; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004979 (gene) of Chayote v1 genome

Gene IDSed0004979
OrganismSechium edule (Chayote v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationLG01:10540705..10541778
RNA-Seq ExpressionSed0004979
SyntenySed0004979
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain
IPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056890.1 aminoacyl-tRNA ligase [Cucumis melo var. makuwa]6.7e-6543.47Show/hide
Query:  MEKDITALEESTETLLKKLQENKHTTEEEAKPT----------GEQAAIP-----GRM--LEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALC
        ME  + AL+   + +  +   N  TT +    T          G Q  +P      RM  LE P+FDGTD+  WILKMER F+ H +DD AR +D I LC
Subjt:  MEKDITALEESTETLLKKLQENKHTTEEEAKPT----------GEQAAIP-----GRM--LEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALC

Query:  MSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILE
        MSGQAL WFR  QN    P+SW EFR +L+ RF     +  +F  L+Q+G+V EYCS+FE  G+LLP++   +LEAKFMNGL   IR +VR+  PKDIL+
Subjt:  MSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILE

Query:  IMETARLVEDKNAAAMNPAVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKIHDTTFSV
        IM  ARL E KN  A+N         + K + T+  R+V+VKV S    N IS+ LA +LKL +D  G  + V GS     G+ I RGV L+I + T+  
Subjt:  IMETARLVEDKNAAAMNPAVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKIHDTTFSV

Query:  DCSPVKIEGNFEVILGKSW---LRPMQVDWKARTMKMDLGERTVTFQGDPSL
        D  P+++  + EVILG  W   L  M+VDWK   MK+ +G+ TVT + DP L
Subjt:  DCSPVKIEGNFEVILGKSW---LRPMQVDWKARTMKMDLGERTVTFQGDPSL

KAE8652678.1 hypothetical protein Csa_013756 [Cucumis sativus]2.5e-6748.63Show/hide
Query:  LEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTMYERFTALQQDGTVREYCSQFE
        LE P+FDGTD+  WILKMER F+ H +DD A+ ++ I LCMSGQAL WFR  QN  + P+SWGEFR +L++RF  G  +  RF  LQQ+G+V EYCS+FE
Subjt:  LEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTMYERFTALQQDGTVREYCSQFE

Query:  LYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILEIMETARLVEDKNAAAMNPAVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMEL
          G+LLP++   ++EAKFMNGL   IR EVR+   + IL+IM  ARL E KN  A N         + K + T+  R+VVVKV S    N IS+ LA +L
Subjt:  LYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILEIMETARLVEDKNAAAMNPAVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMEL

Query:  KLPVDNCGTGNFVFGSGET-----IFRGVPLKIHDTTFSVDCSPVKIEGNFEVILGKSW---LRPMQVDWKARTMKMDLGERTVTFQGDPSL
        KL +D  G  + V GSG+T     I RGV L+I + T++ D  P+++  + EVILG  W   L  M+VDWK  TMK+++G+  VT + DPSL
Subjt:  KLPVDNCGTGNFVFGSGET-----IFRGVPLKIHDTTFSVDCSPVKIEGNFEVILGKSW---LRPMQVDWKARTMKMDLGERTVTFQGDPSL

KAF7812804.1 Retrotransposable element Tf2 [Senna tora]1.6e-3728.95Show/hide
Query:  SEMKTKSKYVRLKIRKFRKDPTMEKD-ITALEESTETLLKKL------------------QENKHTTE-----EEAKPTGEQAAIPGRMLEFPLFDGTDS
        + M+++ + V  +IR FR+D T  K+ +  ++++ E L +K+                  ++ K + E     +E +   +  +   R LE PLFDG D+
Subjt:  SEMKTKSKYVRLKIRKFRKDPTMEKD-ITALEESTETLLKKL------------------QENKHTTE-----EEAKPTGEQAAIPGRMLEFPLFDGTDS

