; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0004998 (gene) of Chayote v1 genome

Gene IDSed0004998
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG14:22098313..22098997
RNA-Seq ExpressionSed0004998
SyntenySed0004998
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]3.6e-2330.89Show/hide
Query:  DSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDSVGDER--------PKIW--
        +   + L  S+  K + N+  N E F+  +   W   N V +E  G NIF+  F+N  ++++ +EGGPW FDK L+V  ++ G E+           W  
Subjt:  DSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDSVGDER--------PKIW--

Query:  ---------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICYGCGKIGHNLR
                        LG  +G+  ++D   +G C G  +R++++ID++ PLKRG+ + +G   +   V   YE+L   CY CGKIGH +R
Subjt:  ---------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICYGCGKIGHNLR

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]7.1e-2731.88Show/hide
Query:  RITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDSV
        ++T EE    ++   + +  A +GL  S+  KL+  R  +A++  R++   W +++ + +ES G+N+F  HF    +  + M+ GPWFFDK LIV +   
Subjt:  RITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDSV

Query:  GDER------------------PKIW-------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICYG
          +                   P  W        LGN IG F+DVD +  G   G  LR++++IDI KPL+RG+ I +       W+   YE+L + CY 
Subjt:  GDER------------------PKIW-------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICYG

Query:  CGKIGHN
        CG IGH+
Subjt:  CGKIGHN

XP_040987632.1 uncharacterized protein LOC121235350 [Juglans microcarpa x Juglans regia]7.3e-2431.4Show/hide
Query:  MRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDS
        +++T+EE+   +E  + ++ S+    ++     +  ++  N   FR  M   W ++  V  +  GRN F    + RD+K++ M+G PW F+K LI  +D 
Subjt:  MRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDS

Query:  VGDERPKI--------W-----------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICY
         G E  K+        W                 +LG  +G  L VD D++G C  + LR+K+MID+ KPL RG  + +G+ +   W+ F YEKL   CY
Subjt:  VGDERPKI--------W-----------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICY

Query:  GCGKIGH
         CGKI H
Subjt:  GCGKIGH

XP_042969110.1 uncharacterized protein LOC122301800 [Carya illinoinensis]4.7e-2328.37Show/hide
Query:  MRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDS
        +++T++E+   +   +  + S N+     ++C +M +R  N    +  + R W ++    I+  GRN F    +N  +K++ M+G PW FDK L+  +D 
Subjt:  MRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDS

Query:  VGDE--------RPKIW-----------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICY
         G          +   W                 ++G+ +G  L VD D++G C G  LR+K+M+D+ KPL RG  + +G  +   W++F YE+L   CY
Subjt:  VGDE--------RPKIW-----------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICY

Query:  GCGKIGHN
         CG+I H+
Subjt:  GCGKIGHN

XP_042983333.1 uncharacterized protein LOC122312736 [Carya illinoinensis]1.2e-2328.37Show/hide
Query:  MRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDS
        +++T++E+   +   D  + S N+     ++C +M +R  N    +  + R W ++    I+  GRN F    +N  +K++ M+G PW FDK L+  +D 
Subjt:  MRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDS

Query:  VGDE--------RPKIW-----------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICY
         G          +   W                 ++G+ +G  L VD D++G C G  LR+K+M+D+ KPL RG  + +G  +   W++F YE+L   CY
Subjt:  VGDE--------RPKIW-----------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICY

Query:  GCGKIGHN
         CG+  H+
Subjt:  GCGKIGHN

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein1.1e-2229.72Show/hide
Query:  NMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFED
        N+ + DE+ +   E  ++ I   +  +   +  K++  +  N E F+ L+ + W+    VE+E  G N F  HF N++ + +    GPW F K LIV E 
Subjt:  NMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFED

Query:  SVG--------------------------DERPKIWSLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEI
          G                          ++R   W L   IG  +++  ++   C G  +RVK+ +DI KPLKR + IK+G   E   VA  YE+L + 
Subjt:  SVG--------------------------DERPKIWSLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEI

Query:  CYGCGKIGHNLR
        C+ CG+IGH++R
Subjt:  CYGCGKIGHNLR

A0A5C7H9Y2 CCHC-type domain-containing protein1.8e-2330.89Show/hide
Query:  DSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDSVGDER--------PKIW--
        +   + L  S+  K + N+  N E F+  +   W   N V +E  G NIF+  F+N  ++++ +EGGPW FDK L+V  ++ G E+           W  
Subjt:  DSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDSVGDER--------PKIW--

Query:  ---------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICYGCGKIGHNLR
                        LG  +G+  ++D   +G C G  +R++++ID++ PLKRG+ + +G   +   V   YE+L   CY CGKIGH +R
Subjt:  ---------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICYGCGKIGHNLR

A0A6J1BSZ1 uncharacterized protein LOC1110054815.1e-2327.15Show/hide
Query:  AEFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLD-NNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWF
        A  + ++  N ++T EE    ++   + ++   + L  S+ CKL+  RS +  + +  +   W LD     ++  G NIF  +F    ++ + +  GPW 
Subjt:  AEFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLD-NNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWF

Query:  FDKGLIVFEDSVGDERP--------KIW-----------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVA
        FD+ LI+ ++ V   +P         +W                  LGN IG F DV+ +AN  C G+ LRV++  D++KPL RG+ + +       W+ 
Subjt:  FDKGLIVFEDSVGDERP--------KIW-----------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVA

Query:  FAYEKLQEICYGCGKIGHNLR
          YE+L +  Y CG++ H L+
Subjt:  FAYEKLQEICYGCGKIGHNLR

A0A6J1DU55 uncharacterized protein LOC1110231353.4e-2731.88Show/hide
Query:  RITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDSV
        ++T EE    ++   + +  A +GL  S+  KL+  R  +A++  R++   W +++ + +ES G+N+F  HF    +  + M+ GPWFFDK LIV +   
Subjt:  RITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFEDSV

Query:  GDER------------------PKIW-------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICYG
          +                   P  W        LGN IG F+DVD +  G   G  LR++++IDI KPL+RG+ I +       W+   YE+L + CY 
Subjt:  GDER------------------PKIW-------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICYG

Query:  CGKIGHN
        CG IGH+
Subjt:  CGKIGHN

A0A803M2D0 Uncharacterized protein1.1e-2230.18Show/hide
Query:  MAEFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRG----LRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEG
        M + +  +   +++ D+E      FG +   S   G    +  S+  KL+  +  NAE  +R++   W +D+NV I S   NIF   F N D++++ +EG
Subjt:  MAEFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRG----LRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEG

Query:  GPWFFDKGLIVFEDSVGDERPK--------IW-----------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMRED
         PW FD  +++ ++   +E+P          W                  +G+ IG  ++VD +++  C    +RVK+++DI KPL+RGM I V S    
Subjt:  GPWFFDKGLIVFEDSVGDERPK--------IW-----------------SLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMRED

Query:  AWVAFAYEKLQEICYGCGKIGH
         W+ F YE+L + CY CG+IGH
Subjt:  AWVAFAYEKLQEICYGCGKIGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G36228.1 nucleic acid binding;zinc ion binding2.7e-0822.01Show/hide
Query:  MPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIV---FEDSVGDE--------------------RPKIWSLGNKIGRFLDVDVDA
        +P +W L   V         FQ  FR+  +    +   PW F++  I    +ED   ++                       +  + + +G  + +D + 
Subjt:  MPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIV---FEDSVGDE--------------------RPKIWSLGNKIGRFLDVDVDA

Query:  NGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICYGCGKIGHNL
            +   +RVK+ +D  +PL+    ++  S RE A + F YEKLQ +C  C ++ H +
Subjt:  NGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICYGCGKIGHNL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGTTCATTCAAGATCAGATGGGTAATATGAGAATTACAGATGAAGAAAAAAGTTGCAGGATCGAATTTGGGGACAACGAAATTGATTCGGCAAATAGAGGTCT
AAGAAATTCGGTTTATTGCAAGTTAATGGTGAATAGATCGACGAACGCAGAAATATTTCGAAGACTCATGCCTCGAAAATGGGATCTGGATAACAATGTGGAAATAGAAT
CATGGGGAAGAAATATTTTTCAATGCCACTTTAGAAACAGAGATGAAAAGCAACAAACAATGGAAGGTGGTCCTTGGTTTTTCGATAAGGGGTTAATAGTTTTCGAGGAC
TCTGTTGGAGATGAACGACCAAAGATATGGAGTTTAGGGAATAAAATTGGCAGGTTCCTAGACGTGGATGTTGATGCTAATGGAAGATGCAGAGGAAATGTTCTTAGAGT
AAAAATTATGATTGATATTCTGAAGCCATTGAAGAGAGGTATGCTTATCAAGGTGGGATCTATGCGTGAGGATGCTTGGGTAGCCTTTGCTTATGAAAAATTACAGGAAA
TATGTTATGGTTGTGGTAAGATTGGTCATAATCTGAGGTTACGTTACAGAAAACCGTCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGTTCATTCAAGATCAGATGGGTAATATGAGAATTACAGATGAAGAAAAAAGTTGCAGGATCGAATTTGGGGACAACGAAATTGATTCGGCAAATAGAGGTCT
AAGAAATTCGGTTTATTGCAAGTTAATGGTGAATAGATCGACGAACGCAGAAATATTTCGAAGACTCATGCCTCGAAAATGGGATCTGGATAACAATGTGGAAATAGAAT
CATGGGGAAGAAATATTTTTCAATGCCACTTTAGAAACAGAGATGAAAAGCAACAAACAATGGAAGGTGGTCCTTGGTTTTTCGATAAGGGGTTAATAGTTTTCGAGGAC
TCTGTTGGAGATGAACGACCAAAGATATGGAGTTTAGGGAATAAAATTGGCAGGTTCCTAGACGTGGATGTTGATGCTAATGGAAGATGCAGAGGAAATGTTCTTAGAGT
AAAAATTATGATTGATATTCTGAAGCCATTGAAGAGAGGTATGCTTATCAAGGTGGGATCTATGCGTGAGGATGCTTGGGTAGCCTTTGCTTATGAAAAATTACAGGAAA
TATGTTATGGTTGTGGTAAGATTGGTCATAATCTGAGGTTACGTTACAGAAAACCGTCATCTTGA
Protein sequenceShow/hide protein sequence
MAEFIQDQMGNMRITDEEKSCRIEFGDNEIDSANRGLRNSVYCKLMVNRSTNAEIFRRLMPRKWDLDNNVEIESWGRNIFQCHFRNRDEKQQTMEGGPWFFDKGLIVFED
SVGDERPKIWSLGNKIGRFLDVDVDANGRCRGNVLRVKIMIDILKPLKRGMLIKVGSMREDAWVAFAYEKLQEICYGCGKIGHNLRLRYRKPSS