; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004968 (gene) of Chayote v1 genome

Gene IDSed0004968
OrganismSechium edule (Chayote v1)
Descriptionglycine-rich cell wall structural protein 1.8-like isoform X3
Genome locationLG04:38506277..38507062
RNA-Seq ExpressionSed0004968
SyntenySed0004968
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601160.1 hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sororia]4.3e-2966.89Show/hide
Query:  MPAFCPPLSPFEPPPPFSFNDRFVGGGGVGGDDKPASGGGAGGEM--STMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFDGGGGGGVSVAFEGGGGG
        MPAFCPPLSPFE  PPFSFN  FV   G GG D+  SG GAGGEM  S  GGGL VV DGGGGG LPVV DGGGGGGL V  DG GGGG+ V  +G GGG
Subjt:  MPAFCPPLSPFEPPPPFSFNDRFVGGGGVGGDDKPASGGGAGGEM--STMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFDGGGGGGVSVAFEGGGGG

Query:  GVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDGGGGG
        G+ V  DG GGGG+ V  DG GGGG+ V  DGGGGG  SV F+GGGGG
Subjt:  GVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDGGGGG

XP_016900208.1 PREDICTED: loricrin-like [Cucumis melo]5.6e-3774.38Show/hide
Query:  GGGGVGGDDKPASGGGAGGEMSTMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGV
        GGGG GGD+     G         GGG+ VVLDGGGGG + VVFDGGGGGG+SV FDGGGGGGVSV F+GGGGGGVSV FDGGGGGGVLV  DGGGGGGV
Subjt:  GGGGVGGDDKPASGGGAGGEMSTMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGV

Query:  SVAFDGGGGGGVSVAFDGGGGGLSVAFDGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVS
        SV FD GGGGGVSV FDGGGGG+SV  DGGGGGGVSV  DGGGGGGV V  DGGGGG  S
Subjt:  SVAFDGGGGGGVSVAFDGGGGGLSVAFDGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVS

XP_022957272.1 loricrin-like [Cucurbita moschata]4.6e-3165.38Show/hide
Query:  MQINDRNPNKPVPTITPKAMPAFCPPLSPFEPPPPFSFNDRFVGGGGVGGDDKPASGGGAGGEM--STMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVA
        MQ+N +NPNKP P ITP AMPAFCPPLSPFE  PPFSFN  FV   G GG D+  SG GAGGEM  S  GGGL VV DGGGGG LPVV DGGGGGGL V 
Subjt:  MQINDRNPNKPVPTITPKAMPAFCPPLSPFEPPPPFSFNDRFVGGGGVGGDDKPASGGGAGGEM--STMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVA

Query:  FDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGG
         DG GGGG+ V  +G GGGG+ V  DGGG         GGGGG  SV F+GGGGGG
Subjt:  FDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGG

XP_023549817.1 glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo]1.3e-2863.23Show/hide
Query:  MQINDRNPNKPVPTITPKAMPAFCPPLSPFEPPPPFSFNDRFVGGGGVGGDDKPASGGGAGGEMSTMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFD
        MQ+N +NPNKP P ITP AMPAFCPPLSPFE  PPFSFN  FV G G G  D+  SG GAGGEM          L  GGGG L VVFDGGGGG  SV F+
Subjt:  MQINDRNPNKPVPTITPKAMPAFCPPLSPFEPPPPFSFNDRFVGGGGVGGDDKPASGGGAGGEMSTMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFD

Query:  GGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGV-SVAFDGGGGGG
        GGGGGG+ V  +  GGGG+ V  DG GGGG+ V  DGGGGGG  SV F+GGGGGG
Subjt:  GGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGV-SVAFDGGGGGG

XP_031741791.1 glycine-rich protein 23-like [Cucumis sativus]6.4e-6570.57Show/hide
Query:  MQINDRNPNKPVPTITPKAMPAFCPPLSPFEPPPPFSFNDRFVGGGGVGGDDKPASGGGAGGEMSTM---GGGLLVVLDGGGGGKLPVVFDGGGGGGLSV
        MQIN  NPNKP P ITP A+PAFCPPL+PFEPPPPFSFN     G G GG D+P  GGGAGG+++     GGG LVVLDGGGG  + V  DG GGGG SV
Subjt:  MQINDRNPNKPVPTITPKAMPAFCPPLSPFEPPPPFSFNDRFVGGGGVGGDDKPASGGGAGGEMSTM---GGGLLVVLDGGGGGKLPVVFDGGGGGGLSV

Query:  AFDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFD-GGGGGLSVAFDGGGGGGVSVAFDGGGGGGVLVAFDG
           GGGGGG SVA +GGGGGG SVA DGGGGGG  VA DGGGGGG SVA DGGGGGGVSVA D GGGGG SVA DGGGGGG SVA DGGGGGG  VA DG
Subjt:  AFDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFD-GGGGGLSVAFDGGGGGGVSVAFDGGGGGGVLVAFDG

Query:  GGGGGVSVAFDGGGGGGVSVAFDGGGGGLATFNGGGGGGVSVAFNGGGGGGLSVVFKGGGGGDAS
        GGGGG SVA DGGGGGG SVA D          GGGGGG SVA +GGGGGG SVV   GGGGDAS
Subjt:  GGGGGVSVAFDGGGGGGVSVAFDGGGGGLATFNGGGGGGVSVAFNGGGGGGLSVVFKGGGGGDAS

TrEMBL top hitse value%identityAlignment
A0A1S4DW63 loricrin-like2.7e-3774.38Show/hide
Query:  GGGGVGGDDKPASGGGAGGEMSTMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGV
        GGGG GGD+     G         GGG+ VVLDGGGGG + VVFDGGGGGG+SV FDGGGGGGVSV F+GGGGGGVSV FDGGGGGGVLV  DGGGGGGV
Subjt:  GGGGVGGDDKPASGGGAGGEMSTMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGV

Query:  SVAFDGGGGGGVSVAFDGGGGGLSVAFDGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVS
        SV FD GGGGGVSV FDGGGGG+SV  DGGGGGGVSV  DGGGGGGV V  DGGGGG  S
Subjt:  SVAFDGGGGGGVSVAFDGGGGGLSVAFDGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVS

A0A6I8T397 Cysteine-rich venom protein, putative9.1e-1758.72Show/hide
Query:  GGGGGGLSVAFDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDGGGGGLSVAFDGGGGGGVSVAFDGGGGG
        GGGGGG+ V   GGGGGGV     GGGGGGV V   GGGGGGV+V   GGGG        GGGGG V  +  GGGGG+ V   GGGGGGV V   GGGG 
Subjt:  GGGGGGLSVAFDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDGGGGGLSVAFDGGGGGGVSVAFDGGGGG

Query:  GVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDGGGGG--LATFNGGGGGGVSVAFNGGGGGGLSVVFKGGGGG
        GV++   GGGGGGV V   GGGGGGV V   GGGGG  ++  +GGGGGGV V  +GGGGGG+ V   GGGGG
Subjt:  GVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDGGGGG--LATFNGGGGGGVSVAFNGGGGGGLSVVFKGGGGG

A0A6I8U367 Uncharacterized protein2.7e-2155.2Show/hide
Query:  GGGVGGDDKPASGGGAGGEMSTM----GGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGG
        GGG G     + GGG GG +S      GGG++V   GGGGG + V   G GGGG+     GGGGGGV V  +GGGG GV V   GGGGGGV+    GGGG
Subjt:  GGGVGGDDKPASGGGAGGEMSTM----GGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGG

Query:  GGVSVAFDGGGGGG-VSVAFDGGGGGLSVAFDGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDGGGGG--LATFNGGGGGGVS
        GGV V   GGGGGG VS +  GGGGG+ V   GGGGGGV V   GGGGGGV+V   GGGGGGV V   GGGGG V     GGGGG  ++   GGGGGGV 
Subjt:  GGVSVAFDGGGGGG-VSVAFDGGGGGLSVAFDGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDGGGGG--LATFNGGGGGGVS

