAKA DESHQVSA AAAKVAD+SNRIGLTDMIGAGYEA KTMDEKYHVLQTTKSAISATG
Subjt:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH
        RTAAAAADTVV+SSYFS+GALFMSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH

XP_022968306.1 binding partner of ACD11 1-like isoform X1 [Cucurbita maxima]2.6e-11389.75Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS
        MNPGGYTVEVTGLSPKATEKD+LDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETACLLSGATIVDQ VCITRWGHFDEE+DFWSR S YHEED +
Subjt:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS

Query:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG
         ASAQ SQF S   TAV+MAQ+VVKTMLAMGYVLGKDT TKAKA DESHQVSA AAAKVAD+SNRIGLTDMIGAGYEA KTMDEKYHVLQTTKSAISATG
Subjt:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH
        RTAAAAADTVV+SSYFS+GALF+SDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH

XP_023541311.1 binding partner of ACD11 1-like isoform X1 [Cucurbita pepo subsp. pepo]4.5e-11390.16Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS
        MNPGGYTVEVTGLSPKATEKD+LDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETACLLSGATIVDQ VCITRWGHFDEE+DFWSR S  HEED +
Subjt:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS

Query:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG
         ASAQ SQFVS   TAV+MAQ+VVKTMLAMGYVLGKDT TKAKA DESHQVSA AAAKVAD+SNRIGLTDMIGAGYEA KTMDEKYHVLQTTKSAISATG
Subjt:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH
        RTAAAAADTVV+SSYFS+GALFMSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH

TrEMBL top hitse value%identityAlignment
A0A0A0KSM6 RRM domain-containing protein6.5e-11087.7Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS
        MNPGGYTVEVTGLSP ATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGA IVDQ VCITRWGHFD+E+ FWSR   + EEDS+
Subjt:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS

Query:  SASAQGSQFVST---AVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG
         ASAQ SQF+S+   AVTMAQEVVKTMLAMGYVLGKDTLTKAKA DESHQVSA AAAKVAD+S+RIGLTDM+GAGYEAVK++DEKYHVL+TTKSAISATG
Subjt:  SASAQGSQFVST---AVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH
        RTAAAAADTVV+SSYFS+GALFMSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH

A0A1S3BET5 binding partner of ACD11 14.2e-10986.89Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS
        MNPGGYTVEVTGLSP ATEKDVLDFFAFSGAIELVEIVRSG+DACTAYVTFKDAYSQETACLLSGA IVDQ VCITRWGHFD+E+ FWSR   + EEDS+
Subjt:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS

Query:  SASAQGSQFVST---AVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG
        SASAQ SQF+S+   AVTMAQEVVKTMLAMGYVLGKDT TKAKA DESHQVSA AAAKVAD+S+RIGLTDM+GAG+EAVK++DEKYHVL+TTKSAISATG
Subjt:  SASAQGSQFVST---AVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH
        RTAAAAADTVV+SSYFS+GALFMSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH

A0A5D3CVI0 Binding partner of ACD11 14.2e-10986.89Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS
        MNPGGYTVEVTGLSP ATEKDVLDFFAFSGAIELVEIVRSG+DACTAYVTFKDAYSQETACLLSGA IVDQ VCITRWGHFD+E+ FWSR   + EEDS+
Subjt:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS

Query:  SASAQGSQFVST---AVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG
        SASAQ SQF+S+   AVTMAQEVVKTMLAMGYVLGKDT TKAKA DESHQVSA AAAKVAD+S+RIGLTDM+GAG+EAVK++DEKYHVL+TTKSAISATG
Subjt:  SASAQGSQFVST---AVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH
        RTAAAAADTVV+SSYFS+GALFMSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH

A0A6J1G2B1 binding partner of ACD11 1-like5.7e-11490.16Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS
        MNPGGYTVEVTGLSPKATEKD+LDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETACLLSGATIVDQ VCITRWGHFDEE+DFWSR S YHEED +
Subjt:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS

Query:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG
          SAQ SQFVS   TAV+MAQ+VVKTMLAMGYVLGKDT TKAKA DESHQVSA AAAKVAD+SNRIGLTDMIGAGYEA KTMDEKYHVLQTTKSAISATG
Subjt:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH
        RTAAAAADTVV+SSYFS+GALFMSDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH

A0A6J1HUH9 binding partner of ACD11 1-like isoform X11.3e-11389.75Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS
        MNPGGYTVEVTGLSPKATEKD+LDFFAFSGAIELVEIVRSGEDACTAYV+FKDAYSQETACLLSGATIVDQ VCITRWGHFDEE+DFWSR S YHEED +
Subjt:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS

Query:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG
         ASAQ SQF S   TAV+MAQ+VVKTMLAMGYVLGKDT TKAKA DESHQVSA AAAKVAD+SNRIGLTDMIGAGYEA KTMDEKYHVLQTTKSAISATG
Subjt:  SASAQGSQFVS---TAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH
        RTAAAAADTVV+SSYFS+GALF+SDALNRAAK AADLGSRGLEH
Subjt:  RTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLEH

SwissProt top hitse value%identityAlignment
P87216 Protein vip14.5e-0725.23Show/hide
Query:  VEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSSSAS----
        V VT +SP+ TEK + DFF+F G +  +   +SGE   TA + F+   + +TA LL  A +    + IT                    ED  +AS    
Subjt:  VEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSSSAS----

Query:  --AQGSQFVSTAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATGRTAA
          A G Q           ++  +L+ GY L   TL K+  LD+S+ VS+                 ++ +    V++++E+YHV +      +    +  
Subjt:  --AQGSQFVSTAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATGRTAA

Query:  AAADTVVKSSYFSK
            + + S+YF K
Subjt:  AAADTVVKSSYFSK

Q9LFD5 Binding partner of ACD11 17.6e-3138.24Show/hide
Query:  TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSSSASAQG
        +V+V  LS  ATE D+ +FF+FSG +E ++I +S E   +AYVTFK+    ETA LLSGA+I DQ V I       E    +S  ++ H E  SS +   
Subjt:  TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSSSASAQG

Query:  SQFVSTAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAG----YEAVKTMDEKYHVLQTTKSAISATGRTAAA
             + V  A++VV +MLA G++LGKD + KAKA DE H  ++ A A VA +  +IGL+  + AG     E +K +D+ + V + TKS  +A  +T ++
Subjt:  SQFVSTAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAG----YEAVKTMDEKYHVLQTTKSAISATGRTAAA

Query:  AADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLE
        A   V+K+ Y   G  + + A NR A+ A ++G +  E
Subjt:  AADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLE

Arabidopsis top hitse value%identityAlignment
AT1G14340.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-7564.41Show/hide
Query:  GYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSS-SYHEEDSSSAS
        GY VEVTGLSP  T  D++DFF+FSG I+ ++IVRSGE ACTAYV FKD+YSQETA LL+GATI+DQ VCITRWG   EE+DFW+ +S  + +E  S   
Subjt:  GYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSS-SYHEEDSSSAS

Query:  AQGSQF-VSTAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATGRTAAA
        AQ S+F    AVT AQEVVK MLA G+VLGKD L+KAKA DESH VSA A A+V+ +  RIGLTD I  G EAV+  D++YHV  T KSA+ ATGRTAAA
Subjt:  AQGSQF-VSTAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATGRTAAA

Query:  AADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRG
        AA +VV SSYFS GAL++S AL RAAK A+DLG+RG
Subjt:  AADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRG

AT3G01210.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.7e-5250Show/hide
Query:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS
        M P GY  +VT LSP+ATEKDV  FF+  G +ELVEI     DA TAYVTF+DAY+ + A LLSGATIVDQ V I+ +G +  E      ++   EED S
Subjt:  MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSS

Query:  SASAQGSQFVST---AVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAI----
            +   F S+   A+T+AQ+VV+TMLA GYVL KD + KAKALDES + S++ A K+A++S+ +GLT  I +  E V++ DEKYH    TKSA+    
Subjt:  SASAQGSQFVST---AVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAI----

Query:  -------SATGRTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRG
               + TG+ AAAAA +VV S YF+ GAL+ SDAL RAAK AA +G  G
Subjt:  -------SATGRTAAAAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRG

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-3639.33Show/hide
Query:  TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRS-SSYHEEDSSSASAQ
        TV+V+ +S  AT++D+ +FF+FSG I  +E     E    AYVTFKD    ETA LLSGATIVD  V ++       +Y     + +S   +DS+ +   
Subjt:  TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRS-SSYHEEDSSSASAQ

Query:  GSQFVSTAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGY----EAVKTMDEKYHVLQTTKSAISATGRTAA
        G     + +  A++VV +MLA G++LGKD + KAK++DE HQ+++ A+AKVA    +IG TD I  G     E V+ +D+KY V + TKSAI+A  +T +
Subjt:  GSQFVSTAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGY----EAVKTMDEKYHVLQTTKSAISATGRTAA

Query:  AAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLE
         A   ++K+ Y   GA +++ A N+ AK A ++G +  E
Subjt:  AAADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLE

AT5G16840.2 binding partner of acd11 18.3e-3338.24Show/hide
Query:  TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSSSASAQG
        +V+V  LS  ATE D+ +FF+FSG +E ++I  S E   +AYVTFK+    ETA LLSGA+I DQ V I       E    +S  ++ H E  SS +   
Subjt:  TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSSSASAQG

Query:  SQFVSTAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAG----YEAVKTMDEKYHVLQTTKSAISATGRTAAA
             + V  A++VV +MLA G++LGKD + KAKA DE H  ++ A A VA +  +IGL+  + AG     E +K +D+ + V + TKS  +A  +T ++
Subjt:  SQFVSTAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAG----YEAVKTMDEKYHVLQTTKSAISATGRTAAA

Query:  AADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLE
        A   V+K+ Y   G  + + A NR A+ A ++G +  E
Subjt:  AADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-3638.66Show/hide
Query:  TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSSSASAQG
        TV+V+ +S +ATE+D+ +FF+FSG I  +E     + +  AYVTFKD    ETA LL+G+TIVD  V +T    +    D  +   S  E + SS+  + 
Subjt:  TVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSSSASAQG

Query:  SQFVSTAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAG----YEAVKTMDEKYHVLQTTKSAISATGRTAAA
           V      A++VV  M++ G+VLGKD + KAK+LDE HQ+++ A+A+V     RIG T+ I  G     E VK +D+K+ V + TKSAI+A  +T + 
Subjt:  SQFVSTAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAG----YEAVKTMDEKYHVLQTTKSAISATGRTAAA

Query:  AADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLE
        A   ++K+ Y   GA +++ A NR +K A ++G +  E
Subjt:  AADTVVKSSYFSKGALFMSDALNRAAKFAADLGSRGLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCCGGTGGCTACACGGTTGAAGTGACGGGCTTGTCTCCCAAAGCAACGGAGAAGGATGTCCTCGATTTCTTCGCTTTCTCCGGCGCAATCGAGCTCGTTGAGAT
TGTGAGATCTGGTGAAGATGCCTGCACTGCCTATGTGACGTTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTGCTGAGTGGGGCGACAATTGTTGACCAACCCGTGT
GCATAACACGGTGGGGACATTTTGATGAAGAATATGATTTTTGGAGTAGGTCTTCCAGTTACCATGAAGAAGACAGCTCTTCTGCTTCGGCTCAAGGAAGTCAGTTTGTT
TCCACTGCAGTGACCATGGCCCAGGAAGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGCAAAGATACATTGACCAAAGCCAAAGCCTTAGATGAATCTCACCA
GGTCTCAGCAATGGCAGCAGCTAAGGTAGCTGATATGAGTAATAGAATTGGCCTTACCGACATGATCGGTGCGGGTTATGAAGCGGTTAAAACCATGGATGAGAAGTACC
ACGTATTGCAGACAACGAAATCAGCCATATCAGCCACTGGAAGAACGGCTGCTGCTGCTGCCGATACCGTAGTCAAGAGTAGCTACTTCTCCAAAGGAGCTCTTTTCATG
TCTGATGCACTGAATCGGGCAGCCAAATTTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACATTAA
mRNA sequenceShow/hide mRNA sequence
TAGCTTTCATCAGAAGCTTTCTCGAACTTATTCTTTTTTACAGAGATTTCATTTTCTGAAAGAGTCAATTCGTTCATCTTCATCTGCAAGTTCTTCACATTTCAACGAAC
GAAGAGTCGAATCAATTTGCCGTTGCAGCGAAGCCATGAATCCCGGTGGCTACACGGTTGAAGTGACGGGCTTGTCTCCCAAAGCAACGGAGAAGGATGTCCTCGATTTC
TTCGCTTTCTCCGGCGCAATCGAGCTCGTTGAGATTGTGAGATCTGGTGAAGATGCCTGCACTGCCTATGTGACGTTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTT
GCTGAGTGGGGCGACAATTGTTGACCAACCCGTGTGCATAACACGGTGGGGACATTTTGATGAAGAATATGATTTTTGGAGTAGGTCTTCCAGTTACCATGAAGAAGACA
GCTCTTCTGCTTCGGCTCAAGGAAGTCAGTTTGTTTCCACTGCAGTGACCATGGCCCAGGAAGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGCAAAGATACA
TTGACCAAAGCCAAAGCCTTAGATGAATCTCACCAGGTCTCAGCAATGGCAGCAGCTAAGGTAGCTGATATGAGTAATAGAATTGGCCTTACCGACATGATCGGTGCGGG
TTATGAAGCGGTTAAAACCATGGATGAGAAGTACCACGTATTGCAGACAACGAAATCAGCCATATCAGCCACTGGAAGAACGGCTGCTGCTGCTGCCGATACCGTAGTCA
AGAGTAGCTACTTCTCCAAAGGAGCTCTTTTCATGTCTGATGCACTGAATCGGGCAGCCAAATTTGCAGCTGACTTGGGTAGTCGTGGTCTTGAACATTAAGACATTAGA
TAGTCCTGCTCATTCAATGTAAATACAAACTGTAGAATTTGTAAAAGTTAATACTGATATTTTATCAGAGTGTAAACTTGTATGCATAAATTTTACATTTCATAGAGTTT
AATCTCACTAATCATTTAAATTCCACAAATATTCGGTAAAATATAT
Protein sequenceShow/hide protein sequence
MNPGGYTVEVTGLSPKATEKDVLDFFAFSGAIELVEIVRSGEDACTAYVTFKDAYSQETACLLSGATIVDQPVCITRWGHFDEEYDFWSRSSSYHEEDSSSASAQGSQFV
STAVTMAQEVVKTMLAMGYVLGKDTLTKAKALDESHQVSAMAAAKVADMSNRIGLTDMIGAGYEAVKTMDEKYHVLQTTKSAISATGRTAAAAADTVVKSSYFSKGALFM
SDALNRAAKFAADLGSRGLEH