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Sed0005005 (gene) of Chayote v1 genome

Gene IDSed0005005
OrganismSechium edule (Chayote v1)
DescriptionCyclin-dependent kinases regulatory subunit
Genome locationLG01:37523785..37525925
RNA-Seq ExpressionSed0005005
SyntenySed0005005
Gene Ontology termsGO:0007346 - regulation of mitotic cell cycle (biological process)
GO:0045737 - positive regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0051301 - cell division (biological process)
GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0016301 - kinase activity (molecular function)
GO:0019901 - protein kinase binding (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
GO:0061575 - cyclin-dependent protein serine/threonine kinase activator activity (molecular function)
InterPro domainsIPR000789 - Cyclin-dependent kinase, regulatory subunit
IPR036858 - Cyclin-dependent kinase, regulatory subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022944260.1 cyclin-dependent kinases regulatory subunit 1-like [Cucurbita moschata]2.6e-4295.51Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK
        MGQIQYSEKYFDD +EYRHVVLPPDVAKLLPKNRLLSENEWRA+GVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVL AK
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK

XP_022957804.1 cyclin-dependent kinases regulatory subunit 1 [Cucurbita moschata]8.1e-4498.88Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK
        MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVL AK
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK

XP_022986411.1 cyclin-dependent kinases regulatory subunit 1-like [Cucurbita maxima]5.8e-4294.38Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK
        MGQIQYSEKYFDD +EYRHVVLPPDVAKLLPKNRLLSENEWRA+GVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQN+L AK
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK

XP_028756892.1 cyclin-dependent kinases regulatory subunit 1 [Prosopis alba]5.8e-4294.38Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK
        MGQIQYSEKYFDDTYEYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQEN AQQN++ AK
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK

XP_038902899.1 cyclin-dependent kinases regulatory subunit 1-like [Benincasa hispida]1.2e-4296.63Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK
        MGQIQYSEKYFDD YEYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVL AK
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK

TrEMBL top hitse value%identityAlignment
A0A059AAM5 Cyclin-dependent kinases regulatory subunit (Fragment)3.7e-4297.67Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVL
        MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQEN AQQN+L
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVL

A0A6J1FYK0 Cyclin-dependent kinases regulatory subunit1.3e-4295.51Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK
        MGQIQYSEKYFDD +EYRHVVLPPDVAKLLPKNRLLSENEWRA+GVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVL AK
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK

A0A6J1H322 Cyclin-dependent kinases regulatory subunit3.9e-4498.88Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK
        MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVL AK
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK

A0A6J1JB14 Cyclin-dependent kinases regulatory subunit2.8e-4294.38Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK
        MGQIQYSEKYFDD +EYRHVVLPPDVAKLLPKNRLLSENEWRA+GVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQN+L AK
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK

A0A6J1K8L9 Cyclin-dependent kinases regulatory subunit3.9e-4498.88Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK
        MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVL AK
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK

SwissProt top hitse value%identityAlignment
A2XCH8 Cyclin-dependent kinases regulatory subunit 11.1e-4095.06Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLA
        MGQIQYSEKYFDDTYEYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN+QQQQE  A
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLA

O23249 Cyclin-dependent kinases regulatory subunit 16.0e-4295.12Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQ
        MGQIQYSEKYFDDT+EYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRPEPHIMLFRRPLNYQQQQEN AQ
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQ

P55933 Probable cyclin-dependent kinases regulatory subunit4.5e-2981.82Show/hide
Query:  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR
        IQYSEKY+DD +EYRHV+LPPDVAK +PKNRLLSE EWR +GVQQS+GWVHYA+HRPEPHI+LFRR
Subjt:  IQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR

Q6PS57 Cyclin-dependent kinases regulatory subunit 11.1e-4095.06Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLA
        MGQIQYSEKYFDDTYEYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN+QQQQE  A
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLA

Q9SJJ5 Cyclin-dependent kinases regulatory subunit 24.0e-3889.74Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQE
        MGQIQYS+KYFDDT+EYRHVVLPP+VAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ+ +
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQE

Arabidopsis top hitse value%identityAlignment
AT2G27960.1 cyclin-dependent kinase-subunit 14.3e-4395.12Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQ
        MGQIQYSEKYFDDT+EYRHVVLPP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRPEPHIMLFRRPLNYQQQQEN AQ
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQ

AT2G27970.1 CDK-subunit 22.9e-3989.74Show/hide
Query:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQE
        MGQIQYS+KYFDDT+EYRHVVLPP+VAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ+ +
Subjt:  MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCAGATTCAGTACTCTGAGAAGTATTTCGACGACACTTACGAGTATAGGCATGTGGTGCTCCCACCCGATGTCGCCAAGTTGCTTCCCAAGAATCGCCTGCTCTC
CGAAAATGAGTGGCGTGCAATTGGAGTTCAGCAGAGTCGAGGGTGGGTGCACTATGCCATTCATCGCCCTGAGCCGCATATCATGCTGTTCAGGAGGCCCCTGAACTACC
AGCAACAGCAGGAAAACCTCGCTCAACAAAACGTGCTTCCTGCTAAATGA
mRNA sequenceShow/hide mRNA sequence
GGGCAGAATCGATTGGGCGACGTTGTAATTCATTGGGTTCCAAATATGAATGGTATATAATTGTGCATTTGGTTGAGTAATGGAGGAACCCTAGAGTTTGAGTATACTGT
TGGGGATTGGTACCATTGAATCTGCTTTGCTTTGTAATTTGTATTCTGTGTGAAAGCCGATTAAGGTAAGGAGTGTTGGATTTATGGGTCAGATTCAGTACTCTGAGAAG
TATTTCGACGACACTTACGAGTATAGGCATGTGGTGCTCCCACCCGATGTCGCCAAGTTGCTTCCCAAGAATCGCCTGCTCTCCGAAAATGAGTGGCGTGCAATTGGAGT
TCAGCAGAGTCGAGGGTGGGTGCACTATGCCATTCATCGCCCTGAGCCGCATATCATGCTGTTCAGGAGGCCCCTGAACTACCAGCAACAGCAGGAAAACCTCGCTCAAC
AAAACGTGCTTCCTGCTAAATGATTGTTTCATTTACCCGTCAATATCCAGTCCTATAACGGTTTTCAAATGAAAAAACTTTATCACTCTCCTGCTATCTGTGGTCAATCC
TCCAGCTTCAAAATATCTGCACGAGTTTCTATGTTTACCTTTAACTCTTTATGATTGTAGAGGTGGCTTATATATATATATATATATATGCTTCTGGATCTTAGCTTGAC
TCTGCAATTCTTTGGATAAACCAAAGATGGGTTTGATGGATCTTCATCCTTGACTTCCTTCCTGTGCGGAGGTGATTTATTTACATGTTTCATGTTTGTGTGACTTCCCA
ATTTTATGATCTTGTTCTGCCCTTTTCTTTTATGAGGCTATAGTGGTTCTATATTATTGCAACGTCCAGAGTTAAGAATTTGCACCCTCTTTCAGGAACTGCTTTTGTTT
ATTTGCTACTGTGGTATAATCAGGCGTCAATCCTTCATGACCATTCTCTGCTGCCAGCCTCCGTTTTCATTCCATCCATCTCAATCTCCCTCCCCCATCCCATCGTTGCC
TGCAATCTCAAACTCAAGACCCATTTTTTGTCCACGATCTGTTGTCCGTACCTTAACTGTCGTCTTCATCCTTCTCCATTTGTTCTTCGCTCATCCTTCGAGCTAGGTGG
ATCATCTTTGTTTCCATTGCCCTGCAAGCTTGTCCCATGACTTTGACGTGCGTGGGGTTTTTCCACACGTGTGAGCTTCGACATTTGATTCTCAGGAACTTTGGTGAATT
TTAGTCCGCAAACTCTGGTGCTTCATCTAAGCTTCAGGCATGACCCACCCAAATAGAATATTTTGGTTTTTTCATTCTTCATCTTCTGTTGCGTTTGATTTCGAGACACA
ATAGTGCTTCATTTTATGTTCTTCATTATCGATATGTGCATTGGGGAGCCGTAGTTGTTTTATCTACAATAACTACTTCTTGATTAAGAATGAGGGGTCTCTTTTTGCTT
GGAAGACTTCACAAAAGGATTGCAACTCCCTTTGTCTTAACTTCACTTCACCTTTGCTGGTTTGTTAATATGTTAGATGTTTTAATTAAATCAAGAAGACCCGTTCATTT
TTTCATCCACAACAATTTATAGACCAAGTTGAATCCGTTGGACTTTGTAAAGTTTGATTGAAAGATGGTTGGATCTCCGAATGTGTGGCTTGGTCTAAATCTGATGGGTG
TTCTTATCACAGTACCTTGGGGTTTTCAGAATCAGGTCAGAAATTGATCAGAAATTTTTTTTAGAGATGTCAAGTCATAAGACCTTTCAAAATTTCAAACTCAGTTGCCT
TTGATGAACATTTGGTTGGAACCATTTTTCCTTCTCCAAATCAATCCTTGTCATAGT
Protein sequenceShow/hide protein sequence
MGQIQYSEKYFDDTYEYRHVVLPPDVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENLAQQNVLPAK