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Sed0004971 (gene) of Chayote v1 genome

Gene IDSed0004971
OrganismSechium edule (Chayote v1)
Descriptioncalmodulin-like
Genome locationLG02:3916268..3916792
RNA-Seq ExpressionSed0004971
SyntenySed0004971
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951134.1 uncharacterized protein LOC111454074 isoform X1 [Cucurbita moschata]1.1e-3149.7Show/hide
Query:  AQYEAIKLIRKNDRDKDGLYIPSS-QASVEFGKGEF---GKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLSREQMKEI
        A+ EA +L++K D + DG+      Q  +   +G       +   S+IPKA+N +  K  SN   K K Q++ K K SST+ +    S + LSREQMKEI
Subjt:  AQYEAIKLIRKNDRDKDGLYIPSS-QASVEFGKGEF---GKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLSREQMKEI

Query:  FKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK
        FK HDSN DGFL+I E+TKAF F GSI+PFNKAHY +A  D N DGLISE ELD+LIDY S  + KK
Subjt:  FKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK

XP_022951742.1 probable calcium-binding protein CML11 [Cucurbita moschata]6.2e-3248.85Show/hide
Query:  SHLQASFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLS
        S LQA +A+ +A +LI+K D++ DG+ +   +  V      G  +   +   S+IP+ N++   KL SNP T  K Q++ KA  SST+V+ E+ SN+PLS
Subjt:  SHLQASFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLS

Query:  REQMKEIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK
        REQ+K+IFK +DS+ DGFLNI E+TKAF F GSI PF KA Y +   DAN DGLISE EL++LIDY   ++KKK
Subjt:  REQMKEIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK

XP_022951799.1 probable calcium-binding protein CML11 [Cucurbita moschata]8.1e-3247.93Show/hide
Query:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLSREQMK
        ++A+ EA +L++K DR+ DG+ +   +  V      G  +   +   S+IPK N++   +L SN  T  K Q++GK   SST+V+ E+ SN+PLSREQ+K
Subjt:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLSREQMK

Query:  EIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK
        +IFK +DS+ DGFLNI E+TKAF F GSI PF KA Y +   DAN DGLISE+EL++LIDY   ++KKK
Subjt:  EIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK

XP_023538534.1 putative calmodulin-like protein 6 isoform X1 [Cucurbita pepo subsp. pepo]1.1e-3148.52Show/hide
Query:  SFAQYEAIKLIRKNDRDKDGLYIPSS-QASVEFGKGEF---GKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLSREQMK
        ++A+ EA +L++K D + DG+      Q  +   +G       +   S+IPKA+N ++ K  SN   K K Q++ K K SST+ +    S + LSREQMK
Subjt:  SFAQYEAIKLIRKNDRDKDGLYIPSS-QASVEFGKGEF---GKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLSREQMK

Query:  EIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK
        EIFK HDSN DGFL+I E+TKAF F GSI+PFNKAHY +   D N DGLISE ELD+LIDY S  + KK
Subjt:  EIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK

XP_038886759.1 probable calcium-binding protein CML11 [Benincasa hispida]3.0e-3450Show/hide
Query:  SHLQASFAQYEAIKLIRKNDRDKDGL--------YIPSSQASVEFGKGEFGKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSN
        S LQA +A+ EA +LI+K DR+ DG+        ++  + +S +         R    IPK NN ++ KL SN     K QL  K +NSST+ +  + SN
Subjt:  SHLQASFAQYEAIKLIRKNDRDKDGL--------YIPSSQASVEFGKGEFGKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSN

Query:  MPLSREQMKEIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK
        +P SREQ+KEIFK HDSN DGFLNI E+TK F   GS+IPF KAHY +A  DA+KDGLISE+ELD+LIDYT+ ++KKK
Subjt:  MPLSREQMKEIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK

TrEMBL top hitse value%identityAlignment
A0A6J1GHU7 uncharacterized protein LOC111454074 isoform X15.1e-3249.7Show/hide
Query:  AQYEAIKLIRKNDRDKDGLYIPSS-QASVEFGKGEF---GKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLSREQMKEI
        A+ EA +L++K D + DG+      Q  +   +G       +   S+IPKA+N +  K  SN   K K Q++ K K SST+ +    S + LSREQMKEI
Subjt:  AQYEAIKLIRKNDRDKDGLYIPSS-QASVEFGKGEF---GKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLSREQMKEI

Query:  FKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK
        FK HDSN DGFL+I E+TKAF F GSI+PFNKAHY +A  D N DGLISE ELD+LIDY S  + KK
Subjt:  FKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK

A0A6J1GII5 probable calcium-binding protein CML113.0e-3248.85Show/hide
Query:  SHLQASFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLS
        S LQA +A+ +A +LI+K D++ DG+ +   +  V      G  +   +   S+IP+ N++   KL SNP T  K Q++ KA  SST+V+ E+ SN+PLS
Subjt:  SHLQASFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLS

Query:  REQMKEIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK
        REQ+K+IFK +DS+ DGFLNI E+TKAF F GSI PF KA Y +   DAN DGLISE EL++LIDY   ++KKK
Subjt:  REQMKEIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK

A0A6J1GIQ8 probable calcium-binding protein CML118.7e-3248.85Show/hide
Query:  SHLQASFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLS
        S LQA +A+ EA +L++K DR+ DG+ +   +  V      G  +   +R  S+IPK N++   +L SN  T  K Q++G A  SST+V+ E+ SN+PLS
Subjt:  SHLQASFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLS

Query:  REQMKEIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK
        REQ+K+IFK +DS+ DGFLN  E+TKAF F GSI PF KA Y +   DAN DGLISE EL++LIDY   ++KKK
Subjt:  REQMKEIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK

A0A6J1GJT8 probable calcium-binding protein CML113.9e-3247.93Show/hide
Query:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLSREQMK
        ++A+ EA +L++K DR+ DG+ +   +  V      G  +   +   S+IPK N++   +L SN  T  K Q++GK   SST+V+ E+ SN+PLSREQ+K
Subjt:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEF----GKGEFGKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLSREQMK

Query:  EIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK
        +IFK +DS+ DGFLNI E+TKAF F GSI PF KA Y +   DAN DGLISE+EL++LIDY   ++KKK
Subjt:  EIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK

A0A6J1KUA8 calcium-binding protein H-like isoform X11.5e-3148.52Show/hide
Query:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEFGKGEFGKERTPS-----RIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLSREQM
        ++A+ EA +L++K D + DG+ +   +  V   K    K+   +     +IPKANN +  +  SN   K K Q++ K K SST+      S + LSREQM
Subjt:  SFAQYEAIKLIRKNDRDKDGLYIPSSQASVEFGKGEFGKERTPS-----RIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLSREQM

Query:  KEIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKK
        KEIFK HDSN DGFL+I E+TKAF F GSI+PFNKAHY +A  D N DGLISE ELD+LIDY S  + K
Subjt:  KEIFKQHDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACATCAATTCCCACCTTCAAGCTTCATTTGCCCAATATGAAGCAATTAAATTGATAAGGAAGAATGATAGAGACAAGGATGGTCTTTACATTCCCTCTTCTCAAGC
TTCGGTTGAATTCGGCAAAGGAGAATTTGGCAAAGAAAGAACTCCGTCGAGAATTCCGAAAGCTAACAACGAAATTCTACCCAAACTTGGTTCGAATCCTCTCACAAAAT
TGAAAGATCAATTAGAGGGCAAGGCTAAAAACTCTTCAACGAGGGTTGTCTTAGAAAGAACATCTAATATGCCACTTAGCAGGGAGCAAATGAAGGAAATTTTCAAACAA
CATGATAGCAATAATGATGGTTTCTTGAACATATGGGAGATAACAAAAGCATTTTATTTTTTTGGCTCAATTATTCCATTCAACAAAGCTCATTATGGTTTGGCCCTTGG
AGATGCCAATAAAGATGGCCTTATAAGTGAAATTGAACTTGACCAACTAATCGATTACACAAGTATGGTCATGAAGAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCACATCAATTCCCACCTTCAAGCTTCATTTGCCCAATATGAAGCAATTAAATTGATAAGGAAGAATGATAGAGACAAGGATGGTCTTTACATTCCCTCTTCTCAAGC
TTCGGTTGAATTCGGCAAAGGAGAATTTGGCAAAGAAAGAACTCCGTCGAGAATTCCGAAAGCTAACAACGAAATTCTACCCAAACTTGGTTCGAATCCTCTCACAAAAT
TGAAAGATCAATTAGAGGGCAAGGCTAAAAACTCTTCAACGAGGGTTGTCTTAGAAAGAACATCTAATATGCCACTTAGCAGGGAGCAAATGAAGGAAATTTTCAAACAA
CATGATAGCAATAATGATGGTTTCTTGAACATATGGGAGATAACAAAAGCATTTTATTTTTTTGGCTCAATTATTCCATTCAACAAAGCTCATTATGGTTTGGCCCTTGG
AGATGCCAATAAAGATGGCCTTATAAGTGAAATTGAACTTGACCAACTAATCGATTACACAAGTATGGTCATGAAGAAGAAATAG
Protein sequenceShow/hide protein sequence
MHINSHLQASFAQYEAIKLIRKNDRDKDGLYIPSSQASVEFGKGEFGKERTPSRIPKANNEILPKLGSNPLTKLKDQLEGKAKNSSTRVVLERTSNMPLSREQMKEIFKQ
HDSNNDGFLNIWEITKAFYFFGSIIPFNKAHYGLALGDANKDGLISEIELDQLIDYTSMVMKKK