Query:  PTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGD--TMYERFTALQQDGTVREYCSQFELYGSLLPDI
          W+ ++ER F  + M D  + ++ +A+C+ G+AL W + ++ R  + ++W +F+  L  RF        YE   AL+Q G+  EY  +FEL  + L D 
Subjt:  PTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGD--TMYERFTALQQDGTVREYCSQFELYGSLLPDI

Query:  PDSILEAKFMNGLDALIRAEVRVFRPKDILEIMETARLVEDKN---------------------AAAMNP------------AVGGTSWTTMKLRATING
        P+ +L + F+NGL   +RAE+R+ R +++LE+++ A  VED+N                         NP            + G T   TMKL   I G
Subjt:  PDSILEAKFMNGLDALIRAEVRVFRPKDILEIMETARLVEDKN---------------------AAAMNP------------AVGGTSWTTMKLRATING

Query:  RAVVVKVDSGATDNFISRKLAMELKLPVDN-------CGTGNFVFGSGETIFRGVPLKIHDTTFSVDCSPVKIEGNFEVILGKSWLRPM---QVDWKART
        + V++ +DSGA+ NFIS  L  +L LP +N        G G+ V G G  I RG+ +++       +     + G  +VILG  WL  +    V+W+  T
Subjt:  RAVVVKVDSGATDNFISRKLAMELKLPVDN-------CGTGNFVFGSGETIFRGVPLKIHDTTFSVDCSPVKIEGNFEVILGKSWLRPM---QVDWKART

Query:  MKMDLGERTVTFQGDPSL
        M+    E+ +  +GD SL
Subjt:  MKMDLGERTVTFQGDPSL

TYK06549.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]2.0e-3730.64Show/hide
Query:  ENKHTTEEEAKPTGEQAAIPGRMLEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGG-
        E K  TEE A    +      + +E P+F G D  +W+ + ER FQ H + D  + + +  +   G AL W+RS + R     SW   +  L  RF    
Subjt:  ENKHTTEEEAKPTGEQAAIPGRMLEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGG-

Query:  -DTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILEIMETARLVE----DKNAAAMNPAVGG---------
         + + ERF  ++Q+ TV +Y + F+   + L D+PD +++  FMNGL   IRAEVR+ RPK + E+ME A+LVE    ++N   +N   GG         
Subjt:  -DTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILEIMETARLVE----DKNAAAMNPAVGG---------

Query:  -----------------------------TSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKI
                                         TMK++  I  R V++ +D GAT NFIS KL   L+LPV   G    + GS     G+ I   V +++
Subjt:  -----------------------------TSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKI

Query:  HDTTFSVDCSPVKIEGNFEVILGKSWLRPM---QVDWKARTMKMDLGERTVTFQGDPSL
         +     +  P+++ G  +V+LG  WL  +    VDWK  T+      + ++ +GDPSL
Subjt:  HDTTFSVDCSPVKIEGNFEVILGKSWLRPM---QVDWKARTMKMDLGERTVTFQGDPSL

XP_016900762.1 PREDICTED: uncharacterized protein LOC107991016 [Cucumis melo]1.7e-6043.32Show/hide
Query:  MEKDITALEESTETLLKKLQENKHTTEEEAKPT----------GEQAAIP-----GRM--LEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALC
        ME  + AL+   + +  +   N  TT +    T          G Q  +P      RM  LE P+FDGTD+  WILKMER F+ H +DD AR +D I LC
Subjt:  MEKDITALEESTETLLKKLQENKHTTEEEAKPT----------GEQAAIP-----GRM--LEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALC

Query:  MSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILE
        MSGQAL WFR  QN    P+SW EFR +L+ RF     +  +F  L+Q+G+V EYCS+FE  G+LLP++   +LEAKFMNGL   IR +VR+  PKDIL+
Subjt:  MSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILE

Query:  IMETARLVEDKNAAAMNPAVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKIHDTTFSV
        IM  ARL E KN  A+N         + K + T+  R+V+VKV S    N IS+ LA +LKL +D  G  + V GS     G+ I RGV L+I + T+  
Subjt:  IMETARLVEDKNAAAMNPAVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKIHDTTFSV

Query:  DCSPVKIEGNFEVILGKSW---LRPMQVDWKARTMKM
        D  P+++  + EVILG  W   L  M+VDWK   MK+
Subjt:  DCSPVKIEGNFEVILGKSW---LRPMQVDWKARTMKM

TrEMBL top hitse value%identityAlignment
A0A0A0LUB3 Retrotrans_gag domain-containing protein1.7e-4255.41Show/hide
Query:  LEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTMYERFTALQQDGTVREYCSQFE
        LE P+FDGTD+  WILKMER F+ H +DD A+ ++ I LCMSGQAL WFR  QN  + P+SWGEFR +L++RF  G  +  RF  LQQ+G+V EYCS+FE
Subjt:  LEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTMYERFTALQQDGTVREYCSQFE

Query:  LYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILEIMETARLVEDKNAAAMN
          G+LLP++   ++EAKFMNGL   IR EVR+   + IL+IM  ARL E KN  A N
Subjt:  LYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILEIMETARLVEDKNAAAMN

A0A1S4DXQ7 uncharacterized protein LOC1079910168.3e-6143.32Show/hide
Query:  MEKDITALEESTETLLKKLQENKHTTEEEAKPT----------GEQAAIP-----GRM--LEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALC
        ME  + AL+   + +  +   N  TT +    T          G Q  +P      RM  LE P+FDGTD+  WILKMER F+ H +DD AR +D I LC
Subjt:  MEKDITALEESTETLLKKLQENKHTTEEEAKPT----------GEQAAIP-----GRM--LEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALC

Query:  MSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILE
        MSGQAL WFR  QN    P+SW EFR +L+ RF     +  +F  L+Q+G+V EYCS+FE  G+LLP++   +LEAKFMNGL   IR +VR+  PKDIL+
Subjt:  MSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILE

Query:  IMETARLVEDKNAAAMNPAVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKIHDTTFSV
        IM  ARL E KN  A+N         + K + T+  R+V+VKV S    N IS+ LA +LKL +D  G  + V GS     G+ I RGV L+I + T+  
Subjt:  IMETARLVEDKNAAAMNPAVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKIHDTTFSV

Query:  DCSPVKIEGNFEVILGKSW---LRPMQVDWKARTMKM
        D  P+++  + EVILG  W   L  M+VDWK   MK+
Subjt:  DCSPVKIEGNFEVILGKSW---LRPMQVDWKARTMKM

A0A5A7T6B1 Transposon Ty3-G Gag-Pol polyprotein1.7e-3730.64Show/hide
Query:  ENKHTTEEEAKPTGEQAAIPGRMLEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGG-
        E K  TEE A    +      + +E P+F G D  +W+ + ER FQ H + D  + + +  +   G AL W+RS + R     SW   +  L  RF    
Subjt:  ENKHTTEEEAKPTGEQAAIPGRMLEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGG-

Query:  -DTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILEIMETARLVE----DKNAAAMNPAVGG---------
         + + ERF  ++Q+ TV +Y + F+   + L D+PD +++  FMNGL   IRAEVR+ RPK + E+ME A+LVE    ++N   +N   GG         
Subjt:  -DTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILEIMETARLVE----DKNAAAMNPAVGG---------

Query:  -----------------------------TSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKI
                                         TMK++  I  R V++ +D GAT NFIS KL   L+LPV   G    + GS     G+ I   V +++
Subjt:  -----------------------------TSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKI

Query:  HDTTFSVDCSPVKIEGNFEVILGKSWLRPM---QVDWKARTMKMDLGERTVTFQGDPSL
         +     +  P+++ G  +V+LG  WL  +    VDWK  T+      + +  +GDPSL
Subjt:  HDTTFSVDCSPVKIEGNFEVILGKSWLRPM---QVDWKARTMKMDLGERTVTFQGDPSL

A0A5D3BJD9 Aminoacyl-tRNA ligase3.2e-6543.47Show/hide
Query:  MEKDITALEESTETLLKKLQENKHTTEEEAKPT----------GEQAAIP-----GRM--LEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALC
        ME  + AL+   + +  +   N  TT +    T          G Q  +P      RM  LE P+FDGTD+  WILKMER F+ H +DD AR +D I LC
Subjt:  MEKDITALEESTETLLKKLQENKHTTEEEAKPT----------GEQAAIP-----GRM--LEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALC

Query:  MSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILE
        MSGQAL WFR  QN    P+SW EFR +L+ RF     +  +F  L+Q+G+V EYCS+FE  G+LLP++   +LEAKFMNGL   IR +VR+  PKDIL+
Subjt:  MSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILE

Query:  IMETARLVEDKNAAAMNPAVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKIHDTTFSV
        IM  ARL E KN  A+N         + K + T+  R+V+VKV S    N IS+ LA +LKL +D  G  + V GS     G+ I RGV L+I + T+  
Subjt:  IMETARLVEDKNAAAMNPAVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKIHDTTFSV

Query:  DCSPVKIEGNFEVILGKSW---LRPMQVDWKARTMKMDLGERTVTFQGDPSL
        D  P+++  + EVILG  W   L  M+VDWK   MK+ +G+ TVT + DP L
Subjt:  DCSPVKIEGNFEVILGKSW---LRPMQVDWKARTMKMDLGERTVTFQGDPSL

A0A5D3C860 Transposon Tf2-1 polyprotein isoform X19.8e-3830.64Show/hide
Query:  ENKHTTEEEAKPTGEQAAIPGRMLEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGG-
        E K  TEE A    +      + +E P+F G D  +W+ + ER FQ H + D  + + +  +   G AL W+RS + R     SW   +  L  RF    
Subjt:  ENKHTTEEEAKPTGEQAAIPGRMLEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGG-

Query:  -DTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILEIMETARLVE----DKNAAAMNPAVGG---------
         + + ERF  ++Q+ TV +Y + F+   + L D+PD +++  FMNGL   IRAEVR+ RPK + E+ME A+LVE    ++N   +N   GG         
Subjt:  -DTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILEIMETARLVE----DKNAAAMNPAVGG---------

Query:  -----------------------------TSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKI
                                         TMK++  I  R V++ +D GAT NFIS KL   L+LPV   G    + GS     G+ I   V +++
Subjt:  -----------------------------TSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGS-----GETIFRGVPLKI

Query:  HDTTFSVDCSPVKIEGNFEVILGKSWLRPM---QVDWKARTMKMDLGERTVTFQGDPSL
         +     +  P+++ G  +V+LG  WL  +    VDWK  T+      + ++ +GDPSL
Subjt:  HDTTFSVDCSPVKIEGNFEVILGKSWLRPM---QVDWKARTMKMDLGERTVTFQGDPSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67020.1 unknown protein8.9e-0735.06Show/hide
Query:  RMLEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLP-KSWGEFRRALFERFE
        R +E P+FDG+    W  K+ER F+     D +  +D++AL + G AL WF  L+  + L  + W  F + L  RF+
Subjt:  RMLEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDIIALCMSGQALPWFRSLQNRNHLP-KSWGEFRRALFERFE

AT3G29750.1 Eukaryotic aspartyl protease family protein1.0e-1023.5Show/hide
Query:  FTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDI------------LEIMETARLVEDKNAAAMNP------------
        ++ +QQ+G+VR+Y  +FE        +P    E  F+ GL   ++  VR  +P  I            L +++    V  K    +N             
Subjt:  FTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDI------------LEIMETARLVEDKNAAAMNP------------

