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Sed0004965 (gene) of Chayote v1 genome

Gene IDSed0004965
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:5110722..5114792
RNA-Seq ExpressionSed0004965
SyntenySed0004965
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008437426.1 PREDICTED: uncharacterized protein LOC103482844 [Cucumis melo]1.1e-2577.22Show/hide
Query:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
        MGGAQA+KRIPRIKFP R+P+ SGSTS+TPS NG DD IF +SL  +A KT+GGKASLQPKR P+SNEEIEAILLGGCI
Subjt:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
XP_022156457.1 uncharacterized protein LOC111023342 [Momordica charantia]5.2e-2678.48Show/hide
Query:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
        MGGAQA+KRIPRIKFP R+PNPSGSTSQTPS  GVDDQ+  ++  GN  KT+GGKASLQPKRTP+SNEEIEA+LLGGCI
Subjt:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
XP_022958002.1 uncharacterized protein LOC111459363 [Cucurbita moschata]4.7e-2782.28Show/hide
Query:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
        MG AQALKRIPRIKFP R+PNPSGSTSQTP+  GVDDQ+   SLN  A KTIGGKASLQPKRTP+SNEEIEAILLGGCI
Subjt:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
XP_023534508.1 uncharacterized protein LOC111796047 [Cucurbita pepo subsp. pepo]4.2e-2883.54Show/hide
Query:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
        MGGAQALKRIPRIKFP R+PNPSGSTSQTP+  GVDDQ+   SLN  A KTIGGKASLQPKRTP+SNEEIEAILLGGCI
Subjt:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
XP_038875405.1 uncharacterized protein LOC120067868 [Benincasa hispida]1.4e-2882.28Show/hide
Query:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
        MGGAQA+KRIPRIKFP R+PNPSGSTS+TPS +GVDDQIF +SL   A KT+GGKASLQPKRTP+SNEEIEAILLGGCI
Subjt:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
TrEMBL top hitse value%identityAlignment
A0A0A0KMD8 Uncharacterized protein8.0e-2574.68Show/hide
Query:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
        MGGAQA+KRIPRIKFP R+ + SGSTS+TPS +G DD +F +SL  +A KT+GGKASLQPKRTP+SNEEIEAILLGGCI
Subjt:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
A0A1S3AUJ6 uncharacterized protein LOC1034828445.6e-2677.22Show/hide
Query:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
        MGGAQA+KRIPRIKFP R+P+ SGSTS+TPS NG DD IF +SL  +A KT+GGKASLQPKR P+SNEEIEAILLGGCI
Subjt:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
A0A6J1DS43 uncharacterized protein LOC1110233422.5e-2678.48Show/hide
Query:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
        MGGAQA+KRIPRIKFP R+PNPSGSTSQTPS  GVDDQ+  ++  GN  KT+GGKASLQPKRTP+SNEEIEA+LLGGCI
Subjt:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
A0A6J1H0Q6 uncharacterized protein LOC1114593632.3e-2782.28Show/hide
Query:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
        MG AQALKRIPRIKFP R+PNPSGSTSQTP+  GVDDQ+   SLN  A KTIGGKASLQPKRTP+SNEEIEAILLGGCI
Subjt:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
A0A6J1K8D8 uncharacterized protein LOC1114915852.3e-2782.28Show/hide
Query:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
        MG AQALKRIPRIKFP R+PNPSGSTSQTP+  GVDDQ+   SLN  A KTIGGKASLQPKRTP+SNEEIEAILLGGCI
Subjt:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G23885.1 unknown protein8.5e-1960.76Show/hide
Query:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
        M     LKRIPRIKFP R+ NPS S  ++   N   D +F ++LN N  KT GGKAS QPKRTP+SNEE+EAILLGGCI
Subjt:  MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI
AT5G24165.1 unknown protein5.7e-1554.67Show/hide
Query:  LKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTI--GGKASLQPKRTPISNEEIEAILLGGCI
        ++RIPRIKFP R+   SGS     S++GV   +  +S    APK    GGKASLQPKRTP+S++EIE+I+LGGCI
Subjt:  LKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTI--GGKASLQPKRTPISNEEIEAILLGGCI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGAGCCCAAGCCCTAAAGAGGATCCCTCGCATCAAGTTCCCCATTCGAAATCCCAACCCTTCTGGTTCTACGTCCCAGACCCCATCGATAAATGGGGTGGATGA
TCAAATTTTCTTAGCATCTTTAAATGGAAATGCCCCCAAAACTATTGGAGGAAAAGCTTCCCTTCAGCCTAAAAGGACTCCAATTTCCAATGAGGAGATTGAGGCTATAT
TGCTGGGTGGCTGCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATTTTGTAGAAATGGAAATTATTTTATTCCTAATACTTATTCTCATTTCCTTATTTTAGTACAAACCTCGCGTGTTGAAAACGCCTTTGTCCGTTTCCAAGTTCTCCACC
ACATTGCTTCAAATCGCCATCACTTTCACGAAGATCTTCCTCAAGTTTCTGCGCACCAAAACCCAAAATCGAGAAAGCTACAATGGGTGGAGCCCAAGCCCTAAAGAGGA
TCCCTCGCATCAAGTTCCCCATTCGAAATCCCAACCCTTCTGGTTCTACGTCCCAGACCCCATCGATAAATGGGGTGGATGATCAAATTTTCTTAGCATCTTTAAATGGA
AATGCCCCCAAAACTATTGGAGGAAAAGCTTCCCTTCAGCCTAAAAGGACTCCAATTTCCAATGAGGAGATTGAGGCTATATTGCTGGGTGGCTGCATCTGATGAGCTTT
GAGAGTGAAATAGACTATGGTTGCTGTGGACAGTCTTTTCTTCTATTTTAAGTTTTAGTTTCTATTGATCCTATCATATCCTATCATATCCTATCATATCATAACATTGT
GAAATTTCTTTATGTGAAAGAAATCTTGATTTAAATCCTTTTTAATAAGAGGAAACTTTATACTTCATATTCAAATGAAATGCAGCTTTGAAGACCCAGTTTTACTTTAT
TCTTGTGGTGTTGACCAAAACAGGGGCTGTGATGTTGCAAGTAGAAGGAAGGGATTTGTCAAAGATAATATAAATTTAGTATTCTAACTCAATTGCTTTGTTGGTAAGGA
TAATATTAAGCATAGATTCAAAAAGAAAGGATAATATCAAGTATGCTGGGTTTTCTTTTTTAATAATGTGG
Protein sequenceShow/hide protein sequence
MGGAQALKRIPRIKFPIRNPNPSGSTSQTPSINGVDDQIFLASLNGNAPKTIGGKASLQPKRTPISNEEIEAILLGGCI