Query:  VAFNGGGGGGLSVVFKGGGGG
        +  +GGGGGG+ V    GGGG
Subjt:  VAFNGGGGGGLSVVFKGGGGG

A0A6J1GU15 glycine-rich cell wall structural protein 1.8-like isoform X34.0e-1249.07Show/hide
Query:  GGGGVGGDDKPASGGGAGGEM-STMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGG
        GGGG+GG     +GGGAGG      GGG      GG GG       GG GGG    F GG GGG    F GG GGG    F GG GGG    F GG GGG
Subjt:  GGGGVGGDDKPASGGGAGGEM-STMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFDGGGGGGVSVAFEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGG

Query:  VSVAFDGGGGGGVSVAFDGGGGGLSVAFDGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDGGGGGLATFNGGGGGGVSVAFNG
            F GG GGGV   F GG GG    F GG GGG    F GG GGG    F GG GGGV   F GG GGG      GG GG   F GG GGG    F G
Subjt:  VSVAFDGGGGGGVSVAFDGGGGGLSVAFDGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDGGGGGLATFNGGGGGGVSVAFNG

Query:  GGGGGLSVVFKGGGGG
        G GGG+   F GG GG
Subjt:  GGGGGLSVVFKGGGGG

A0A6J1JS83 glycine-rich cell wall structural protein 1.0-like1.8e-2865.49Show/hide
Query:  INDRNPNKPVPTITPKAMPAFCPPLSPFEPPPPFSFNDRFVGGGGVGGDDKPASGGGAGGEMSTMGGGLLVVLD-GGGGGKLPVVFDGGGGGGLSVAFDG
        +N +NPNKP P ITPK MPAFCPPLSPFE  PPFSFN  FV   G GG D+  SG GAGG     GGG+ VV D GGGGG LP V DGGGGGGL V  DG
Subjt:  INDRNPNKPVPTITPKAMPAFCPPLSPFEPPPPFSFNDRFVGGGGVGGDDKPASGGGAGGEMSTMGGGLLVVLD-GGGGGKLPVVFDGGGGGGLSVAFDG

Query:  GGGGGVSVAFEGGGGGGVSVAFDGGGGGGV-LVAFDGGGGGG
        GGGGG+ V  +G GGGG+ V  DGGGGGG   V F+GGGGGG
Subjt:  GGGGGVSVAFEGGGGGGVSVAFDGGGGGGV-LVAFDGGGGGG

SwissProt top hitse value%identityAlignment
P27483 Glycine-rich cell wall structural protein1.4e-0645.09Show/hide
Query:  GGGGVGGDDKPASGGGAGGEMSTMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFDGGGGGGVSVAFEGGGGGGVSVAFDGG-GGGGVLVAFDGGG---
        GGGG+GG     +GGGAGG    +GGG    L GG GG +     GG GGGL     GG GGG      GG GGG+     GG GGGG L    GGG   
Subjt:  GGGGVGGDDKPASGGGAGGEMSTMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFDGGGGGGVSVAFEGGGGGGVSVAFDGG-GGGGVLVAFDGGG---

Query:  --GGGVSVAFDGGGGGGVSVAFDGG-GGGLSVAFDGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDGGGGGLATFNGGGGGGV
          GGG      GG GGG+     GG GGGL     GG GGG       GGGGG+     GG GGG      GG GGG    F GG G      GG GGG 
Subjt:  --GGGVSVAFDGGGGGGVSVAFDGG-GGGLSVAFDGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDGGGGGLATFNGGGGGGV

Query:  SVAFNGGGGGGLSVVFKGGGGGDA
           F GG GGG    F GG GG A
Subjt:  SVAFNGGGGGGLSVVFKGGGGGDA

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATCAATGATAGGAATCCCAACAAACCTGTTCCTACAATCACTCCAAAGGCTATGCCGGCTTTTTGTCCACCACTCAGTCCTTTTGAGCCTCCTCCACCATTTTC
ATTTAATGATAGGTTTGTGGGCGGTGGTGGTGTTGGCGGTGACGATAAACCCGCATCAGGTGGTGGTGCGGGGGGTGAGATGTCAACGATGGGAGGTGGACTATTGGTTG
TGTTGGATGGCGGTGGTGGTGGCAAATTGCCAGTTGTATTCGATGGCGGTGGTGGTGGTGGACTATCAGTTGCATTTGATGGTGGTGGTGGTGGTGGAGTGTCAGTTGCA
TTTGAGGGGGGCGGCGGTGGAGGAGTGTCAGTTGCATTTGATGGTGGTGGCGGTGGTGGAGTGTTAGTTGCATTTGATGGTGGTGGCGGTGGTGGAGTGTCAGTTGCATT
TGATGGGGGCGGCGGTGGTGGAGTGTCAGTTGCATTTGATGGTGGCGGTGGTGGACTATCAGTTGCATTTGATGGTGGCGGCGGTGGTGGAGTGTCAGTTGCATTTGATG
GTGGTGGCGGTGGGGGAGTGTTAGTTGCATTTGATGGGGGCGGCGGTGGTGGAGTGTCAGTTGCATTTGATGGGGGCGGCGGTGGTGGAGTGTCAGTTGCATTTGATGGT
GGTGGTGGTGGACTGGCTACATTTAATGGCGGCGGCGGTGGTGGAGTGTCAGTTGCATTTAATGGTGGTGGCGGTGGTGGACTATCAGTTGTGTTCAAAGGTGGTGGAGG
AGGTGATGCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATCAATGATAGGAATCCCAACAAACCTGTTCCTACAATCACTCCAAAGGCTATGCCGGCTTTTTGTCCACCACTCAGTCCTTTTGAGCCTCCTCCACCATTTTC
ATTTAATGATAGGTTTGTGGGCGGTGGTGGTGTTGGCGGTGACGATAAACCCGCATCAGGTGGTGGTGCGGGGGGTGAGATGTCAACGATGGGAGGTGGACTATTGGTTG
TGTTGGATGGCGGTGGTGGTGGCAAATTGCCAGTTGTATTCGATGGCGGTGGTGGTGGTGGACTATCAGTTGCATTTGATGGTGGTGGTGGTGGTGGAGTGTCAGTTGCA
TTTGAGGGGGGCGGCGGTGGAGGAGTGTCAGTTGCATTTGATGGTGGTGGCGGTGGTGGAGTGTTAGTTGCATTTGATGGTGGTGGCGGTGGTGGAGTGTCAGTTGCATT
TGATGGGGGCGGCGGTGGTGGAGTGTCAGTTGCATTTGATGGTGGCGGTGGTGGACTATCAGTTGCATTTGATGGTGGCGGCGGTGGTGGAGTGTCAGTTGCATTTGATG
GTGGTGGCGGTGGGGGAGTGTTAGTTGCATTTGATGGGGGCGGCGGTGGTGGAGTGTCAGTTGCATTTGATGGGGGCGGCGGTGGTGGAGTGTCAGTTGCATTTGATGGT
GGTGGTGGTGGACTGGCTACATTTAATGGCGGCGGCGGTGGTGGAGTGTCAGTTGCATTTAATGGTGGTGGCGGTGGTGGACTATCAGTTGTGTTCAAAGGTGGTGGAGG
AGGTGATGCATCTTGA
Protein sequenceShow/hide protein sequence
MQINDRNPNKPVPTITPKAMPAFCPPLSPFEPPPPFSFNDRFVGGGGVGGDDKPASGGGAGGEMSTMGGGLLVVLDGGGGGKLPVVFDGGGGGGLSVAFDGGGGGGVSVA
FEGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDGGGGGLSVAFDGGGGGGVSVAFDGGGGGGVLVAFDGGGGGGVSVAFDGGGGGGVSVAFDG
GGGGLATFNGGGGGGVSVAFNGGGGGGLSVVFKGGGGGDAS