Query:  ------AVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGSGETI-----FRGVPLKIHDTTFSVDCSPVKI-EGNF
               +  T    M+    I    VVV +DSGATDNFI  +LA  LKLP       + + G  + I       G+ L + +   + +   + + + + 
Subjt:  ------AVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGSGETI-----FRGVPLKIHDTTFSVDCSPVKI-EGNF

Query:  EVILGKSWLRPM---QVDWKARTMKMDLGERTVT
        +VILG  WL  +    V+W+ +       ++ +T
Subjt:  EVILGKSWLRPM---QVDWKARTMKMDLGERTVT

AT3G30770.1 Eukaryotic aspartyl protease family protein2.2e-0528.47Show/hide
Query:  ILEIMETARLVEDKNAAAMNPAVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGSGETIFRGVPLKIHDTTFSVD-
        +LE  +T R V+ ++          T    M+    I+   VVV +DSGAT+NFIS +LA+ LKLP       + + G  + I      +   T F ++ 
Subjt:  ILEIMETARLVEDKNAAAMNPAVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGSGETIFRGVPLKIHDTTFSVD-

Query:  -CSPVKIEGNF----------EVILGKSWLRPMQVDW
            V+I  NF          +VILG    + ++  W
Subjt:  -CSPVKIEGNF----------EVILGKSWLRPMQVDW

AT3G42723.1 aminoacyl-tRNA ligases;ATP binding;nucleotide binding6.6e-1031.75Show/hide
Query:  IDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTM----YERFTALQQDGTVREYCSQFE--LYGSLLPDIPDSILEAKFMNGLDALIR
        + I+   + G    W + L  +N  P SW EF+  +    E   TM       ++ +QQ+G+VREY  +FE    GS++  +P   LEA F+ GL   ++
Subjt:  IDIIALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTM----YERFTALQQDGTVREYCSQFE--LYGSLLPDIPDSILEAKFMNGLDALIR

Query:  AEVRVFRPKDILEIMETARLVEDKNA
          VR  +P  I+++M+TA+ +E+ N+
Subjt:  AEVRVFRPKDILEIMETARLVEDKNA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGTCTTCTTCCAGATCCATCTGAAATGAAAACGAAGTCGAAATATGTTAGACTTAAAATTCGTAAATTTCGTAAGGATCCAACAATGGAGAAGGACATCACGGC
TCTGGAGGAATCCACTGAAACACTGCTCAAGAAACTGCAAGAAAACAAACACACCACCGAAGAAGAAGCCAAACCCACCGGCGAACAAGCCGCCATACCCGGCCGGATGC
TGGAGTTTCCCCTCTTCGACGGAACCGACTCGCCCACCTGGATCTTGAAAATGGAACGCCTCTTCCAATATCACGCCATGGACGACTTTGCCAGGACGATCGACATCATC
GCACTCTGTATGTCCGGCCAAGCCCTACCCTGGTTCCGATCCCTCCAAAATCGGAACCATCTGCCCAAATCATGGGGGGAGTTCCGGCGTGCTCTGTTTGAGCGATTTGA
AGGCGGCGACACCATGTATGAGAGGTTCACTGCGTTGCAGCAAGATGGGACCGTGAGGGAGTATTGCAGCCAGTTCGAGCTCTACGGGTCGCTCCTTCCAGACATTCCTG
ACTCCATCCTTGAGGCTAAGTTTATGAACGGCTTAGACGCTCTGATTCGAGCCGAGGTTCGGGTGTTTCGGCCCAAAGACATACTGGAAATTATGGAAACGGCTAGGTTG
GTGGAAGATAAGAACGCTGCGGCGATGAACCCCGCCGTCGGGGGTACATCGTGGACAACCATGAAGCTTAGAGCCACGATCAACGGTAGGGCTGTGGTTGTTAAGGTCGA
CAGTGGGGCAACCGATAATTTCATATCTCGAAAGTTGGCTATGGAATTGAAGCTCCCAGTGGACAACTGCGGCACCGGCAATTTTGTTTTCGGTTCCGGGGAAACGATCT
TTCGTGGTGTTCCGCTGAAAATCCATGATACAACCTTTTCCGTGGACTGTTCTCCGGTTAAAATAGAAGGGAATTTTGAGGTTATATTGGGAAAGTCGTGGCTGCGTCCC
ATGCAAGTTGATTGGAAAGCTCGAACAATGAAGATGGATTTGGGGGAAAGGACTGTAACATTTCAGGGAGACCCATCTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGTCTTCTTCCAGATCCATCTGAAATGAAAACGAAGTCGAAATATGTTAGACTTAAAATTCGTAAATTTCGTAAGGATCCAACAATGGAGAAGGACATCACGGC
TCTGGAGGAATCCACTGAAACACTGCTCAAGAAACTGCAAGAAAACAAACACACCACCGAAGAAGAAGCCAAACCCACCGGCGAACAAGCCGCCATACCCGGCCGGATGC
TGGAGTTTCCCCTCTTCGACGGAACCGACTCGCCCACCTGGATCTTGAAAATGGAACGCCTCTTCCAATATCACGCCATGGACGACTTTGCCAGGACGATCGACATCATC
GCACTCTGTATGTCCGGCCAAGCCCTACCCTGGTTCCGATCCCTCCAAAATCGGAACCATCTGCCCAAATCATGGGGGGAGTTCCGGCGTGCTCTGTTTGAGCGATTTGA
AGGCGGCGACACCATGTATGAGAGGTTCACTGCGTTGCAGCAAGATGGGACCGTGAGGGAGTATTGCAGCCAGTTCGAGCTCTACGGGTCGCTCCTTCCAGACATTCCTG
ACTCCATCCTTGAGGCTAAGTTTATGAACGGCTTAGACGCTCTGATTCGAGCCGAGGTTCGGGTGTTTCGGCCCAAAGACATACTGGAAATTATGGAAACGGCTAGGTTG
GTGGAAGATAAGAACGCTGCGGCGATGAACCCCGCCGTCGGGGGTACATCGTGGACAACCATGAAGCTTAGAGCCACGATCAACGGTAGGGCTGTGGTTGTTAAGGTCGA
CAGTGGGGCAACCGATAATTTCATATCTCGAAAGTTGGCTATGGAATTGAAGCTCCCAGTGGACAACTGCGGCACCGGCAATTTTGTTTTCGGTTCCGGGGAAACGATCT
TTCGTGGTGTTCCGCTGAAAATCCATGATACAACCTTTTCCGTGGACTGTTCTCCGGTTAAAATAGAAGGGAATTTTGAGGTTATATTGGGAAAGTCGTGGCTGCGTCCC
ATGCAAGTTGATTGGAAAGCTCGAACAATGAAGATGGATTTGGGGGAAAGGACTGTAACATTTCAGGGAGACCCATCTCTCTGA
Protein sequenceShow/hide protein sequence
MKGLLPDPSEMKTKSKYVRLKIRKFRKDPTMEKDITALEESTETLLKKLQENKHTTEEEAKPTGEQAAIPGRMLEFPLFDGTDSPTWILKMERLFQYHAMDDFARTIDII
ALCMSGQALPWFRSLQNRNHLPKSWGEFRRALFERFEGGDTMYERFTALQQDGTVREYCSQFELYGSLLPDIPDSILEAKFMNGLDALIRAEVRVFRPKDILEIMETARL
VEDKNAAAMNPAVGGTSWTTMKLRATINGRAVVVKVDSGATDNFISRKLAMELKLPVDNCGTGNFVFGSGETIFRGVPLKIHDTTFSVDCSPVKIEGNFEVILGKSWLRP
MQVDWKARTMKMDLGERTVTFQGDPSL